Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 AC108673.2-201ENST00000608909 565 ntBASIC12.92□□□□□ -0.34
THBS1P07996 SELENOW-216ENST00000612212 875 ntTSL 5 BASIC12.92□□□□□ -0.34
THBS1P07996 PLLP-205ENST00000613167 7578 ntTSL 5 BASIC12.92□□□□□ -0.34
THBS1P07996 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC12.92□□□□□ -0.34
THBS1P07996 STXBP1-201ENST00000373299 3765 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 ST6GAL1-201ENST00000169298 4645 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
THBS1P07996 LARP7-202ENST00000344442 2286 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
THBS1P07996 SLC37A4-201ENST00000330775 2102 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
THBS1P07996 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC12.92□□□□□ -0.34
THBS1P07996 ANGPTL2-202ENST00000373425 3707 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 JMJD6-203ENST00000445478 5303 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 MAP7-204ENST00000454590 3119 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
THBS1P07996 AGRN-201ENST00000379370 7323 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 UMODL1-204ENST00000400427 5442 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 EPHA5-203ENST00000432638 3662 ntTSL 5 BASIC12.92□□□□□ -0.34
THBS1P07996 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 ADCY3-202ENST00000405392 4397 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 TRAF3IP3-204ENST00000367026 2058 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 APCDD1L-AS1-203ENST00000427140 2092 ntTSL 2 BASIC12.92□□□□□ -0.34
THBS1P07996 NUP62CL-201ENST00000372466 1755 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 ALOX15B-201ENST00000380173 2605 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC12.91□□□□□ -0.34
THBS1P07996 RER1-207ENST00000488353 2469 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 MRM2-201ENST00000242257 1601 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
THBS1P07996 TNS2-219ENST00000552570 4714 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
THBS1P07996 GALNT3-201ENST00000392701 3868 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 KC6-207ENST00000600644 2311 ntTSL 3 BASIC12.91□□□□□ -0.34
THBS1P07996 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 PID1-202ENST00000392054 2745 ntTSL 2 BASIC12.91□□□□□ -0.34
THBS1P07996 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
THBS1P07996 AC073862.5-201ENST00000624129 2027 ntBASIC12.91□□□□□ -0.34
THBS1P07996 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 RHD-204ENST00000417538 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 TFEB-205ENST00000394283 2595 ntTSL 2 BASIC12.91□□□□□ -0.34
THBS1P07996 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 PIK3R5-219ENST00000616147 4377 ntTSL 5 BASIC12.91□□□□□ -0.34
THBS1P07996 CDH3-201ENST00000264012 4929 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 SELENON-201ENST00000354177 4227 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
THBS1P07996 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 DUSP28-202ENST00000405954 3461 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 PCMTD1-201ENST00000360540 4252 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
THBS1P07996 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 DSN1-203ENST00000373750 2233 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 TNK1-207ENST00000576812 3023 ntAPPRIS ALT1 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 GNAS-215ENST00000371102 3438 ntTSL 5 BASIC12.91□□□□□ -0.34
THBS1P07996 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 NOSIP-201ENST00000339093 1000 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
THBS1P07996 NPPA-202ENST00000376480 855 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 AC010422.1-201ENST00000414548 543 ntTSL 2 BASIC12.91□□□□□ -0.34
THBS1P07996 MFAP3-202ENST00000439768 1186 ntTSL 2 BASIC12.91□□□□□ -0.34
THBS1P07996 AL109924.1-201ENST00000444586 914 ntTSL 3 BASIC12.91□□□□□ -0.34
THBS1P07996 OARD1-204ENST00000464633 717 ntTSL 2 BASIC12.91□□□□□ -0.34
THBS1P07996 AC093904.2-201ENST00000495580 418 ntTSL 3 BASIC12.91□□□□□ -0.34
THBS1P07996 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC12.91□□□□□ -0.34
THBS1P07996 SLC25A15P3-201ENST00000505530 290 ntBASIC12.91□□□□□ -0.34
THBS1P07996 REEP5-207ENST00000513339 1139 ntTSL 2 BASIC12.91□□□□□ -0.34
THBS1P07996 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC12.91□□□□□ -0.34
THBS1P07996 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC12.91□□□□□ -0.34
THBS1P07996 NPPA-203ENST00000610706 849 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
THBS1P07996 NAP1L6-202ENST00000641404 1222 ntBASIC12.91□□□□□ -0.34
THBS1P07996 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 PGM1-202ENST00000371084 2472 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 CD6-201ENST00000313421 3252 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
THBS1P07996 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 TIGD6-201ENST00000296736 4006 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 UBE3A-220ENST00000630424 5075 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
THBS1P07996 PHLDB2-204ENST00000431670 6127 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 CKMT1B-201ENST00000300283 1779 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
THBS1P07996 CKMT1A-204ENST00000434505 1779 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
THBS1P07996 TMEM25-201ENST00000313236 2409 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 C7orf33-201ENST00000307003 1354 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 ABCG8-201ENST00000272286 2665 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 ZNF556-202ENST00000586426 1643 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 DNM1-212ENST00000627543 4734 ntAPPRIS ALT1 TSL 5 BASIC12.91□□□□□ -0.34
THBS1P07996 IKZF1-218ENST00000615491 5637 ntTSL 5 BASIC12.91□□□□□ -0.34
THBS1P07996 VPS9D1-202ENST00000561976 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC12.91□□□□□ -0.34
THBS1P07996 AF013593.1-201ENST00000458074 1487 ntBASIC12.91□□□□□ -0.34
THBS1P07996 MAGEA4-205ENST00000393920 1721 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
THBS1P07996 KRT74-203ENST00000549343 2858 ntTSL 5 BASIC12.91□□□□□ -0.34
THBS1P07996 SCNN1A-201ENST00000228916 3135 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
THBS1P07996 PEG13-201ENST00000631594 5667 ntBASIC12.91□□□□□ -0.34
THBS1P07996 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.9□□□□□ -0.34
THBS1P07996 USH1C-201ENST00000005226 2700 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
THBS1P07996 SLC20A2-208ENST00000520262 2992 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
THBS1P07996 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.9□□□□□ -0.34
THBS1P07996 ARPC1A-201ENST00000262942 1565 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
THBS1P07996 TSPAN31-201ENST00000257910 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 69.1 ms