Protein–RNA interactions for Protein: P01562

IFNA1, Interferon alpha-1/13, humanhuman

Predictions only

Length 189 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IFNA1P01562 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 UROC1-201ENST00000290868 3149 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC11.07□□□□□ -0.64
IFNA1P01562 RPL13-204ENST00000452368 1455 ntTSL 2 BASIC11.07□□□□□ -0.64
IFNA1P01562 SLC41A3-211ENST00000508835 1480 ntTSL 2 BASIC11.07□□□□□ -0.64
IFNA1P01562 RHBDL3-203ENST00000536287 4470 ntTSL 2 BASIC11.07□□□□□ -0.64
IFNA1P01562 S1PR1-201ENST00000305352 2909 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 ZNF259P1-201ENST00000407656 1365 ntBASIC11.07□□□□□ -0.64
IFNA1P01562 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC11.07□□□□□ -0.64
IFNA1P01562 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 CPNE2-204ENST00000565874 1976 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 SPTBN1-202ENST00000356805 8482 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 ZNF473-203ENST00000445728 2833 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
IFNA1P01562 BACH2-210ENST00000537989 9108 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 CCDC97-201ENST00000269967 3322 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 LAIR1-204ENST00000391743 2735 ntAPPRIS ALT2 TSL 2 BASIC11.07□□□□□ -0.64
IFNA1P01562 SPCS1-201ENST00000233025 1082 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 C2orf40-201ENST00000238044 789 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 LSM1-201ENST00000311351 1147 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 LRRC30-201ENST00000383467 923 ntAPPRIS P1 BASIC11.07□□□□□ -0.64
IFNA1P01562 HFE-208ENST00000397022 1280 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 FGFR1-207ENST00000397103 2953 ntTSL 5 BASIC11.07□□□□□ -0.64
IFNA1P01562 LINC00404-201ENST00000418660 428 ntTSL 2 BASIC11.07□□□□□ -0.64
IFNA1P01562 GAS5-209ENST00000430245 723 ntTSL 3 BASIC11.07□□□□□ -0.64
IFNA1P01562 PTPA-215ENST00000432124 567 ntTSL 4 BASIC11.07□□□□□ -0.64
IFNA1P01562 AC093459.1-202ENST00000438963 768 ntTSL 3 BASIC11.07□□□□□ -0.64
IFNA1P01562 MRAS-205ENST00000474559 856 ntAPPRIS P1 TSL 3 BASIC11.07□□□□□ -0.64
IFNA1P01562 HFE-214ENST00000488199 781 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
IFNA1P01562 IGHVIII-5-2-201ENST00000522505 261 ntBASIC11.07□□□□□ -0.64
IFNA1P01562 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC11.07□□□□□ -0.64
IFNA1P01562 PLEKHA7-214ENST00000532079 565 ntTSL 5 BASIC11.07□□□□□ -0.64
IFNA1P01562 AC103808.2-201ENST00000582755 594 ntTSL 4 BASIC11.07□□□□□ -0.64
IFNA1P01562 AC055811.1-201ENST00000584203 1231 ntTSL 5 BASIC11.07□□□□□ -0.64
IFNA1P01562 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC11.07□□□□□ -0.64
IFNA1P01562 AC022145.2-201ENST00000598203 171 ntBASIC11.07□□□□□ -0.64
IFNA1P01562 AC011495.2-201ENST00000600665 360 ntTSL 5 BASIC11.07□□□□□ -0.64
IFNA1P01562 AC104692.2-201ENST00000603054 253 ntBASIC11.07□□□□□ -0.64
IFNA1P01562 RPP40-207ENST00000618533 1056 ntTSL 5 BASIC11.07□□□□□ -0.64
IFNA1P01562 CAND2-206ENST00000626378 333 ntTSL 5 BASIC11.07□□□□□ -0.64
IFNA1P01562 KCNH1-205ENST00000638498 3479 ntTSL 5 BASIC11.07□□□□□ -0.64
IFNA1P01562 THBS1-201ENST00000260356 7775 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 ASPH-208ENST00000517856 6337 ntTSL 2 BASIC11.07□□□□□ -0.64
IFNA1P01562 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 GUCY1B3-202ENST00000502959 2255 ntTSL 2 BASIC11.07□□□□□ -0.64
IFNA1P01562 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
IFNA1P01562 FAM200B-223ENST00000622362 4377 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 IMMT-204ENST00000410111 3001 ntAPPRIS P4 TSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 DTD2-202ENST00000356180 1400 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC11.07□□□□□ -0.64
IFNA1P01562 NIPAL3-202ENST00000339255 1676 ntTSL 5 BASIC11.07□□□□□ -0.64
IFNA1P01562 NOS2P2-202ENST00000639528 1659 ntTSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 GUCY2EP-203ENST00000531117 1918 ntBASIC11.07□□□□□ -0.64
IFNA1P01562 LPGAT1-202ENST00000366997 7782 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC11.07□□□□□ -0.64
IFNA1P01562 IDS-201ENST00000340855 7619 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 C8orf76-201ENST00000276704 1341 ntAPPRIS P1 TSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 OTOG-203ENST00000399397 9948 ntAPPRIS P3 TSL 5 BASIC11.07□□□□□ -0.64
IFNA1P01562 L3MBTL1-203ENST00000373135 3218 ntAPPRIS P3 TSL 1 (best) BASIC11.07□□□□□ -0.64
IFNA1P01562 DPH2-202ENST00000396758 1738 ntTSL 3 BASIC11.06□□□□□ -0.64
IFNA1P01562 ENTPD3-204ENST00000456402 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC11.06□□□□□ -0.64
IFNA1P01562 KLK6-203ENST00000391808 1478 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 POLL-202ENST00000339310 2289 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 MPP4-203ENST00000396886 2250 ntTSL 2 BASIC11.06□□□□□ -0.64
IFNA1P01562 GNAL-203ENST00000423027 2255 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC11.06□□□□□ -0.64
IFNA1P01562 PPP1R12B-214ENST00000491336 2046 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 PKP1-201ENST00000263946 5447 ntTSL 5 BASIC11.06□□□□□ -0.64
IFNA1P01562 PTPRK-203ENST00000368207 4758 ntTSL 5 BASIC11.06□□□□□ -0.64
IFNA1P01562 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 DLG5-201ENST00000372391 7415 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 ARPC5-202ENST00000359856 7209 ntAPPRIS P3 TSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 MGLL-205ENST00000453507 4552 ntTSL 2 BASIC11.06□□□□□ -0.64
IFNA1P01562 GPR37L1-201ENST00000367282 6588 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 NEK1-201ENST00000439128 5653 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 NLRP7-201ENST00000328092 3299 ntAPPRIS P3 TSL 5 BASIC11.06□□□□□ -0.64
IFNA1P01562 PNKD-201ENST00000248451 758 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 ITLN1-201ENST00000326245 1183 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 C11orf88-202ENST00000375618 712 ntAPPRIS ALT2 TSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 CUL5-201ENST00000393094 6351 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 RPL30-202ENST00000396070 440 ntTSL 2 BASIC11.06□□□□□ -0.64
IFNA1P01562 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC11.06□□□□□ -0.64
IFNA1P01562 AL627223.1-201ENST00000416693 442 ntBASIC11.06□□□□□ -0.64
IFNA1P01562 MED15P5-201ENST00000423150 992 ntBASIC11.06□□□□□ -0.64
IFNA1P01562 MKNK2P1-201ENST00000437526 628 ntBASIC11.06□□□□□ -0.64
IFNA1P01562 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC11.06□□□□□ -0.64
IFNA1P01562 AL356441.1-201ENST00000452618 492 ntTSL 3 BASIC11.06□□□□□ -0.64
IFNA1P01562 INS-205ENST00000512523 297 ntTSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 AP001582.1-201ENST00000525856 295 ntBASIC11.06□□□□□ -0.64
IFNA1P01562 AC068587.3-201ENST00000526613 355 ntBASIC11.06□□□□□ -0.64
IFNA1P01562 DEUP1-206ENST00000530273 410 ntTSL 3 BASIC11.06□□□□□ -0.64
IFNA1P01562 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC11.06□□□□□ -0.64
IFNA1P01562 TRAPPC6A-202ENST00000585934 758 ntAPPRIS P1 TSL 1 (best) BASIC11.06□□□□□ -0.64
IFNA1P01562 YIF1B-214ENST00000591784 940 ntTSL 5 BASIC11.06□□□□□ -0.64
IFNA1P01562 MRPL34-205ENST00000600434 793 ntAPPRIS P2 TSL 3 BASIC11.06□□□□□ -0.64
IFNA1P01562 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC11.06□□□□□ -0.64
IFNA1P01562 TEX28P1-201ENST00000613479 1221 ntBASIC11.06□□□□□ -0.64
Retrieved 100 of 98,524 protein–RNA pairs in 74.1 ms