Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 TFAP2A-213ENST00000482890 2071 ntAPPRIS P3 TSL 5 BASIC5.97□□□□□ -1.45
USH2AO75445 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC5.97□□□□□ -1.45
USH2AO75445 ECM1-203ENST00000369049 1925 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
USH2AO75445 CACNB3-203ENST00000540990 1814 ntTSL 2 BASIC5.97□□□□□ -1.45
USH2AO75445 PTPDC1-202ENST00000375360 4517 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
USH2AO75445 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USH2AO75445 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC5.97□□□□□ -1.45
USH2AO75445 PLEKHN1-203ENST00000379410 2404 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
USH2AO75445 CYB561-203ENST00000392976 3151 ntAPPRIS P1 TSL 3 BASIC5.97□□□□□ -1.45
USH2AO75445 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC5.97□□□□□ -1.45
USH2AO75445 LINC00472-203ENST00000426635 2958 ntTSL 2 BASIC5.97□□□□□ -1.45
USH2AO75445 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
USH2AO75445 CICP16-201ENST00000502609 2813 ntBASIC5.97□□□□□ -1.45
USH2AO75445 CEP295NL-201ENST00000322630 2090 ntTSL 2 BASIC5.97□□□□□ -1.45
USH2AO75445 APOC2-201ENST00000252490 727 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
USH2AO75445 VEGFA-224ENST00000523873 784 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USH2AO75445 IFI27L1-209ENST00000555523 680 ntAPPRIS P1 TSL 2 BASIC5.97□□□□□ -1.45
USH2AO75445 AC109446.3-201ENST00000567344 641 ntTSL 3 BASIC5.97□□□□□ -1.45
USH2AO75445 AC009034.1-201ENST00000568125 669 ntTSL 2 BASIC5.97□□□□□ -1.45
USH2AO75445 MIA-RAB4B-201ENST00000600729 1229 ntAPPRIS P1 TSL 5 BASIC5.97□□□□□ -1.45
USH2AO75445 ADGRG5-207ENST00000615867 762 ntTSL 4 BASIC5.97□□□□□ -1.45
USH2AO75445 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USH2AO75445 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC5.97□□□□□ -1.45
USH2AO75445 CCDC47-201ENST00000225726 3466 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USH2AO75445 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC5.97□□□□□ -1.45
USH2AO75445 PIGB-202ENST00000539642 1668 ntAPPRIS ALT2 TSL 5 BASIC5.97□□□□□ -1.45
USH2AO75445 TCP10-202ENST00000397829 2141 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
USH2AO75445 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USH2AO75445 CSMD2-202ENST00000338325 1544 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USH2AO75445 USP43-202ENST00000570475 3500 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
USH2AO75445 AC012358.2-201ENST00000430010 1434 ntBASIC5.97□□□□□ -1.45
USH2AO75445 CELF4-212ENST00000588597 1444 ntTSL 2 BASIC5.97□□□□□ -1.45
USH2AO75445 ADAM15-228ENST00000531455 2678 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
USH2AO75445 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USH2AO75445 ZFHX4-AS1-201ENST00000518143 1711 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USH2AO75445 CXorf40B-201ENST00000355203 1067 ntAPPRIS P2 TSL 1 (best) BASIC5.97□□□□□ -1.45
USH2AO75445 PLPP4-201ENST00000369073 1135 ntTSL 5 BASIC5.97□□□□□ -1.45
USH2AO75445 SNORA9B-201ENST00000384170 133 ntBASIC5.97□□□□□ -1.45
USH2AO75445 AL391647.1-201ENST00000395664 511 ntBASIC5.97□□□□□ -1.45
USH2AO75445 PPP1R7-206ENST00000406106 965 ntTSL 1 (best) BASIC5.97□□□□□ -1.45
USH2AO75445 SNORD23-201ENST00000408876 110 ntBASIC5.97□□□□□ -1.45
USH2AO75445 FTLP16-201ENST00000446400 513 ntBASIC5.97□□□□□ -1.45
USH2AO75445 AL391152.1-202ENST00000551408 624 ntTSL 3 BASIC5.97□□□□□ -1.45
USH2AO75445 AC244102.2-201ENST00000597568 955 ntBASIC5.97□□□□□ -1.45
USH2AO75445 AC121247.1-201ENST00000622888 1232 ntBASIC5.97□□□□□ -1.45
USH2AO75445 BMP1-202ENST00000306385 4229 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USH2AO75445 PRMT1-217ENST00000532489 1686 ntTSL 5 BASIC5.97□□□□□ -1.45
USH2AO75445 CPA4-210ENST00000493259 1512 ntTSL 2 BASIC5.97□□□□□ -1.45
USH2AO75445 MCM4-201ENST00000262105 4183 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USH2AO75445 CDK2-201ENST00000266970 2296 ntAPPRIS P1 TSL 1 (best) BASIC5.97□□□□□ -1.45
USH2AO75445 PODN-201ENST00000312553 3010 ntAPPRIS P3 TSL 1 (best) BASIC5.97□□□□□ -1.45
USH2AO75445 MCF2L-232ENST00000535094 3752 ntAPPRIS ALT2 TSL 2 BASIC5.97□□□□□ -1.45
USH2AO75445 TMPRSS13-201ENST00000430170 2175 ntAPPRIS ALT2 TSL 1 (best) BASIC5.97□□□□□ -1.45
USH2AO75445 XYLT2-201ENST00000017003 3507 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
USH2AO75445 AL365203.3-201ENST00000609742 2057 ntBASIC5.96□□□□□ -1.45
USH2AO75445 VARS2-212ENST00000542001 4064 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
USH2AO75445 PIGT-246ENST00000639499 2021 ntTSL 5 BASIC5.96□□□□□ -1.45
USH2AO75445 DBNDD1-203ENST00000392973 2689 ntTSL 2 BASIC5.96□□□□□ -1.45
USH2AO75445 ZNF576-203ENST00000525771 2327 ntAPPRIS P1 TSL 2 BASIC5.96□□□□□ -1.45
USH2AO75445 PCBP4-201ENST00000322099 1964 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
USH2AO75445 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC5.96□□□□□ -1.45
USH2AO75445 YAE1D1-201ENST00000223273 899 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
USH2AO75445 PRPS1-201ENST00000372418 942 ntTSL 3 BASIC5.96□□□□□ -1.45
USH2AO75445 CNN2P9-201ENST00000417134 909 ntBASIC5.96□□□□□ -1.45
USH2AO75445 AL662860.1-201ENST00000436804 877 ntTSL 5 BASIC5.96□□□□□ -1.45
USH2AO75445 E2F6P4-201ENST00000468625 514 ntBASIC5.96□□□□□ -1.45
USH2AO75445 OR10V2P-201ENST00000525296 764 ntBASIC5.96□□□□□ -1.45
USH2AO75445 AC091132.3-201ENST00000579701 470 ntBASIC5.96□□□□□ -1.45
USH2AO75445 AC138645.1-201ENST00000582765 470 ntBASIC5.96□□□□□ -1.45
USH2AO75445 SNHG15-209ENST00000584686 541 ntTSL 3 BASIC5.96□□□□□ -1.45
USH2AO75445 STAG3L1-204ENST00000619870 1192 ntTSL 2 BASIC5.96□□□□□ -1.45
USH2AO75445 AL139260.2-201ENST00000622355 2171 ntTSL 2 BASIC5.96□□□□□ -1.45
USH2AO75445 GPAT2-204ENST00000453542 2466 ntTSL 2 BASIC5.96□□□□□ -1.45
USH2AO75445 FBXO45-202ENST00000440469 3689 ntTSL 2 BASIC5.96□□□□□ -1.45
USH2AO75445 ZNF568-203ENST00000427117 1827 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
USH2AO75445 NAALADL1-203ENST00000356632 2118 ntTSL 5 BASIC5.96□□□□□ -1.45
USH2AO75445 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC5.96□□□□□ -1.45
USH2AO75445 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC5.96□□□□□ -1.45
USH2AO75445 HYAL1-209ENST00000618175 2225 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.45
USH2AO75445 ATP6V0A1-204ENST00000537728 2774 ntTSL 2 BASIC5.96□□□□□ -1.45
USH2AO75445 NFS1-203ENST00000374092 3012 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.45
USH2AO75445 HSPA7-201ENST00000445535 1927 ntBASIC5.96□□□□□ -1.45
USH2AO75445 LINC01225-202ENST00000562339 2113 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 CLUHP3-207ENST00000563678 1303 ntBASIC5.96□□□□□ -1.46
USH2AO75445 KRT8P24-201ENST00000560290 1559 ntBASIC5.96□□□□□ -1.46
USH2AO75445 COASY-202ENST00000421097 2071 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 SFXN3-202ENST00000393459 3098 ntAPPRIS P1 TSL 5 BASIC5.96□□□□□ -1.46
USH2AO75445 WFDC2-201ENST00000217425 356 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 PRDX2-201ENST00000301522 987 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 AL356414.1-201ENST00000379526 686 ntTSL 3 BASIC5.96□□□□□ -1.46
USH2AO75445 EXOC7-206ENST00000406660 718 ntTSL 2 BASIC5.96□□□□□ -1.46
USH2AO75445 SERF2-210ENST00000409960 1032 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 TRGV2-201ENST00000426402 544 ntAPPRIS P1 BASIC5.96□□□□□ -1.46
USH2AO75445 LANCL1-203ENST00000431941 1270 ntAPPRIS P1 TSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 C2orf27AP2-201ENST00000438438 555 ntBASIC5.96□□□□□ -1.46
USH2AO75445 AL662791.4-201ENST00000445544 317 ntTSL 3 BASIC5.96□□□□□ -1.46
USH2AO75445 OPRM1-211ENST00000518759 1060 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
USH2AO75445 AC137932.2-201ENST00000562995 1205 ntTSL 2 BASIC5.96□□□□□ -1.46
USH2AO75445 MPI-212ENST00000565576 1148 ntTSL 2 BASIC5.96□□□□□ -1.46
USH2AO75445 BX547991.1-201ENST00000582543 1206 ntTSL 1 (best) BASIC5.96□□□□□ -1.46
Retrieved 100 of 98,524 protein–RNA pairs in 77.8 ms