Protein–RNA interactions for Protein: Q9Y2P8

RCL1, RNA 3'-terminal phosphate cyclase-like protein, humanhuman

Known RBP Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RCL1Q9Y2P8 BAHCC1-201ENST00000307745 10342 ntAPPRIS ALT2 TSL 5 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 ABCC9-203ENST00000326684 1693 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 AAAS-217ENST00000550286 1652 ntTSL 5 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 EGR2-202ENST00000411732 2824 ntTSL 2 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 MARK2P16-201ENST00000605714 1723 ntBASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 ZNF197-204ENST00000383745 2935 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 HEXA-201ENST00000268097 5252 ntAPPRIS P2 TSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 HTR4-203ENST00000377888 2962 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 RBM19-201ENST00000261741 4194 ntAPPRIS P1 TSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 PSG4-203ENST00000433626 1887 ntTSL 2 BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 PPP4R3B-206ENST00000616407 4385 ntTSL 1 (best) BASIC11.49□□□□□ -0.57
RCL1Q9Y2P8 GMEB2-201ENST00000266068 4559 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 SIX1-203ENST00000554986 1959 ntTSL 3 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 SCN8A-209ENST00000627620 5943 ntAPPRIS ALT1 TSL 5 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 DYNC1I2-204ENST00000409317 2196 ntTSL 5 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 MYO1D-202ENST00000394649 5451 ntTSL 5 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 C1orf109-201ENST00000358011 2355 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 CCER1-201ENST00000358859 2962 ntAPPRIS P1 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 DNAJB12-202ENST00000394903 3198 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 PPFIBP1-215ENST00000542629 3208 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 BRWD1-204ENST00000380800 7605 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 MPV17-201ENST00000233545 998 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 ALKBH6-201ENST00000252984 955 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 NPM2-201ENST00000289820 1100 ntAPPRIS P2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 H2AFZ-201ENST00000296417 979 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 MRPL16-201ENST00000300151 1182 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 MYMK-201ENST00000339996 818 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 NPM2-202ENST00000381530 925 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 UBE2I-206ENST00000403747 1217 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 ZC3H12D-202ENST00000409948 753 ntTSL 3 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 DGCR6-202ENST00000413981 1039 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 AL391361.3-201ENST00000420601 379 ntTSL 2 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 AL354893.2-201ENST00000423075 529 ntTSL 5 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 C9orf116-205ENST00000429260 678 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 SIRPB2-203ENST00000444444 884 ntTSL 2 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 SLC25A36-204ENST00000453248 1040 ntTSL 2 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 AC002116.1-201ENST00000473572 1130 ntTSL 2 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 AC093004.1-201ENST00000508850 424 ntBASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 IL32-218ENST00000530890 774 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 IL32-222ENST00000533097 814 ntAPPRIS P4 TSL 2 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 ENPP7P5-201ENST00000541031 1031 ntBASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 IL32-234ENST00000552936 713 ntAPPRIS ALT2 TSL 3 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 LINC00928-204ENST00000561201 1123 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 AP000229.1-202ENST00000609365 559 ntTSL 4 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 AC134684.3-201ENST00000641758 218 ntBASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 IL32-201ENST00000008180 1056 ntAPPRIS ALT2 TSL 2 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 HTR4-209ENST00000521530 1323 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 SLC7A15P-201ENST00000424028 1363 ntBASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 ELOVL1-201ENST00000372458 1477 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 REXO1L6P-201ENST00000603433 1515 ntBASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 ANTXR2-203ENST00000403729 8273 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 GPNMB-203ENST00000409458 1673 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 ITGAL-201ENST00000356798 5213 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 SS18-201ENST00000269137 1836 ntAPPRIS ALT1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 HSPA8P9-201ENST00000485881 1943 ntBASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 AL031687.1-201ENST00000450586 2137 ntTSL 2 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 HNRNPH1-216ENST00000510411 2105 ntTSL 5 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 DGKZ-216ENST00000528615 2692 ntTSL 5 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 GRIPAP1-215ENST00000622599 2881 ntTSL 5 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 ATG16L1-201ENST00000347464 2915 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 SH2D3C-202ENST00000373276 3051 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 POMT1-203ENST00000372228 3123 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 NLGN3-206ENST00000612180 3319 ntTSL 5 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 ZNF287-201ENST00000395824 3373 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 TMEM134-201ENST00000308022 3534 ntAPPRIS P1 TSL 2 BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 AC092028.1-202ENST00000641483 3547 ntBASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 AC092028.1-201ENST00000641781 3540 ntBASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 SLC38A7-215ENST00000570101 4549 ntAPPRIS P1 TSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 ENTPD4-202ENST00000358689 5861 ntTSL 1 (best) BASIC11.48□□□□□ -0.57
RCL1Q9Y2P8 NKAP-201ENST00000371410 5963 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 ACSF3-201ENST00000317447 3664 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 MCM2-201ENST00000265056 3622 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 PNMA3-203ENST00000619635 3627 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 CSTF2-203ENST00000415585 2074 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 POLDIP3-209ENST00000617178 2006 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 LDB3-205ENST00000429277 5436 ntTSL 2 BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 ACVR1C-204ENST00000409680 1786 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 CCT8L1P-201ENST00000465400 1674 ntBASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 GPC4-201ENST00000370828 4960 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 C10orf105-202ENST00000441508 4836 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC11.47□□□□□ -0.57
RCL1Q9Y2P8 MDH2-203ENST00000432020 1548 ntTSL 2 BASIC11.47□□□□□ -0.57
Retrieved 100 of 98,524 protein–RNA pairs in 40.5 ms