Protein–RNA interactions for Protein: Q9UND3

NPIPA1, Nuclear pore complex-interacting protein family member A1, humanhuman

Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NPIPA1Q9UND3 FAM167A-AS1-202ENST00000533578 1222 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 AC104961.2-201ENST00000578129 663 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 NUDT4P2-201ENST00000578341 546 ntBASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 BCL2L12-204ENST00000594157 620 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 AC084781.1-201ENST00000613737 656 ntBASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 TAC3-211ENST00000615887 1120 ntAPPRIS P1 TSL 2 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 AC090386.2-201ENST00000623010 1039 ntBASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 AC073911.3-201ENST00000624401 631 ntBASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 AP001184.1-201ENST00000637936 376 ntBASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 ELOA2-202ENST00000620522 1641 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 MPZL1-203ENST00000392121 3421 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 C1R-202ENST00000536053 2347 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 RPS6KC1-206ENST00000543354 4082 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 RNF167-201ENST00000262482 1915 ntAPPRIS P3 TSL 2 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 GRM1-204ENST00000492807 6836 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 ZCCHC8-207ENST00000543897 5663 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 UHMK1-203ENST00000538489 8446 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 SGK2-204ENST00000373100 2225 ntAPPRIS P1 TSL 5 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 ERG-207ENST00000398919 1868 ntAPPRIS ALT1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 ZBTB7B-202ENST00000368426 3594 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 NEFH-201ENST00000310624 3783 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 KLHL25-201ENST00000337975 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 CD59-201ENST00000351554 1775 ntAPPRIS P2 TSL 2 BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
NPIPA1Q9UND3 LGALS12-202ENST00000340246 1425 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 AC109583.3-201ENST00000641183 3128 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 TEKT4P2-202ENST00000559466 1312 ntBASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 MUC1-223ENST00000611571 4170 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 SLC25A20-202ENST00000430379 1576 ntTSL 3 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 SYNGAP1-208ENST00000629380 9862 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 TOMM20L-201ENST00000360945 620 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 IGHV3-49-201ENST00000390625 439 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 HLA-DMA-203ENST00000395305 777 ntBASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 HIST2H2BA-201ENST00000412169 381 ntBASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 OR8T1P-201ENST00000421347 918 ntBASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 IMPA1-203ENST00000449740 1180 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 AC132803.1-201ENST00000504204 493 ntTSL 2 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 RBM4B-202ENST00000524637 867 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 EIF3K-202ENST00000538434 966 ntTSL 2 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 SMIM6-201ENST00000556126 866 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 AL845331.2-201ENST00000561882 1044 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 HERC2P11-201ENST00000562845 725 ntBASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 AC020763.1-201ENST00000567186 551 ntTSL 4 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 AC100756.2-201ENST00000569537 736 ntBASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 AC129507.4-201ENST00000570501 411 ntTSL 2 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 AP005264.1-201ENST00000586226 733 ntTSL 3 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 GOLGA2-212ENST00000609374 2973 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 AL161773.1-201ENST00000624845 863 ntBASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 AC005618.3-201ENST00000624928 458 ntBASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 NPHP3-ACAD11-201ENST00000471702 7784 ntTSL 2 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 BRD7P5-201ENST00000299197 1822 ntBASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 DDC-213ENST00000617822 1809 ntTSL 3 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 TAB1-201ENST00000216160 3237 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 CSF3-201ENST00000225474 1509 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 DGKE-201ENST00000284061 8660 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
NPIPA1Q9UND3 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPA1Q9UND3 NFATC2-202ENST00000396009 7437 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPA1Q9UND3 PRIMPOL-211ENST00000515774 2007 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPA1Q9UND3 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.34
NPIPA1Q9UND3 AC025271.4-201ENST00000621477 1726 ntBASIC12.96□□□□□ -0.34
NPIPA1Q9UND3 ATP6V0A1-203ENST00000393829 3028 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPA1Q9UND3 TRIM45-201ENST00000256649 3515 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPA1Q9UND3 CYP51A1P3-201ENST00000400072 1428 ntBASIC12.96□□□□□ -0.34
NPIPA1Q9UND3 KCTD1-207ENST00000580059 1425 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.34
NPIPA1Q9UND3 AL513327.1-206ENST00000587696 1432 ntTSL 5 BASIC12.96□□□□□ -0.34
NPIPA1Q9UND3 IL20RA-201ENST00000316649 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPA1Q9UND3 ARFGAP1-202ENST00000370275 3467 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPA1Q9UND3 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPA1Q9UND3 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
NPIPA1Q9UND3 SLC25A21-AS1-201ENST00000556667 1924 ntBASIC12.96□□□□□ -0.34
NPIPA1Q9UND3 BAIAP3-201ENST00000324385 4678 ntAPPRIS P3 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 LETMD1-201ENST00000262055 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
NPIPA1Q9UND3 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC12.95□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 77 ms