Protein–RNA interactions for Protein: Q9UBP0

SPAST, Spastin, humanhuman

Predictions only

Length 616 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPASTQ9UBP0 ARMC8-213ENST00000470821 1656 ntTSL 5 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 SAR1A-204ENST00000373241 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 AC013460.1-202ENST00000435062 2253 ntTSL 2 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC14.01□□□□□ -0.17
SPASTQ9UBP0 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 LRRFIP1-203ENST00000308482 2775 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 EPHA2-201ENST00000358432 3964 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 CHCHD7-202ENST00000355315 1535 ntTSL 2 BASIC14□□□□□ -0.17
SPASTQ9UBP0 PROSER3-202ENST00000396908 2149 ntAPPRIS P5 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 POU2F2-202ENST00000389341 6901 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14□□□□□ -0.17
SPASTQ9UBP0 AC011498.7-201ENST00000624986 2027 ntBASIC14□□□□□ -0.17
SPASTQ9UBP0 MAD2L1-201ENST00000296509 5468 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 YIPF3-213ENST00000506469 1444 ntTSL 5 BASIC14□□□□□ -0.17
SPASTQ9UBP0 SNX14-203ENST00000369627 3111 ntTSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 CSAD-203ENST00000379846 1962 ntTSL 5 BASIC14□□□□□ -0.17
SPASTQ9UBP0 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SPASTQ9UBP0 WARS-203ENST00000358655 2466 ntTSL 2 BASIC14□□□□□ -0.17
SPASTQ9UBP0 TTC7A-203ENST00000409245 3033 ntTSL 2 BASIC14□□□□□ -0.17
SPASTQ9UBP0 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 CEP131-202ENST00000374782 3505 ntAPPRIS P3 TSL 5 BASIC14□□□□□ -0.17
SPASTQ9UBP0 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 LMAN2L-201ENST00000264963 2397 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 MYD88-203ENST00000417037 2871 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 MKRN2-201ENST00000170447 2848 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 ZNF251-201ENST00000292562 2807 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SPASTQ9UBP0 CXCL12-202ENST00000374426 470 ntTSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 BAX-205ENST00000391871 687 ntTSL 5 BASIC14□□□□□ -0.17
SPASTQ9UBP0 HIST2H2BA-201ENST00000412169 381 ntBASIC14□□□□□ -0.17
SPASTQ9UBP0 AC006987.1-201ENST00000413610 527 ntBASIC14□□□□□ -0.17
SPASTQ9UBP0 MPC1L-201ENST00000423387 571 ntAPPRIS P1 BASIC14□□□□□ -0.17
SPASTQ9UBP0 AL157788.1-201ENST00000437838 229 ntTSL 3 BASIC14□□□□□ -0.17
SPASTQ9UBP0 AC013448.2-201ENST00000440341 787 ntTSL 5 BASIC14□□□□□ -0.17
SPASTQ9UBP0 AC098934.1-203ENST00000442868 1262 ntBASIC14□□□□□ -0.17
SPASTQ9UBP0 ERP29P1-201ENST00000442902 706 ntBASIC14□□□□□ -0.17
SPASTQ9UBP0 AC018463.1-201ENST00000456674 917 ntBASIC14□□□□□ -0.17
SPASTQ9UBP0 RPP40-203ENST00000464646 1042 ntTSL 5 BASIC14□□□□□ -0.17
SPASTQ9UBP0 RN7SL818P-201ENST00000485099 259 ntBASIC14□□□□□ -0.17
SPASTQ9UBP0 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC14□□□□□ -0.17
SPASTQ9UBP0 SDHAF2-206ENST00000542074 835 ntTSL 2 BASIC14□□□□□ -0.17
SPASTQ9UBP0 NACA-221ENST00000552540 1074 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 TCL1A-205ENST00000555202 717 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 HERC2P11-201ENST00000562845 725 ntBASIC14□□□□□ -0.17
SPASTQ9UBP0 AC020659.1-202ENST00000564432 531 ntTSL 5 BASIC14□□□□□ -0.17
SPASTQ9UBP0 AC100756.2-201ENST00000569537 736 ntBASIC14□□□□□ -0.17
SPASTQ9UBP0 RN7SL665P-201ENST00000578793 300 ntBASIC14□□□□□ -0.17
SPASTQ9UBP0 MIR3180-2-201ENST00000581748 88 ntBASIC14□□□□□ -0.17
SPASTQ9UBP0 RN7SL470P-201ENST00000583069 259 ntBASIC14□□□□□ -0.17
SPASTQ9UBP0 TPGS2-209ENST00000589049 1102 ntTSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 RN7SL725P-201ENST00000606439 259 ntBASIC14□□□□□ -0.17
SPASTQ9UBP0 AC107464.3-201ENST00000609172 737 ntBASIC14□□□□□ -0.17
SPASTQ9UBP0 AC104506.1-201ENST00000609247 429 ntBASIC14□□□□□ -0.17
SPASTQ9UBP0 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 AC025262.2-201ENST00000623975 1056 ntBASIC14□□□□□ -0.17
SPASTQ9UBP0 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC14□□□□□ -0.17
SPASTQ9UBP0 RUBCNL-204ENST00000378797 3206 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 MSH5-201ENST00000375703 2708 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 AGPAT3-218ENST00000546158 2199 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
SPASTQ9UBP0 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC14□□□□□ -0.17
SPASTQ9UBP0 AC036214.1-201ENST00000502766 2126 ntTSL 2 BASIC14□□□□□ -0.17
SPASTQ9UBP0 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC14□□□□□ -0.17
SPASTQ9UBP0 CACNA1I-202ENST00000402142 10004 ntAPPRIS P4 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC14□□□□□ -0.17
SPASTQ9UBP0 SERF2-201ENST00000249786 1537 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 TRAF3-208ENST00000560371 7640 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 BOLL-203ENST00000392296 2838 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
SPASTQ9UBP0 OSBPL8-203ENST00000393250 3157 ntAPPRIS ALT1 TSL 5 BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 ADPRHL1-204ENST00000612156 9759 ntTSL 5 BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 MST1P2-201ENST00000457982 2291 ntBASIC13.99□□□□□ -0.17
SPASTQ9UBP0 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 FASN-201ENST00000306749 8565 ntAPPRIS P2 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 MBTD1-204ENST00000586178 5382 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 GDF9-201ENST00000296875 1796 ntTSL 5 BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 WNT7A-201ENST00000285018 4041 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 TEX264-201ENST00000341333 1340 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 TMEM177-202ENST00000401466 1346 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 CCT8L1P-201ENST00000465400 1674 ntBASIC13.99□□□□□ -0.17
SPASTQ9UBP0 HCFC2-201ENST00000229330 5734 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 AC107918.4-201ENST00000641966 3141 ntBASIC13.99□□□□□ -0.17
SPASTQ9UBP0 IL17B-201ENST00000261796 696 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 LIMS1-201ENST00000332345 1235 ntAPPRIS P3 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 SAT1-201ENST00000379251 801 ntTSL 2 BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 SAT1-202ENST00000379253 909 ntTSL 2 BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 SAT1-203ENST00000379254 868 ntTSL 3 BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 PDCD5-202ENST00000379316 154 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 IGHV4-39-201ENST00000390619 425 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
SPASTQ9UBP0 AL592301.1-201ENST00000439501 864 ntTSL 3 BASIC13.99□□□□□ -0.17
Retrieved 100 of 98,524 protein–RNA pairs in 58.7 ms