Protein–RNA interactions for Protein: Q9UBC3

DNMT3B, DNA (cytosine-5)-methyltransferase 3B, humanhuman

Known RBP Predictions only

Length 853 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3BQ9UBC3 ANKRD26-201ENST00000376087 6591 ntAPPRIS P2 TSL 5 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 PKD1P6-NPIPP1-202ENST00000605794 2902 ntTSL 2 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 SEZ6-201ENST00000317338 4471 ntAPPRIS P4 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 DGCR9-201ENST00000609630 2415 ntBASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 PCDHA6-203ENST00000529310 5374 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 FKBP9-214ENST00000538336 3621 ntTSL 2 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 RASGEF1C-202ENST00000393371 2395 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 PPM1F-203ENST00000407142 5587 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 CNOT10-201ENST00000328834 2815 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 ABTB2-201ENST00000435224 4902 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 TNNI2-201ENST00000252898 678 ntAPPRIS P3 TSL 3 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 LZTS1-201ENST00000265801 5459 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 SLIT3-201ENST00000332966 4895 ntAPPRIS ALT2 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 ATP5S-203ENST00000358473 801 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 TNNI2-202ENST00000381905 706 ntAPPRIS ALT1 TSL 3 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 TNNI2-203ENST00000381906 745 ntAPPRIS P3 TSL 3 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 TNNI2-204ENST00000381911 743 ntAPPRIS P3 TSL 2 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 AC103702.2-203ENST00000425510 379 ntTSL 5 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 AC093609.1-201ENST00000434020 952 ntTSL 2 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 AC008620.2-201ENST00000510294 1569 ntBASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 AC104964.1-201ENST00000520494 489 ntTSL 2 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 LINC00301-203ENST00000527161 749 ntTSL 2 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 AC078814.4-201ENST00000546650 327 ntBASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 AC009065.6-201ENST00000568795 456 ntTSL 2 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 HIST2H4A-201ENST00000578186 583 ntAPPRIS P1 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 NAV1-210ENST00000593583 726 ntBASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 AL451165.2-201ENST00000606971 718 ntTSL 2 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 URAHP-205ENST00000610227 398 ntBASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 AC018695.6-201ENST00000614011 534 ntBASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 LINC01669-201ENST00000623161 413 ntTSL 3 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 ZBED1-202ENST00000381222 4507 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 CACTIN-203ENST00000429344 3612 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 SLC26A8-201ENST00000355574 3463 ntAPPRIS P1 TSL 2 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 FAM47E-STBD1-204ENST00000515604 3029 ntAPPRIS P2 TSL 2 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 NUMB-216ENST00000555394 3037 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 DEPTOR-201ENST00000286234 2569 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 IQCE-216ENST00000611775 2289 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 SIGLEC9-202ENST00000440804 1960 ntAPPRIS ALT2 TSL 2 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 PCSK5-205ENST00000545128 9538 ntAPPRIS ALT2 TSL 5 BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 RPF1-201ENST00000370654 1385 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 SIKE1-203ENST00000369528 5506 ntAPPRIS ALT1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 OTUD7A-201ENST00000307050 10770 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 CCT7-201ENST00000258091 1916 ntAPPRIS P1 TSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 DCAF13-209ENST00000616836 2639 ntTSL 1 (best) BASIC14.45□□□□□ -0.1
DNMT3BQ9UBC3 ARFIP1-203ENST00000405727 1601 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 CNBP-203ENST00000446936 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 CNBP-204ENST00000451728 1641 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 UHRF1BP1-202ENST00000452449 4706 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 PML-208ENST00000436891 3010 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 ZFYVE28-211ENST00000515312 3247 ntAPPRIS ALT2 TSL 2 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 TELO2-201ENST00000262319 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 UBR5-207ENST00000520539 10297 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 PCBD1-201ENST00000299299 1006 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 HIST1H2BF-201ENST00000356530 1196 ntAPPRIS P1 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 RPL10-203ENST00000406022 748 ntTSL 3 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 CITED1-209ENST00000453707 998 ntAPPRIS ALT2 TSL 3 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 TMEM222-204ENST00000466759 368 ntTSL 3 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 CD44-224ENST00000526669 870 ntTSL 5 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 KNOP1P1-201ENST00000542108 989 ntBASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 AC018761.2-201ENST00000585496 296 ntTSL 3 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 SEPT14P19-201ENST00000587432 336 ntTSL 2 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 AC016586.1-201ENST00000600056 684 ntTSL 3 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 AC006547.3-201ENST00000600090 583 ntTSL 3 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 AL078590.3-205ENST00000606039 465 ntTSL 5 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 CSTP2-201ENST00000610599 398 ntBASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 AL139424.3-202ENST00000641619 917 ntBASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 DLG2-205ENST00000398301 2070 ntTSL 2 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 ANKHD1-EIF4EBP3-203ENST00000532219 8246 ntAPPRIS P1 TSL 2 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 IFNAR2-202ENST00000342136 2899 ntAPPRIS P4 TSL 1 (best) BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 ZSWIM8-201ENST00000398706 6062 ntTSL 2 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 TNFRSF11A-206ENST00000617039 3756 ntAPPRIS ALT2 TSL 1 (best) BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 CARHSP1-220ENST00000619881 2849 ntAPPRIS P1 TSL 3 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 SLC4A2-214ENST00000485713 4925 ntAPPRIS P3 TSL 1 (best) BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 GLUL-202ENST00000331872 4364 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 RHOBTB2-206ENST00000522948 4959 ntAPPRIS ALT2 TSL 5 BASIC14.44□□□□□ -0.1
DNMT3BQ9UBC3 RTFDC1-201ENST00000023939 1745 ntTSL 2 BASIC14.44□□□□□ -0.1
Retrieved 100 of 98,524 protein–RNA pairs in 75 ms