Protein–RNA interactions for Protein: Q9NUP7

TRMT13, tRNA:m(4)X modification enzyme TRM13 homolog, humanhuman

Known RBP Predictions only

Length 481 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRMT13Q9NUP7 TMCO3-207ENST00000474393 2843 ntTSL 2 BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 AC093462.1-201ENST00000621167 1683 ntBASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 RNF145-212ENST00000611185 3624 ntAPPRIS P1 TSL 5 BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 EPB41L3-201ENST00000341928 4706 ntAPPRIS P3 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 SAFB-202ENST00000454510 2650 ntAPPRIS ALT2 TSL 2 BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 KCNT1-211ENST00000491806 3678 ntAPPRIS ALT2 TSL 5 BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 RUNX1T1-246ENST00000523629 7537 ntAPPRIS P3 TSL 5 BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 RPL18AP16-201ENST00000424057 531 ntBASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 CMPK1-204ENST00000450808 950 ntTSL 2 BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 ANKRD2-204ENST00000455090 1072 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 RBM4-211ENST00000530235 1011 ntTSL 3 BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 SNRPF-204ENST00000552085 815 ntTSL 3 BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 AC010504.1-201ENST00000591311 585 ntTSL 3 BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 AC245100.4-201ENST00000634549 1082 ntTSL 5 BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 LINC01922-202ENST00000567168 1704 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 BNIP2-201ENST00000267859 6325 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 Z82195.2-202ENST00000458525 1646 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 COBL-203ENST00000395542 5339 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 KCNIP2-203ENST00000348850 2089 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 DIS3-202ENST00000377780 5232 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 VWA2-202ENST00000392982 2794 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 KIAA1841-201ENST00000295031 3116 ntTSL 1 (best) BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 BCAR1-202ENST00000393420 2667 ntTSL 5 BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 ALDOA-202ENST00000395240 1447 ntAPPRIS ALT1 TSL 5 BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 AC089987.1-201ENST00000551654 2209 ntBASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 MPP6-201ENST00000222644 8452 ntAPPRIS P1 TSL 1 (best) BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 ELFN2-201ENST00000402918 8361 ntAPPRIS P1 TSL 4 BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 PIGV-202ENST00000374145 2713 ntAPPRIS P1 TSL 2 BASIC15.16■□□□□ 0.02
TRMT13Q9NUP7 FBXL19-202ENST00000380310 3796 ntAPPRIS P2 TSL 2 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 CUL3-202ENST00000344951 6592 ntTSL 2 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 FAM226B-201ENST00000602508 1490 ntBASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 AC020910.6-201ENST00000623084 1459 ntBASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 SLC39A11-202ENST00000542342 2752 ntAPPRIS ALT1 TSL 2 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 MAGEC3-205ENST00000544766 1707 ntAPPRIS ALT2 TSL 5 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 UBXN2B-201ENST00000399598 5068 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 AC064850.1-201ENST00000413279 1398 ntBASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 GOLGA8EP-201ENST00000530246 1959 ntBASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 PTBP1-201ENST00000349038 3155 ntAPPRIS P3 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 COMP-201ENST00000222271 2461 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 MPV17-209ENST00000405983 859 ntTSL 5 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 AL158207.2-201ENST00000414926 266 ntTSL 5 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 AL591242.1-201ENST00000422284 343 ntTSL 2 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 SFRP4-201ENST00000436072 2966 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 STAG3L3-203ENST00000436857 1033 ntTSL 2 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 AC147876.1-201ENST00000504408 322 ntBASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 ACY3-202ENST00000529256 933 ntTSL 3 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 WNT5B-206ENST00000542408 508 ntTSL 3 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 AC087741.1-205ENST00000572730 750 ntTSL 3 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 ZNF724-202ENST00000597037 780 ntTSL 2 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 MEP1AP1-201ENST00000636082 1097 ntBASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 SYMPK-213ENST00000599460 5449 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 JPT1-202ENST00000356033 1519 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 SVOPL-202ENST00000419765 1523 ntAPPRIS P1 TSL 5 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 WAC-AS1-202ENST00000528337 2608 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 NF2-205ENST00000361452 5884 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 GPM6B-202ENST00000355135 1673 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 DUOXA1-205ENST00000558422 1678 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 ACTL8-202ENST00000617065 1670 ntAPPRIS P1 TSL 2 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 ITGB4-206ENST00000579662 5554 ntAPPRIS ALT2 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 CICP16-201ENST00000502609 2813 ntBASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 LINC00639-201ENST00000553932 4496 ntTSL 2 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 FAHD2B-201ENST00000272610 1305 ntAPPRIS P1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 FERMT3-202ENST00000345728 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 ZNF570-202ENST00000586475 1985 ntTSL 1 (best) BASIC15.15■□□□□ 0.02
TRMT13Q9NUP7 ATP2A3-204ENST00000397035 4182 ntTSL 5 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 NACC2-201ENST00000277554 6899 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 EPHA5-202ENST00000354839 3427 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 AC092506.1-201ENST00000634580 2275 ntTSL 5 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 LILRP2-202ENST00000413572 1383 ntBASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 WASH7P-201ENST00000488147 1351 ntBASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 DNAJC7-202ENST00000426588 1774 ntTSL 2 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 TMEM143-201ENST00000293261 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 EHHADH-203ENST00000456310 2577 ntTSL 2 BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 TNRC18P2-201ENST00000417666 2714 ntBASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 RCN2-203ENST00000394885 6347 ntAPPRIS P1 TSL 1 (best) BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC15.14■□□□□ 0.01
TRMT13Q9NUP7 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.14■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 42.2 ms