Protein–RNA interactions for Protein: Q9C0K7

STRADB, STE20-related kinase adapter protein beta, humanhuman

Predictions only

Length 418 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
STRADBQ9C0K7 BRF1-205ENST00000440513 2368 ntTSL 2 BASIC13.21□□□□□ -0.3
STRADBQ9C0K7 AGAP4-208ENST00000618171 2387 ntTSL 5 BASIC13.21□□□□□ -0.3
STRADBQ9C0K7 MC1R-202ENST00000555147 3099 ntAPPRIS P1 BASIC13.21□□□□□ -0.3
STRADBQ9C0K7 NUDT4-201ENST00000337179 9753 ntAPPRIS P3 TSL 1 (best) BASIC13.21□□□□□ -0.3
STRADBQ9C0K7 MAPT-206ENST00000415613 2331 ntAPPRIS ALT2 TSL 5 BASIC13.21□□□□□ -0.3
STRADBQ9C0K7 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 PCK2-208ENST00000559250 1804 ntTSL 5 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 ZNF862-201ENST00000223210 6950 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 CPN2-202ENST00000429275 2008 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 UBE2D4-201ENST00000222402 3974 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 TRIM67-201ENST00000366653 3936 ntAPPRIS P2 TSL 1 (best) BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 FLII-201ENST00000327031 4338 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 KCNG3-202ENST00000394973 3656 ntAPPRIS ALT1 TSL 1 (best) BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 CHRNA2-201ENST00000240132 1735 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 PUS1-202ENST00000376649 4094 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 TMEM132C-201ENST00000435159 4947 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 DMTN-202ENST00000358242 2772 ntTSL 5 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 TNNT3-201ENST00000278317 1210 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 IFITM1-201ENST00000328221 844 ntAPPRIS P1 TSL 3 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 U3.5-201ENST00000363448 216 ntBASIC13.2□□□□□ -0.3
STRADBQ9C0K7 WFDC5-202ENST00000372789 1018 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 TNNT3-207ENST00000381589 1060 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 IFITM1-202ENST00000408968 855 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 AC041040.1-201ENST00000425197 460 ntBASIC13.2□□□□□ -0.3
STRADBQ9C0K7 AC104961.1-201ENST00000427605 771 ntBASIC13.2□□□□□ -0.3
STRADBQ9C0K7 HNRNPA1P2-207ENST00000432375 960 ntBASIC13.2□□□□□ -0.3
STRADBQ9C0K7 AL132657.1-201ENST00000432530 712 ntTSL 3 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 AL137026.2-201ENST00000437014 841 ntTSL 2 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 AL121787.1-202ENST00000445838 876 ntTSL 5 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 NALT1-202ENST00000450304 437 ntTSL 3 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 AC015818.1-201ENST00000451011 244 ntBASIC13.2□□□□□ -0.3
STRADBQ9C0K7 AL445471.1-201ENST00000456316 820 ntTSL 5 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 MIR5001-201ENST00000580185 100 ntBASIC13.2□□□□□ -0.3
STRADBQ9C0K7 ZNF737-204ENST00000596797 569 ntTSL 4 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 ADH1B-207ENST00000639454 1210 ntTSL 5 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 AC139713.2-207ENST00000641556 1292 ntBASIC13.2□□□□□ -0.3
STRADBQ9C0K7 CACNA2D1-202ENST00000356860 7563 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 EPB41L3-206ENST00000544123 3972 ntAPPRIS ALT2 TSL 2 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 LAP3-210ENST00000606142 1876 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 CFLAR-204ENST00000341582 2056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 PRC1-204ENST00000442656 2060 ntTSL 2 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 WDR25-204ENST00000554175 2055 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 ZNF100-201ENST00000305570 2283 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 LRRC20-204ENST00000373224 3095 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 PAWR-201ENST00000328827 9129 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 ITGB4-202ENST00000449880 5689 ntAPPRIS P3 TSL 1 (best) BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 AC004754.1-201ENST00000600536 2242 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 AC004922.1-201ENST00000638617 2430 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 ZXDC-202ENST00000389709 3405 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 AC009053.1-204ENST00000429810 2355 ntTSL 2 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 BBS1-203ENST00000455748 1552 ntTSL 2 BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
STRADBQ9C0K7 TECPR1-204ENST00000447648 6564 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 WWTR1-203ENST00000465804 5030 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 MCRS1-201ENST00000343810 1928 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 TPD52-201ENST00000379096 4041 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 PALD1-201ENST00000263563 4555 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 EZH2-202ENST00000350995 2477 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 FOXI2-201ENST00000388920 3217 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 NUP160-201ENST00000378460 5376 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 HOXA3-201ENST00000317201 2761 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 SPAG1-202ENST00000388798 3852 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 EXO5-203ENST00000372703 2567 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 AC138517.2-201ENST00000637503 2594 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 SSTR2-201ENST00000357585 7683 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 KCNK9-201ENST00000303015 1245 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 KRTAP6-1-201ENST00000329122 500 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 HIST1H4B-201ENST00000377745 438 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 COLEC11-204ENST00000402794 1134 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 AC092570.1-201ENST00000414446 469 ntBASIC13.19□□□□□ -0.3
STRADBQ9C0K7 RAD51C-203ENST00000421782 567 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 EFNA4-203ENST00000427683 1052 ntAPPRIS ALT2 TSL 2 BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 AC079250.1-201ENST00000456046 531 ntBASIC13.19□□□□□ -0.3
STRADBQ9C0K7 AC025171.3-201ENST00000509036 472 ntTSL 2 BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 AP003351.1-201ENST00000522743 668 ntTSL 3 BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 C10orf113-201ENST00000529198 614 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 AP000866.5-201ENST00000531241 445 ntTSL 5 BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 NR4A1-209ENST00000548232 1101 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 AC004801.1-201ENST00000549557 360 ntBASIC13.19□□□□□ -0.3
STRADBQ9C0K7 TPM1-220ENST00000559556 977 ntAPPRIS ALT1 TSL 2 BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 MBP-238ENST00000580402 915 ntTSL 5 BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 AC148477.9-201ENST00000623974 539 ntBASIC13.19□□□□□ -0.3
STRADBQ9C0K7 RARS-210ENST00000626454 177 ntTSL 5 BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 NHLH2-202ENST00000369506 7226 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 RABGAP1L-201ENST00000251507 2899 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 DDC-AS1-201ENST00000454521 1776 ntTSL 2 BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 PRKCB-201ENST00000303531 7969 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 FADS1-206ENST00000460649 1559 ntTSL 2 BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 ABAT-215ENST00000569156 1911 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
STRADBQ9C0K7 ARL8B-208ENST00000611208 2981 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 52.4 ms