Protein–RNA interactions for Protein: Q9BZL3

SMIM3, Small integral membrane protein 3, humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM3Q9BZL3 TNNC2-201ENST00000372555 710 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 AL133410.2-201ENST00000425499 696 ntTSL 5 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 TMEM147-AS1-201ENST00000444728 487 ntTSL 3 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 SPDYE18-201ENST00000510091 1050 ntBASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 AP000344.2-201ENST00000512987 629 ntBASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 AP000763.4-201ENST00000544674 752 ntTSL 5 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 PIGH-209ENST00000559581 1049 ntTSL 4 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 AC120045.2-201ENST00000567334 178 ntBASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 AC129507.1-201ENST00000570711 1013 ntTSL 2 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 IFT20-206ENST00000578122 834 ntTSL 2 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 IFT20-208ENST00000578985 831 ntTSL 3 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 MIR4469-201ENST00000583919 79 ntBASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 MZF1-202ENST00000594108 1110 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 AC005785.1-202ENST00000597164 237 ntTSL 3 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 HIST1H2BO-201ENST00000616182 381 ntAPPRIS P1 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 ABBA01031660.1-201ENST00000635219 756 ntBASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 ANKRD17-202ENST00000358602 10784 ntAPPRIS P4 TSL 5 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 INPP5J-208ENST00000412277 3512 ntTSL 2 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 CILP-201ENST00000261883 5695 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 FAM225B-201ENST00000423546 5629 ntTSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 DNAH10OS-201ENST00000514254 5040 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 ACSM2B-201ENST00000329697 2935 ntAPPRIS P1 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 CNTROB-203ENST00000565740 2783 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 RNF217-210ENST00000521654 11325 ntAPPRIS P2 TSL 2 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 EME1-202ENST00000393271 2354 ntAPPRIS ALT2 TSL 5 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 NPLOC4-202ENST00000374747 5538 ntTSL 2 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 MINK1-203ENST00000453408 3939 ntAPPRIS ALT2 TSL 1 (best) BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 AC018445.4-201ENST00000624066 2291 ntBASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 C12orf76-205ENST00000548191 2204 ntAPPRIS P1 TSL 2 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 LINC01544-201ENST00000567801 5168 ntTSL 2 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 UBP1-204ENST00000447368 3669 ntAPPRIS ALT1 TSL 2 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 SHANK2-218ENST00000601538 9062 ntAPPRIS P1 TSL 5 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 INTS4P2-202ENST00000614726 2019 ntBASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 ZC3H18-202ENST00000452588 3211 ntTSL 2 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 FAM184A-211ENST00000521531 3244 ntTSL 5 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 AP000552.1-203ENST00000416615 1930 ntTSL 5 BASIC11.47□□□□□ -0.57
SMIM3Q9BZL3 SARS-201ENST00000234677 1852 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 ATXN2-226ENST00000608853 4376 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 RTEL1-211ENST00000508582 4273 ntTSL 2 BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 LAMB3-201ENST00000356082 4055 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 ESRRB-204ENST00000509242 2849 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 LINC00094-204ENST00000599836 1689 ntAPPRIS P5 BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 CNBP-208ENST00000504813 1549 ntAPPRIS ALT1 TSL 2 BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 HSP90AA1-202ENST00000334701 3510 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 FBP1-203ENST00000415431 1487 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 FBF1-210ENST00000592193 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 AC026992.2-203ENST00000563004 2419 ntBASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 HYOU1-221ENST00000621959 3358 ntTSL 2 BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 AC009093.10-201ENST00000641956 1442 ntBASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 EPB41L1-212ENST00000441639 5967 ntTSL 5 BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 GLUL-204ENST00000417584 4065 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 CLUHP2-201ENST00000426660 1303 ntBASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 TCEAL2-201ENST00000329035 1080 ntAPPRIS P1 TSL 5 BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 SIVA1-202ENST00000347067 550 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 PNRC2-202ENST00000374468 814 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 C22orf39-203ENST00000399568 1005 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 HNRNPA3P1-201ENST00000401429 1139 ntBASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 JMJD7-203ENST00000408047 1192 ntTSL 5 BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 CDRT15-201ENST00000420162 766 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 DIRC3-201ENST00000423123 552 ntAPPRIS P1 TSL 4 BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 CDRT15-202ENST00000431716 655 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 HNRNPA3P5-201ENST00000455201 833 ntBASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 RN7SL399P-201ENST00000471648 279 ntBASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 C1QB-203ENST00000509305 1254 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 STT3A-AS1-201ENST00000530526 429 ntTSL 3 BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 AC069262.1-201ENST00000539058 672 ntBASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 MPI-209ENST00000564003 1195 ntTSL 2 BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 RARRES2P5-201ENST00000564013 466 ntBASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 SSH2-210ENST00000582084 560 ntTSL 3 BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 APOBEC3H-206ENST00000613677 730 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 OR2T27-203ENST00000641652 1285 ntAPPRIS P1 BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 DDX5-210ENST00000578804 2021 ntTSL 1 (best) BASIC11.46□□□□□ -0.57
SMIM3Q9BZL3 MOB3C-201ENST00000271139 2800 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SMIM3Q9BZL3 RALGDS-203ENST00000372062 3596 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
SMIM3Q9BZL3 AC020917.4-201ENST00000623994 1999 ntBASIC11.46□□□□□ -0.58
SMIM3Q9BZL3 CCDC144A-204ENST00000360524 5830 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMIM3Q9BZL3 C1RL-201ENST00000266542 3394 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMIM3Q9BZL3 GLP2R-204ENST00000574745 1882 ntTSL 2 BASIC11.46□□□□□ -0.58
SMIM3Q9BZL3 BDNF-202ENST00000356660 4018 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMIM3Q9BZL3 YWHAEP7-202ENST00000620903 2455 ntTSL 2 BASIC11.46□□□□□ -0.58
SMIM3Q9BZL3 CCDC3-202ENST00000378839 3180 ntAPPRIS ALT2 TSL 2 BASIC11.46□□□□□ -0.58
SMIM3Q9BZL3 HMGCS2-201ENST00000369406 2428 ntAPPRIS P1 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMIM3Q9BZL3 GALNT15-203ENST00000437509 2416 ntTSL 1 (best) BASIC11.46□□□□□ -0.58
SMIM3Q9BZL3 POLE-201ENST00000320574 7840 ntAPPRIS P2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMIM3Q9BZL3 ARHGEF9-203ENST00000374872 2364 ntTSL 2 BASIC11.46□□□□□ -0.58
SMIM3Q9BZL3 CATSPERE-202ENST00000366533 3019 ntAPPRIS P3 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMIM3Q9BZL3 MTUS2-206ENST00000612955 7430 ntAPPRIS ALT2 TSL 5 BASIC11.46□□□□□ -0.58
SMIM3Q9BZL3 USP11-204ENST00000377107 3515 ntAPPRIS ALT2 TSL 1 (best) BASIC11.46□□□□□ -0.58
SMIM3Q9BZL3 CCDC51-201ENST00000395694 1560 ntAPPRIS P1 TSL 2 BASIC11.45□□□□□ -0.58
Retrieved 100 of 98,524 protein–RNA pairs in 56.3 ms