Protein–RNA interactions for Protein: Q9BZ76

CNTNAP3, Contactin-associated protein-like 3, humanhuman

Predictions only

Length 1,288 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CNTNAP3Q9BZ76 MIOS-201ENST00000340080 3453 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 BUD13-201ENST00000260210 2196 ntAPPRIS P3 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 NUP50-201ENST00000347635 5233 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 CYP4F3-203ENST00000586182 2338 ntAPPRIS ALT1 TSL 2 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 PMPCB-201ENST00000249269 2472 ntAPPRIS P1 TSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 CTNS-202ENST00000381870 2470 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 AC003102.2-201ENST00000589195 1469 ntBASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 STIP1-207ENST00000538945 1900 ntTSL 2 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 NDRG2-206ENST00000397844 2096 ntTSL 1 (best) BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 SRC-202ENST00000373558 4304 ntTSL 5 BASIC13.35□□□□□ -0.27
CNTNAP3Q9BZ76 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 PERM1-201ENST00000341290 3035 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 MAGEA12-201ENST00000357916 1664 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 PPRC1-203ENST00000413464 4580 ntTSL 2 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 ELP4-223ENST00000640342 1392 ntTSL 5 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 DNM1-203ENST00000393594 3245 ntAPPRIS ALT1 TSL 2 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 MAP3K8-201ENST00000263056 3096 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 CA10-201ENST00000285273 2914 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 TBRG4-215ENST00000494076 2190 ntAPPRIS P1 TSL 2 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 AP000550.1-201ENST00000420508 4833 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 ARHGAP11B-210ENST00000622744 2042 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 DLEU2-201ENST00000235290 1739 ntTSL 5 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 RECQL5-202ENST00000340830 1749 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 CTLA4-201ENST00000295854 525 ntTSL 5 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 GAPDH-202ENST00000396856 1266 ntTSL 5 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 VPREB1-202ENST00000403807 755 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 IL6RP1-201ENST00000417848 1273 ntBASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 AL009181.1-201ENST00000418471 1085 ntTSL 5 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 RPS27L-203ENST00000439025 970 ntTSL 2 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 AL136084.1-201ENST00000449172 318 ntBASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 AL161727.1-201ENST00000457409 530 ntBASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 RN7SL148P-201ENST00000467120 279 ntBASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 AC108112.1-201ENST00000505567 659 ntTSL 5 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 AC097110.1-201ENST00000507344 768 ntTSL 2 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 WWC2-208ENST00000508747 1216 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 AC100858.1-201ENST00000514059 1228 ntBASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 AC084024.3-201ENST00000520598 562 ntTSL 4 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 AP002336.2-201ENST00000528607 539 ntTSL 5 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 TPP1-209ENST00000528657 578 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 ZNF268-208ENST00000539248 759 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 ZNF268-212ENST00000542711 861 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 AC079174.1-201ENST00000552486 312 ntTSL 3 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 CLDN6-203ENST00000572154 461 ntTSL 3 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 PSME3-213ENST00000592169 826 ntTSL 3 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 SMIM26-203ENST00000608034 670 ntAPPRIS ALT2 TSL 3 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 AC137936.2-202ENST00000638124 1146 ntTSL 5 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 ADORA1-201ENST00000309502 2896 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 ZSCAN21-203ENST00000456748 1904 ntTSL 5 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 TGM6-201ENST00000202625 2292 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 OIT3-202ENST00000622652 1602 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 SRP9-201ENST00000304786 1480 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 LPAR1-203ENST00000374431 3637 ntAPPRIS P2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 STRA6-218ENST00000574278 2455 ntTSL 2 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 TUBA3GP-201ENST00000410028 1325 ntBASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 TGFB1I1-202ENST00000394858 1803 ntAPPRIS P3 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 KRT77-201ENST00000341809 3305 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 KIR3DL2-201ENST00000270442 1546 ntAPPRIS ALT2 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 SGCE-205ENST00000437425 1508 ntTSL 2 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 SLC4A3-202ENST00000317151 4069 ntAPPRIS P1 TSL 5 BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 EXOC6B-202ENST00000410104 5795 ntTSL 1 (best) BASIC13.34□□□□□ -0.27
CNTNAP3Q9BZ76 MTFMT-201ENST00000220058 2734 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.27
CNTNAP3Q9BZ76 TICRR-202ENST00000560985 6656 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CNTNAP3Q9BZ76 BAG1-210ENST00000634734 3786 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.27
CNTNAP3Q9BZ76 NRP2-203ENST00000357785 2926 ntAPPRIS P4 TSL 1 (best) BASIC13.33□□□□□ -0.27
CNTNAP3Q9BZ76 SESN3-201ENST00000278499 1710 ntTSL 2 BASIC13.33□□□□□ -0.27
CNTNAP3Q9BZ76 MAGEA2B-202ENST00000370293 1714 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.27
CNTNAP3Q9BZ76 AC232323.1-201ENST00000540724 2099 ntBASIC13.33□□□□□ -0.27
CNTNAP3Q9BZ76 PRRT2-207ENST00000572820 2403 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.27
CNTNAP3Q9BZ76 GNAO1-201ENST00000262493 3337 ntAPPRIS P5 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 RAPGEFL1-202ENST00000456989 1582 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 PPP3CA-207ENST00000512215 4007 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 TCP11L1-201ENST00000334274 2817 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 CCDC22-201ENST00000376227 2319 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 NFATC1-218ENST00000592223 2531 ntAPPRIS ALT2 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 CACNA1A-211ENST00000592864 1623 ntTSL 3 BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 ZFPM2-206ENST00000520492 3960 ntTSL 2 BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 LXN-201ENST00000264265 1116 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 MRPL55-209ENST00000366735 1212 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 CDRT15L2-201ENST00000399044 1048 ntAPPRIS P1 TSL 2 BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 ATP6V1E1-202ENST00000399796 1208 ntTSL 2 BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 ATRAID-202ENST00000405489 1059 ntTSL 1 (best) BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 MED19-202ENST00000431606 1203 ntAPPRIS P1 TSL 1 (best) BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 AL133351.2-201ENST00000437718 484 ntTSL 2 BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 LINC00972-202ENST00000438065 788 ntTSL 3 BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 RBM14-205ENST00000443702 732 ntTSL 3 BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 AC004889.1-201ENST00000498693 856 ntTSL 5 BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.33□□□□□ -0.28
CNTNAP3Q9BZ76 AC068672.2-201ENST00000524022 336 ntTSL 3 BASIC13.33□□□□□ -0.28
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms