Protein–RNA interactions for Protein: Q99985

SEMA3C, Semaphorin-3C, humanhuman

Predictions only

Length 751 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3CQ99985 CST5-201ENST00000304710 756 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA3CQ99985 IGHV1-3-201ENST00000390595 395 ntAPPRIS P1 BASIC14.2□□□□□ -0.14
SEMA3CQ99985 CALCA-203ENST00000396372 581 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA3CQ99985 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.2□□□□□ -0.14
SEMA3CQ99985 RPL3-202ENST00000401609 1289 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA3CQ99985 ALKBH2-203ENST00000440112 574 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA3CQ99985 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA3CQ99985 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC14.2□□□□□ -0.14
SEMA3CQ99985 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA3CQ99985 AC095040.1-201ENST00000513286 675 ntBASIC14.2□□□□□ -0.14
SEMA3CQ99985 AC134698.3-201ENST00000523880 214 ntBASIC14.2□□□□□ -0.14
SEMA3CQ99985 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC14.2□□□□□ -0.14
SEMA3CQ99985 HS3ST3A1-202ENST00000578576 750 ntTSL 3 BASIC14.2□□□□□ -0.14
SEMA3CQ99985 RN7SL665P-201ENST00000578793 300 ntBASIC14.2□□□□□ -0.14
SEMA3CQ99985 AL121956.4-201ENST00000629925 581 ntTSL 5 BASIC14.2□□□□□ -0.14
SEMA3CQ99985 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA3CQ99985 ALPL-206ENST00000539907 2241 ntTSL 2 BASIC14.2□□□□□ -0.14
SEMA3CQ99985 PIGC-201ENST00000344529 1447 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA3CQ99985 METTL17-201ENST00000339374 1749 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA3CQ99985 API5-208ENST00000531273 1868 ntTSL 2 BASIC14.2□□□□□ -0.14
SEMA3CQ99985 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC14.2□□□□□ -0.14
SEMA3CQ99985 YTHDF2-201ENST00000373812 2925 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA3CQ99985 PHTF1-203ENST00000369600 3075 ntTSL 5 BASIC14.2□□□□□ -0.14
SEMA3CQ99985 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA3CQ99985 ABCA7-202ENST00000433129 6704 ntAPPRIS P2 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA3CQ99985 ERGIC3-203ENST00000357394 1357 ntAPPRIS P4 TSL 2 BASIC14.2□□□□□ -0.14
SEMA3CQ99985 METTL7B-202ENST00000614691 1368 ntTSL 5 BASIC14.2□□□□□ -0.14
SEMA3CQ99985 HLA-DQB1-202ENST00000399079 1501 ntBASIC14.2□□□□□ -0.14
SEMA3CQ99985 SLC25A29-208ENST00000554912 5169 ntTSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA3CQ99985 CXorf40A-212ENST00000514208 1840 ntAPPRIS ALT1 TSL 5 BASIC14.2□□□□□ -0.14
SEMA3CQ99985 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC14.2□□□□□ -0.14
SEMA3CQ99985 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA3CQ99985 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC14.2□□□□□ -0.14
SEMA3CQ99985 MED20-201ENST00000265350 2438 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.14
SEMA3CQ99985 MAGI3-202ENST00000369611 3596 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 TMEM173-201ENST00000330794 1771 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 NCKIPSD-204ENST00000416649 2925 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 DSEL-201ENST00000310045 9531 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 PLEKHO2-202ENST00000616065 3569 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 DNAJC14-203ENST00000357606 3416 ntAPPRIS P1 TSL 5 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 ATF4-202ENST00000396680 1419 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 LRRC8D-201ENST00000337338 3950 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 PEG13-201ENST00000631594 5667 ntBASIC14.19□□□□□ -0.14
SEMA3CQ99985 AC091046.1-201ENST00000331871 207 ntBASIC14.19□□□□□ -0.14
SEMA3CQ99985 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 BCL2L11-202ENST00000337565 720 ntTSL 5 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 CD1E-202ENST00000368155 696 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 CD1E-204ENST00000368157 399 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 FMR1NB-201ENST00000370467 1021 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 AC073316.1-202ENST00000402115 988 ntTSL 5 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 LINC00265-2P-201ENST00000413372 782 ntBASIC14.19□□□□□ -0.14
SEMA3CQ99985 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 AC098934.1-203ENST00000442868 1262 ntBASIC14.19□□□□□ -0.14
SEMA3CQ99985 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 AC234782.1-201ENST00000451950 919 ntBASIC14.19□□□□□ -0.14
SEMA3CQ99985 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 PTGR1-209ENST00000538962 1200 ntTSL 2 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 PSORS1C1-206ENST00000547221 655 ntAPPRIS ALT2 TSL 3 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 AC135782.2-201ENST00000562040 472 ntTSL 3 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 AL133499.1-201ENST00000596207 608 ntBASIC14.19□□□□□ -0.14
SEMA3CQ99985 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 C10orf71-201ENST00000374144 5230 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 MED6-201ENST00000256379 1995 ntAPPRIS P2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 FAM230C-201ENST00000623511 1970 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 FSTL4-207ENST00000621681 2660 ntTSL 5 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 SSBP2-220ENST00000615665 4465 ntTSL 5 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 ZSCAN2-202ENST00000327179 2390 ntAPPRIS ALT1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 CDH1-201ENST00000261769 4889 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 CBFA2T3-202ENST00000327483 4033 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 PPIL3-201ENST00000286175 1370 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 NOP9-201ENST00000267425 6033 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 STK25-235ENST00000543554 2556 ntTSL 2 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 GOT2-202ENST00000434819 1615 ntTSL 2 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 FAM224A-201ENST00000419557 2031 ntTSL 2 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC14.19□□□□□ -0.14
SEMA3CQ99985 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 OTOF-202ENST00000338581 4954 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC14.19□□□□□ -0.14
SEMA3CQ99985 LAIR1-201ENST00000348231 1467 ntAPPRIS ALT2 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEMA3CQ99985 UBBP4-202ENST00000584755 1459 ntTSL 1 (best) BASIC14.18□□□□□ -0.14
SEMA3CQ99985 AC025183.3-201ENST00000623526 1482 ntBASIC14.18□□□□□ -0.14
SEMA3CQ99985 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.18□□□□□ -0.14
SEMA3CQ99985 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SEMA3CQ99985 DTX3L-201ENST00000296161 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEMA3CQ99985 ATG9A-204ENST00000409422 2512 ntTSL 5 BASIC14.18□□□□□ -0.14
SEMA3CQ99985 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC14.18□□□□□ -0.14
SEMA3CQ99985 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC14.18□□□□□ -0.14
SEMA3CQ99985 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.18□□□□□ -0.14
SEMA3CQ99985 APBB1-221ENST00000609360 2642 ntAPPRIS ALT1 TSL 5 BASIC14.18□□□□□ -0.14
Retrieved 100 of 98,524 protein–RNA pairs in 32.8 ms