Protein–RNA interactions for Protein: Q96JM3

CHAMP1, Chromosome alignment-maintaining phosphoprotein 1, humanhuman

Predictions only

Length 812 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHAMP1Q96JM3 AL450998.2-201ENST00000418525 639 ntTSL 3 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 ACTBP11-201ENST00000436287 1126 ntBASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 GGTLC2-202ENST00000448514 678 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 PRSS30P-202ENST00000475030 752 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 PRSS30P-205ENST00000506153 699 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 AC126768.2-201ENST00000511693 718 ntTSL 3 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 CEP57L1-208ENST00000519095 908 ntTSL 3 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 CD74-212ENST00000524315 584 ntTSL 5 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 AC116456.1-201ENST00000526646 815 ntTSL 3 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 AP002992.1-201ENST00000527519 491 ntTSL 3 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 USB1-203ENST00000539737 1212 ntTSL 2 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 C12orf57-206ENST00000544681 980 ntTSL 2 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 GADD45B-204ENST00000587345 765 ntTSL 2 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 MAP3K14-AS1-210ENST00000592422 831 ntTSL 3 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 AL512343.1-201ENST00000605837 169 ntBASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 AC133540.1-201ENST00000620845 1019 ntBASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 AC106017.2-201ENST00000631194 1173 ntTSL 2 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 FGGY-201ENST00000303721 1976 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 OSCP1-204ENST00000433045 1381 ntTSL 5 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 RHPN1-AS1-201ENST00000518049 1918 ntBASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 COG5-202ENST00000347053 4532 ntAPPRIS ALT2 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 FAM78A-203ENST00000372271 3966 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 AL122018.1-201ENST00000446607 2310 ntBASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 KIF9-208ENST00000452770 2707 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 ORC6-201ENST00000219097 1628 ntAPPRIS P1 TSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 RPS6KC1-208ENST00000614059 4188 ntTSL 1 (best) BASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 TRIM80P-201ENST00000455685 2848 ntBASIC16.23■□□□□ 0.19
CHAMP1Q96JM3 ZNRD1ASP-217ENST00000437417 1497 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 AC237221.1-201ENST00000561575 1881 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 PLD5-204ENST00000442594 3305 ntAPPRIS P3 TSL 5 BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 DLX1-201ENST00000341900 2130 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 NEK11-209ENST00000510688 2754 ntAPPRIS ALT2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 CHDH-201ENST00000315251 7665 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 TVP23C-CDRT4-203ENST00000522212 2833 ntAPPRIS P1 TSL 2 BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 ABCC4-206ENST00000536256 2840 ntTSL 2 BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 AL031432.4-201ENST00000641729 2190 ntBASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 CCDC127-201ENST00000296824 9342 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 LAMTOR4-201ENST00000341942 605 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 UBE2T-201ENST00000367274 922 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 ZG16B-201ENST00000382280 831 ntAPPRIS P2 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 TPT1-AS1-203ENST00000412946 744 ntTSL 3 BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 GLYCTK-203ENST00000461183 889 ntTSL 3 BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 AC009487.3-201ENST00000505579 560 ntTSL 4 BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 HNRNPA1P36-201ENST00000521313 955 ntBASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 AL355310.3-201ENST00000526411 582 ntTSL 3 BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 TPD52L1-214ENST00000534199 811 ntTSL 2 BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 AP003065.1-201ENST00000540912 562 ntTSL 4 BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 ZNF586-206ENST00000599802 581 ntTSL 3 BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 AL161773.1-201ENST00000624845 863 ntBASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 SLCO4C1-201ENST00000310954 5334 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 RIMS3-202ENST00000372684 7235 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 MAP2K3-203ENST00000361818 2034 ntTSL 5 BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 PACSIN2-202ENST00000337959 3149 ntTSL 5 BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 COLEC11-203ENST00000382062 1633 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 KLHL24-211ENST00000476808 2126 ntTSL 2 BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 GRIA4-210ENST00000527669 2647 ntTSL 1 (best) BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 EFHC1-227ENST00000637089 2133 ntTSL 5 BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 TRMT61A-202ENST00000389749 3229 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 CAMK2D-205ENST00000394524 5294 ntAPPRIS ALT1 TSL 2 BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 ITGA3-201ENST00000007722 3665 ntAPPRIS ALT2 TSL 5 BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 FZD5-201ENST00000295417 6708 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 OGFRL1-201ENST00000370435 8391 ntAPPRIS P1 TSL 1 (best) BASIC16.22■□□□□ 0.19
CHAMP1Q96JM3 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 LINC00327-203ENST00000576696 1308 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 OS9-201ENST00000257966 2505 ntAPPRIS ALT2 TSL 2 BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 SLC20A2-207ENST00000520179 2284 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 ZFP90-209ENST00000570495 4636 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 GRIN1-205ENST00000371555 4003 ntTSL 5 BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 MPHOSPH10-201ENST00000244230 2484 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 FGF10-AS1-201ENST00000502457 1894 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 LINC01624-203ENST00000607074 3265 ntTSL 2 BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 ATXN2L-225ENST00000570200 3635 ntAPPRIS ALT2 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 MTF2-202ENST00000370303 1951 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 ELP4-228ENST00000640954 1612 ntTSL 5 BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 RPL13A-201ENST00000391857 1181 ntAPPRIS P1 TSL 1 (best) BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 CD8B-204ENST00000393759 1096 ntTSL 1 (best) BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 ECSIT-203ENST00000417981 970 ntTSL 2 BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 OLR1-203ENST00000432556 950 ntTSL 2 BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 HVCN1-203ENST00000439744 1215 ntTSL 2 BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 RPL18P13-201ENST00000478088 569 ntBASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 LIMS3-203ENST00000480744 1197 ntAPPRIS P1 TSL 5 BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 AC136475.5-202ENST00000524824 587 ntTSL 4 BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 BLOC1S1-205ENST00000551926 531 ntTSL 5 BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 AL122035.1-201ENST00000556640 550 ntTSL 2 BASIC16.21■□□□□ 0.19
CHAMP1Q96JM3 CYBA-208ENST00000567174 1085 ntTSL 2 BASIC16.21■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 34.8 ms