Protein–RNA interactions for Protein: Q96AA3

RFT1, Protein RFT1 homolog, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFT1Q96AA3 CELF2-216ENST00000637215 2724 ntTSL 5 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 CACNA1G-209ENST00000502264 6921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 CACNA1G-221ENST00000510115 6912 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 DLGAP3-202ENST00000373347 3856 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 MUC20-203ENST00000436408 2463 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 TCL1A-203ENST00000554012 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 NCR1-201ENST00000291890 1155 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 CSF2-201ENST00000296871 787 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 FOXR1-201ENST00000317011 1159 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 NCR1-202ENST00000338835 973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 NCR1-203ENST00000350790 739 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 ITPA-201ENST00000380113 1185 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 ITPA-202ENST00000399838 897 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 CD8B2-202ENST00000417670 633 ntBASIC12.47□□□□□ -0.41
RFT1Q96AA3 AC003958.1-201ENST00000435883 421 ntBASIC12.47□□□□□ -0.41
RFT1Q96AA3 AL606760.2-202ENST00000452466 524 ntTSL 5 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 AC007389.4-201ENST00000454674 793 ntBASIC12.47□□□□□ -0.41
RFT1Q96AA3 CICP12-201ENST00000455801 843 ntBASIC12.47□□□□□ -0.41
RFT1Q96AA3 PRSS30P-204ENST00000489864 650 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 CDC23-208ENST00000505120 455 ntTSL 3 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 SLC45A2-204ENST00000509381 1040 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 C11orf98-201ENST00000524958 654 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 SLC25A47P1-201ENST00000531577 414 ntBASIC12.47□□□□□ -0.41
RFT1Q96AA3 OVOL1-AS1-202ENST00000532454 494 ntTSL 2 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 AC091891.1-201ENST00000560688 688 ntTSL 3 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 LDLRAD4-208ENST00000586765 844 ntTSL 2 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 C9orf50-202ENST00000619117 796 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 AC138951.2-201ENST00000623455 1161 ntBASIC12.47□□□□□ -0.41
RFT1Q96AA3 AC132938.4-201ENST00000623835 848 ntBASIC12.47□□□□□ -0.41
RFT1Q96AA3 DAO-201ENST00000228476 1756 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 KLF7-204ENST00000423015 1788 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 LINC00511-213ENST00000581549 2265 ntTSL 2 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 LRPAP1-202ENST00000500728 7819 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 KCNIP3-202ENST00000360990 2798 ntTSL 5 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 CACNA1G-222ENST00000510366 6714 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 CACNA1G-227ENST00000513964 6735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 DYSF-203ENST00000409366 6606 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 DYSF-205ENST00000409651 6636 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 AC090114.2-201ENST00000608477 7054 ntBASIC12.47□□□□□ -0.41
RFT1Q96AA3 RC3H2-205ENST00000423239 3623 ntTSL 5 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 BCAP29-201ENST00000005259 4572 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 MIEF2-201ENST00000323019 3364 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 SMPDL3B-201ENST00000373888 1548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 CELSR3-201ENST00000164024 11956 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 LRRC15-201ENST00000347624 5883 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 KCNMA1-287ENST00000640632 2808 ntTSL 2 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 NFKB1-202ENST00000394820 3693 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
RFT1Q96AA3 ATP11A-201ENST00000375630 8768 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
RFT1Q96AA3 CCT3-211ENST00000472765 1858 ntTSL 2 BASIC12.46□□□□□ -0.41
RFT1Q96AA3 PAIP2-202ENST00000394795 2297 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFT1Q96AA3 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFT1Q96AA3 MAP7D2-202ENST00000379651 3930 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFT1Q96AA3 RBP3-201ENST00000584701 4276 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFT1Q96AA3 IDH3B-212ENST00000613370 1400 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RFT1Q96AA3 AC007666.1-201ENST00000443935 1838 ntTSL 5 BASIC12.46□□□□□ -0.41
RFT1Q96AA3 ZFP36-203ENST00000597629 1786 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFT1Q96AA3 GREB1-206ENST00000396123 5296 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RFT1Q96AA3 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFT1Q96AA3 ZBED8-201ENST00000408953 2851 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
RFT1Q96AA3 EIF3K-203ENST00000545173 1327 ntAPPRIS ALT1 TSL 2 BASIC12.46□□□□□ -0.41
RFT1Q96AA3 TRIM40-207ENST00000396581 2086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFT1Q96AA3 GFRA1-204ENST00000439649 9216 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
RFT1Q96AA3 TRUB2-201ENST00000372890 5719 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFT1Q96AA3 AC073862.5-201ENST00000624129 2027 ntBASIC12.46□□□□□ -0.41
RFT1Q96AA3 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC12.46□□□□□ -0.41
RFT1Q96AA3 NME3-201ENST00000219302 1069 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFT1Q96AA3 CYTL1-201ENST00000307746 1003 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
RFT1Q96AA3 KIAA0907-201ENST00000368319 1155 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
RFT1Q96AA3 AC005229.1-201ENST00000392885 409 ntBASIC12.46□□□□□ -0.41
RFT1Q96AA3 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
RFT1Q96AA3 CC2D2B-203ENST00000423344 1241 ntTSL 2 BASIC12.46□□□□□ -0.41
RFT1Q96AA3 AL121983.1-201ENST00000424181 335 ntTSL 2 BASIC12.46□□□□□ -0.41
RFT1Q96AA3 AL161932.2-201ENST00000435436 679 ntBASIC12.46□□□□□ -0.41
RFT1Q96AA3 CCDC25-209ENST00000522915 785 ntTSL 3 BASIC12.46□□□□□ -0.41
RFT1Q96AA3 CLNS1A-210ENST00000528364 953 ntAPPRIS P1 TSL 3 BASIC12.46□□□□□ -0.41
RFT1Q96AA3 ANAPC15-208ENST00000538393 867 ntAPPRIS P3 TSL 2 BASIC12.46□□□□□ -0.41
RFT1Q96AA3 NR2C2AP-207ENST00000544883 899 ntTSL 2 BASIC12.46□□□□□ -0.41
RFT1Q96AA3 TSPAN11-204ENST00000546076 1058 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
RFT1Q96AA3 AC078819.1-201ENST00000547454 765 ntBASIC12.46□□□□□ -0.41
RFT1Q96AA3 AC012085.1-201ENST00000548270 765 ntBASIC12.46□□□□□ -0.41
RFT1Q96AA3 AC007376.2-201ENST00000556271 540 ntTSL 3 BASIC12.46□□□□□ -0.41
RFT1Q96AA3 GREM1-201ENST00000560677 623 ntTSL 4 BASIC12.46□□□□□ -0.41
RFT1Q96AA3 COX11-202ENST00000571584 1108 ntTSL 2 BASIC12.46□□□□□ -0.41
RFT1Q96AA3 FXYD6-216ENST00000584230 566 ntAPPRIS ALT1 TSL 3 BASIC12.46□□□□□ -0.41
RFT1Q96AA3 AC073413.1-201ENST00000603927 732 ntBASIC12.46□□□□□ -0.41
RFT1Q96AA3 HIST1H2AB-201ENST00000615868 393 ntAPPRIS P1 BASIC12.46□□□□□ -0.41
Retrieved 100 of 98,524 protein–RNA pairs in 146.2 ms