Protein–RNA interactions for Protein: Q8WXF7

ATL1, Atlastin-1, humanhuman

Predictions only

Length 558 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATL1Q8WXF7 AC008429.1-202ENST00000518818 2067 ntTSL 2 BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 FUT8-203ENST00000360689 5166 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 HIST1H2AJ-201ENST00000333151 387 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 MBP-201ENST00000354542 575 ntTSL 2 BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 AL022323.1-201ENST00000366110 957 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 HIST2H2AA3-201ENST00000369159 549 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 WDR3-202ENST00000369441 1035 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 NME2-206ENST00000513177 692 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 CMTM3-215ENST00000568477 687 ntTSL 3 BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 DBNDD1-206ENST00000568838 993 ntTSL 2 BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 HIST2H2AA4-201ENST00000607355 564 ntAPPRIS P1 BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 AL139424.3-202ENST00000641619 917 ntBASIC13.72□□□□□ -0.21
ATL1Q8WXF7 EDEM3-201ENST00000318130 6898 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 KARS-201ENST00000302445 2005 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 SLC9A8-201ENST00000361573 6094 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 TMEM131L-202ENST00000409663 5017 ntAPPRIS P3 TSL 5 BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 ABCA2-201ENST00000265662 8154 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 GPR61-204ENST00000527748 4921 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 ESPNL-202ENST00000409169 4441 ntTSL 5 BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 AC004554.1-201ENST00000422830 1468 ntBASIC13.72□□□□□ -0.21
ATL1Q8WXF7 FP325330.2-201ENST00000624219 5630 ntBASIC13.72□□□□□ -0.21
ATL1Q8WXF7 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 SREBF1-202ENST00000355815 4253 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 PGAM1P5-202ENST00000552554 2148 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 MON1B-201ENST00000248248 6091 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 TADA3-204ENST00000440161 1617 ntAPPRIS P1 TSL 2 BASIC13.72□□□□□ -0.21
ATL1Q8WXF7 C5orf56-206ENST00000612967 2791 ntAPPRIS ALT2 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 L2HGDH-201ENST00000261699 1377 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 UBL7-201ENST00000361351 1360 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 MPZ-204ENST00000491222 1824 ntTSL 2 BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 BRSK2-202ENST00000382179 3576 ntTSL 2 BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 HGNC:18790-201ENST00000397958 2650 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 CLUAP1-202ENST00000571025 5126 ntTSL 2 BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 GMPPB-203ENST00000480687 6108 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 RPL15-213ENST00000611050 2363 ntAPPRIS P1 TSL 4 BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 IKZF1-203ENST00000346667 5376 ntTSL 5 BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 CIPC-201ENST00000361786 4486 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 SRA1-201ENST00000336283 2107 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 IP6K2-202ENST00000340879 1185 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 MAP2K4-201ENST00000353533 3826 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 C1orf159-201ENST00000379319 1097 ntAPPRIS P3 TSL 5 BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 CYP46A4P-201ENST00000414953 267 ntBASIC13.71□□□□□ -0.21
ATL1Q8WXF7 AC116345.2-201ENST00000512837 523 ntBASIC13.71□□□□□ -0.21
ATL1Q8WXF7 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 SNHG14-213ENST00000551077 638 ntTSL 5 BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 ELP5-212ENST00000574255 671 ntTSL 2 BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 MIR4538-201ENST00000581377 78 ntBASIC13.71□□□□□ -0.21
ATL1Q8WXF7 PYY-202ENST00000592796 580 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 AC015967.2-201ENST00000624092 234 ntBASIC13.71□□□□□ -0.21
ATL1Q8WXF7 AC006435.4-201ENST00000625037 234 ntBASIC13.71□□□□□ -0.21
ATL1Q8WXF7 AL356737.1-201ENST00000634391 234 ntBASIC13.71□□□□□ -0.21
ATL1Q8WXF7 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 LINC01029-204ENST00000583106 1465 ntTSL 5 BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 PNPLA5-205ENST00000597664 2537 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 THBS2-201ENST00000366787 5811 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
ATL1Q8WXF7 ABCD1P2-201ENST00000429313 1601 ntBASIC13.71□□□□□ -0.22
ATL1Q8WXF7 MAP2K3-214ENST00000613338 2029 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ATL1Q8WXF7 TSPEAR-AS2-202ENST00000354333 2422 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ATL1Q8WXF7 PCMTD2-204ENST00000369758 3212 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ATL1Q8WXF7 AC008620.2-201ENST00000510294 1569 ntBASIC13.71□□□□□ -0.22
ATL1Q8WXF7 FAM167A-AS1-203ENST00000624614 1357 ntTSL 1 (best) BASIC13.71□□□□□ -0.22
ATL1Q8WXF7 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
ATL1Q8WXF7 BTRC-203ENST00000393441 6084 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ATL1Q8WXF7 SPATS2-223ENST00000553127 3320 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATL1Q8WXF7 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC13.7□□□□□ -0.22
ATL1Q8WXF7 AC104129.1-202ENST00000480694 4481 ntTSL 2 BASIC13.7□□□□□ -0.22
ATL1Q8WXF7 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ATL1Q8WXF7 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ATL1Q8WXF7 THAP2-201ENST00000308086 5719 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATL1Q8WXF7 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ATL1Q8WXF7 C3orf52-202ENST00000431717 2054 ntAPPRIS ALT2 TSL 2 BASIC13.7□□□□□ -0.22
ATL1Q8WXF7 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC13.7□□□□□ -0.22
ATL1Q8WXF7 ACADM-202ENST00000370841 2619 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATL1Q8WXF7 NTM-202ENST00000374786 3190 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATL1Q8WXF7 SALL4P6-201ENST00000429385 1691 ntBASIC13.7□□□□□ -0.22
ATL1Q8WXF7 C9orf47-203ENST00000375851 4837 ntAPPRIS ALT2 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATL1Q8WXF7 EML1-203ENST00000334192 4064 ntTSL 5 BASIC13.7□□□□□ -0.22
ATL1Q8WXF7 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ATL1Q8WXF7 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC13.7□□□□□ -0.22
ATL1Q8WXF7 GMPR2-206ENST00000557854 2025 ntTSL 1 (best) BASIC13.7□□□□□ -0.22
ATL1Q8WXF7 NUDT3-201ENST00000607016 9905 ntAPPRIS P1 TSL 1 (best) BASIC13.7□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 59.7 ms