Protein–RNA interactions for Protein: Q8TCU4

ALMS1, Alstrom syndrome protein 1, humanhuman

Predictions only

Length 4,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ALMS1Q8TCU4 AP001120.3-201ENST00000585729 489 ntBASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 ZNF268-219ENST00000611984 583 ntTSL 5 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 Metazoa_SRP.141-201ENST00000615072 282 ntBASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 AC020763.2-201ENST00000623155 1255 ntBASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 GABPB1-206ENST00000543881 1450 ntTSL 2 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 PRSS8-201ENST00000317508 1872 ntAPPRIS P1 TSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 NDEL1-203ENST00000402554 1858 ntTSL 5 BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 CDK20-209ENST00000605159 1860 ntTSL 1 (best) BASIC8.98□□□□□ -0.97
ALMS1Q8TCU4 PIP4K2A-201ENST00000323883 1319 ntTSL 2 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 LINC01250-201ENST00000457478 2344 ntTSL 2 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 UNQ6494-202ENST00000617436 2163 ntTSL 2 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 POU5F1-204ENST00000471529 1723 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 MAL-202ENST00000349807 705 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 TIMM23B-201ENST00000374098 1142 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 AC004112.1-201ENST00000431064 561 ntTSL 3 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 ADPGK-202ENST00000456471 808 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 AC008040.3-201ENST00000493762 1232 ntBASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 HNRNPA1P55-201ENST00000505935 955 ntBASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 AC080023.2-201ENST00000532615 208 ntBASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 AL355075.5-201ENST00000553568 890 ntBASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 Z93930.2-203ENST00000585003 516 ntBASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 AP005264.6-203ENST00000586882 1050 ntTSL 5 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 AC092069.1-201ENST00000589120 270 ntTSL 3 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 AC100788.1-201ENST00000591108 945 ntTSL 5 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 RN7SL341P-201ENST00000613745 298 ntBASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 MFSD12-215ENST00000615613 688 ntBASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 GPHB5-202ENST00000621500 543 ntAPPRIS P1 TSL 3 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 AC073585.1-201ENST00000368895 1328 ntBASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 SLC6A20-204ENST00000456124 2662 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 GMPR2-201ENST00000348719 1684 ntTSL 5 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 CREBRF-203ENST00000520420 1660 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 PKN1-202ENST00000342216 2960 ntTSL 2 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 ZNF582-201ENST00000301310 2824 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 TIGD5-201ENST00000504548 5390 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 AIPL1-207ENST00000574506 2074 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 ZNF397-209ENST00000591206 1516 ntTSL 2 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 SLCO2B1-203ENST00000428359 2368 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 CDKN2AIPNLP2-201ENST00000274516 352 ntBASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 WFDC2-202ENST00000339946 420 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 WFDC2-204ENST00000372676 614 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 MORN2-205ENST00000410014 750 ntAPPRIS P1 TSL 5 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 AL606970.2-201ENST00000434596 470 ntTSL 3 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 AC244102.2-201ENST00000597568 955 ntBASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 AC010325.1-203ENST00000636757 380 ntAPPRIS P5 TSL 5 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 MTA1-202ENST00000405646 2709 ntAPPRIS ALT2 TSL 5 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 HPGD-204ENST00000504433 1910 ntTSL 2 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 SFT2D3-201ENST00000310981 3735 ntAPPRIS P1 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 ZNF777-201ENST00000247930 3233 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 DMTN-204ENST00000415253 2394 ntTSL 5 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 AC023157.3-201ENST00000619086 2088 ntBASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 AKAP1-202ENST00000337714 3970 ntAPPRIS P1 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 LRCH2-202ENST00000538422 4868 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 HNRNPL-210ENST00000600873 1633 ntTSL 5 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 GEMIN8-203ENST00000398355 1119 ntAPPRIS P2 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 FTH1P19-201ENST00000402402 528 ntBASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 TRBV22-1-201ENST00000424543 337 ntBASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 RN7SL483P-201ENST00000478417 285 ntBASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 CSRP1-219ENST00000533432 1149 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 AL391832.3-201ENST00000549744 846 ntTSL 3 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 EGLN3-209ENST00000553215 1004 ntTSL 1 (best) BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 AC025048.4-201ENST00000589740 699 ntTSL 3 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 DLGAP1-214ENST00000539435 2402 ntTSL 2 BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 C21orf58-204ENST00000397682 2941 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 PIP5K1C-202ENST00000537021 3326 ntAPPRIS ALT2 TSL 1 (best) BASIC8.97□□□□□ -0.97
ALMS1Q8TCU4 AC023830.3-201ENST00000612995 1455 ntBASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 FGFR3-210ENST00000613647 4438 ntTSL 5 BASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 ADO-201ENST00000373783 3627 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 LTBP4-201ENST00000204005 5032 ntAPPRIS ALT2 TSL 1 (best) BASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 FCER1A-201ENST00000368114 765 ntTSL 3 BASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 POLR1C-202ENST00000372344 1119 ntTSL 5 BASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 TRGV4-201ENST00000390345 688 ntAPPRIS P1 BASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 AL121983.2-204ENST00000430592 448 ntTSL 3 BASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 CNTFR-AS1-201ENST00000436360 892 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 CNTFR-AS1-203ENST00000453642 723 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 EEF1GP1-201ENST00000457231 1299 ntBASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 RN7SL225P-201ENST00000464648 298 ntBASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 AC069503.1-201ENST00000538710 816 ntTSL 2 BASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 CBX3P4-202ENST00000540428 423 ntTSL 2 BASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 MRRF-201ENST00000297908 1841 ntTSL 2 BASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 SYT17-201ENST00000355377 3081 ntAPPRIS P3 TSL 1 (best) BASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 VOPP1-217ENST00000625836 1400 ntTSL 2 BASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 VWA3B-221ENST00000614454 1542 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 RPH3AL-201ENST00000323434 2809 ntTSL 1 (best) BASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 TRAP1-201ENST00000246957 2296 ntAPPRIS P1 TSL 1 (best) BASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 ZFAND6-222ENST00000613266 1729 ntAPPRIS P1 TSL 3 BASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC8.96□□□□□ -0.97
ALMS1Q8TCU4 CDC42EP4-202ENST00000439510 2879 ntTSL 2 BASIC8.96□□□□□ -0.98
Retrieved 100 of 98,524 protein–RNA pairs in 38.6 ms