Protein–RNA interactions for Protein: Q8IUD6

RNF135, E3 ubiquitin-protein ligase RNF135, humanhuman

Predictions only

Length 432 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF135Q8IUD6 ZBTB1-201ENST00000358738 4119 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 ATL3-203ENST00000538786 1920 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 RBFOX3-203ENST00000580155 1519 ntAPPRIS P2 TSL 2 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 ACTG1P17-202ENST00000560958 1662 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 ARHGAP36-201ENST00000276211 3083 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 IRF9-202ENST00000396864 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 AGAP1-201ENST00000304032 10832 ntAPPRIS ALT2 TSL 5 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 RGR-203ENST00000372092 868 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 CUTA-203ENST00000374500 937 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 SAT1-201ENST00000379251 801 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 SAT1-202ENST00000379253 909 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 SAT1-203ENST00000379254 868 ntTSL 3 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 SAT1-204ENST00000379270 1065 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 LINC01022-201ENST00000415652 394 ntTSL 3 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 FTCDNL1-203ENST00000420922 772 ntAPPRIS P1 TSL 5 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 SMAD9-IT1-201ENST00000437983 504 ntTSL 3 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 AC098934.1-203ENST00000442868 1262 ntBASIC14.88□□□□□ -0.03
RNF135Q8IUD6 BPIFB5P-201ENST00000457066 1099 ntBASIC14.88□□□□□ -0.03
RNF135Q8IUD6 AC006529.1-201ENST00000459978 637 ntBASIC14.88□□□□□ -0.03
RNF135Q8IUD6 AADACL2-AS1-202ENST00000483843 628 ntTSL 5 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 HINT1-205ENST00000508488 703 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 LZTS1-AS1-201ENST00000523103 892 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 AC037486.1-201ENST00000523792 790 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 SOX21-AS1-201ENST00000438290 3287 ntTSL 2 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 RUSC1-204ENST00000368352 3403 ntAPPRIS ALT2 TSL 2 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 SLC1A6-201ENST00000221742 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 SLC22A12-203ENST00000377572 2887 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 RET-205ENST00000615310 4337 ntTSL 5 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 NOL9-201ENST00000377705 6649 ntAPPRIS P1 TSL 1 (best) BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 ATAT1-206ENST00000376485 1476 ntAPPRIS ALT1 TSL 5 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC14.88□□□□□ -0.03
RNF135Q8IUD6 KHSRPP1-201ENST00000427983 1768 ntBASIC14.88□□□□□ -0.03
RNF135Q8IUD6 NFATC4-221ENST00000555453 3169 ntAPPRIS ALT2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 TRMT10B-207ENST00000537911 2108 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 TNF-208ENST00000449264 1676 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 RADIL-201ENST00000399583 3689 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 MYOM3-202ENST00000374434 5804 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 CSNK1D-202ENST00000314028 3712 ntAPPRIS P4 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 NRP2-201ENST00000272849 5909 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 AC138969.2-201ENST00000532739 9932 ntBASIC14.87□□□□□ -0.03
RNF135Q8IUD6 AC015802.1-201ENST00000588104 1449 ntBASIC14.87□□□□□ -0.03
RNF135Q8IUD6 LEMD1-205ENST00000367154 786 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 APOA1-203ENST00000375320 940 ntAPPRIS P1 TSL 3 BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 IGF2-201ENST00000381389 1023 ntAPPRIS P2 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 PTTG1IP-202ENST00000397886 755 ntTSL 4 BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 KRTAP2-2-201ENST00000398477 733 ntAPPRIS P2 BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 CCDC12-202ENST00000425441 1097 ntAPPRIS P1 TSL 5 BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 AL663074.1-201ENST00000436642 299 ntTSL 3 BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 AL035413.1-201ENST00000437898 507 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 AL355376.1-201ENST00000456082 517 ntTSL 3 BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 AC011247.2-201ENST00000457097 233 ntTSL 4 BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 BCL2L12P1-201ENST00000508390 733 ntBASIC14.87□□□□□ -0.03
RNF135Q8IUD6 AC136601.1-201ENST00000521803 666 ntTSL 3 BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 AC124068.2-202ENST00000562356 612 ntTSL 3 BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 AC124068.2-201ENST00000569473 1109 ntBASIC14.87□□□□□ -0.03
RNF135Q8IUD6 AC012617.1-201ENST00000586345 797 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 SELENOW-212ENST00000601048 888 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 APOBEC3H-207ENST00000613996 465 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 AP000357.2-201ENST00000633827 597 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 AC007603.1-201ENST00000563124 2085 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 SPATA20-201ENST00000006658 2719 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 AC026992.2-202ENST00000565312 1934 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 ZNF365-207ENST00000410046 3379 ntTSL 2 BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 AL031595.1-201ENST00000623969 4709 ntBASIC14.87□□□□□ -0.03
RNF135Q8IUD6 MYADML-201ENST00000474610 2147 ntBASIC14.87□□□□□ -0.03
RNF135Q8IUD6 UBL4B-201ENST00000334179 1478 ntAPPRIS P1 BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 SMTN-202ENST00000347557 3130 ntTSL 1 (best) BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 BARHL2-201ENST00000370445 1979 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 AC215219.1-201ENST00000400706 1817 ntBASIC14.87□□□□□ -0.03
RNF135Q8IUD6 AC012617.1-204ENST00000586340 2305 ntBASIC14.87□□□□□ -0.03
RNF135Q8IUD6 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 LINC00339-208ENST00000634934 1518 ntTSL 5 BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 FOXP3-203ENST00000376207 2382 ntAPPRIS P1 TSL 1 (best) BASIC14.87□□□□□ -0.03
RNF135Q8IUD6 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 ARHGEF26-AS1-204ENST00000491862 2598 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 GRK6P1-201ENST00000400595 1711 ntBASIC14.86□□□□□ -0.03
RNF135Q8IUD6 CCDC43-203ENST00000588210 2067 ntAPPRIS ALT1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 NTNG1-208ENST00000370074 3048 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 PPM1L-201ENST00000295839 1449 ntTSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 MKRN3-201ENST00000314520 2337 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 SPPL3-201ENST00000353487 4148 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 PCBP2-215ENST00000549863 1619 ntTSL 5 BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 OTOS-201ENST00000319460 566 ntAPPRIS P1 TSL 5 BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 ODF3L1-201ENST00000332145 1196 ntAPPRIS P1 TSL 1 (best) BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 PRELID3B-202ENST00000371033 943 ntTSL 2 BASIC14.86□□□□□ -0.03
RNF135Q8IUD6 HLA-DRB5-201ENST00000374975 1260 ntAPPRIS P1 BASIC14.86□□□□□ -0.03
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms