Protein–RNA interactions for Protein: Q86UP0

CDH24, Cadherin-24, humanhuman

Predictions only

Length 819 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH24Q86UP0 TPM2-202ENST00000360958 1189 ntAPPRIS P5 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH24Q86UP0 UBL4A-201ENST00000369653 711 ntTSL 3 BASIC13.03□□□□□ -0.32
CDH24Q86UP0 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
CDH24Q86UP0 APRT-201ENST00000378364 947 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH24Q86UP0 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH24Q86UP0 AC026316.1-201ENST00000398900 414 ntBASIC13.03□□□□□ -0.32
CDH24Q86UP0 DNAJB1P1-201ENST00000429417 1024 ntBASIC13.03□□□□□ -0.32
CDH24Q86UP0 AL109767.1-201ENST00000429450 564 ntTSL 4 BASIC13.03□□□□□ -0.32
CDH24Q86UP0 CR769775.1-201ENST00000443347 931 ntTSL 3 BASIC13.03□□□□□ -0.32
CDH24Q86UP0 HIST2H2BB-201ENST00000449108 381 ntBASIC13.03□□□□□ -0.32
CDH24Q86UP0 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.03□□□□□ -0.32
CDH24Q86UP0 AC093627.5-203ENST00000497320 746 ntTSL 2 BASIC13.03□□□□□ -0.32
CDH24Q86UP0 INO80C-210ENST00000590757 595 ntTSL 2 BASIC13.03□□□□□ -0.32
CDH24Q86UP0 OR10B1P-201ENST00000601666 907 ntBASIC13.03□□□□□ -0.32
CDH24Q86UP0 AC103691.2-201ENST00000618824 433 ntBASIC13.03□□□□□ -0.32
CDH24Q86UP0 AL805961.1-201ENST00000642026 753 ntBASIC13.03□□□□□ -0.32
CDH24Q86UP0 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CDH24Q86UP0 MYT1-201ENST00000328439 5535 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH24Q86UP0 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC13.03□□□□□ -0.32
CDH24Q86UP0 ERBB2-202ENST00000406381 4564 ntTSL 5 BASIC13.03□□□□□ -0.32
CDH24Q86UP0 ACRBP-201ENST00000229243 1933 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH24Q86UP0 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC13.03□□□□□ -0.32
CDH24Q86UP0 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH24Q86UP0 LHX6-210ENST00000559895 3587 ntTSL 2 BASIC13.03□□□□□ -0.32
CDH24Q86UP0 CR382287.2-201ENST00000623370 1942 ntTSL 2 BASIC13.03□□□□□ -0.32
CDH24Q86UP0 HACD2-201ENST00000383657 4257 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH24Q86UP0 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC13.03□□□□□ -0.32
CDH24Q86UP0 MAGEA2-209ENST00000623806 2025 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CDH24Q86UP0 AC011700.1-201ENST00000610409 2627 ntBASIC13.03□□□□□ -0.32
CDH24Q86UP0 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH24Q86UP0 SLC22A5-201ENST00000245407 3237 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH24Q86UP0 FAM32A-201ENST00000263384 1455 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH24Q86UP0 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH24Q86UP0 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
CDH24Q86UP0 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH24Q86UP0 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH24Q86UP0 CCDC88C-204ENST00000389857 7474 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
CDH24Q86UP0 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH24Q86UP0 RNF111-201ENST00000348370 5913 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
CDH24Q86UP0 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.02□□□□□ -0.32
CDH24Q86UP0 DNAJB12-201ENST00000338820 4360 ntTSL 2 BASIC13.02□□□□□ -0.32
CDH24Q86UP0 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
CDH24Q86UP0 ELN-211ENST00000414324 3139 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.32
CDH24Q86UP0 CASC2-202ENST00000426021 3232 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CDH24Q86UP0 ZNF785-201ENST00000395216 3282 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CDH24Q86UP0 AL391244.1-206ENST00000447725 1843 ntTSL 5 BASIC13.02□□□□□ -0.32
CDH24Q86UP0 VCAN-211ENST00000513984 1825 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CDH24Q86UP0 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CDH24Q86UP0 GATA2-201ENST00000341105 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
CDH24Q86UP0 TLX1NB-202ENST00000445873 1862 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CDH24Q86UP0 RAB11FIP1-206ENST00000524118 1959 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
CDH24Q86UP0 ZNF417-203ENST00000595559 1975 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
CDH24Q86UP0 NOP2-222ENST00000617555 2017 ntTSL 5 BASIC13.02□□□□□ -0.33
CDH24Q86UP0 MCHR1-201ENST00000249016 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDH24Q86UP0 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
CDH24Q86UP0 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDH24Q86UP0 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDH24Q86UP0 MBD3L5-201ENST00000329753 778 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDH24Q86UP0 PRTFDC1-203ENST00000376378 747 ntTSL 2 BASIC13.02□□□□□ -0.33
CDH24Q86UP0 ISY1-203ENST00000393295 3842 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDH24Q86UP0 MIR1227-201ENST00000408484 88 ntBASIC13.02□□□□□ -0.33
CDH24Q86UP0 LINC01006-202ENST00000418309 640 ntTSL 3 BASIC13.02□□□□□ -0.33
CDH24Q86UP0 AL450469.2-201ENST00000427132 499 ntTSL 3 BASIC13.02□□□□□ -0.33
CDH24Q86UP0 CEP164P1-201ENST00000455142 418 ntBASIC13.02□□□□□ -0.33
CDH24Q86UP0 RPL23A-206ENST00000496182 636 ntTSL 3 BASIC13.02□□□□□ -0.33
CDH24Q86UP0 AC113383.1-201ENST00000514696 582 ntTSL 4 BASIC13.02□□□□□ -0.33
CDH24Q86UP0 AC009041.1-201ENST00000565401 544 ntTSL 4 BASIC13.02□□□□□ -0.33
CDH24Q86UP0 CYB5D1-202ENST00000570446 570 ntTSL 4 BASIC13.02□□□□□ -0.33
CDH24Q86UP0 AC132192.2-201ENST00000596206 1147 ntBASIC13.02□□□□□ -0.33
CDH24Q86UP0 AC006453.1-201ENST00000636037 1257 ntBASIC13.02□□□□□ -0.33
CDH24Q86UP0 ARV1-201ENST00000310256 1335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDH24Q86UP0 AL360270.3-201ENST00000609118 1348 ntBASIC13.02□□□□□ -0.33
CDH24Q86UP0 LINC01725-203ENST00000417975 3177 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDH24Q86UP0 SHOX-202ENST00000381575 1351 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDH24Q86UP0 SH3PXD2B-203ENST00000519643 1394 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDH24Q86UP0 HNRNPLL-209ENST00000449105 4173 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDH24Q86UP0 TMEM170A-207ENST00000569540 2331 ntTSL 2 BASIC13.02□□□□□ -0.33
CDH24Q86UP0 CACNA1G-218ENST00000507510 7014 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDH24Q86UP0 CYP51A1P3-201ENST00000400072 1428 ntBASIC13.02□□□□□ -0.33
CDH24Q86UP0 KCNAB2-219ENST00000602612 2396 ntTSL 2 BASIC13.02□□□□□ -0.33
CDH24Q86UP0 ARGLU1-203ENST00000400198 3390 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDH24Q86UP0 TMEM230-201ENST00000202834 1472 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDH24Q86UP0 GNB2-202ENST00000393924 1524 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDH24Q86UP0 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDH24Q86UP0 NSUN5P1-204ENST00000428392 1562 ntTSL 2 BASIC13.02□□□□□ -0.33
CDH24Q86UP0 AC012349.1-201ENST00000518662 2643 ntTSL 2 BASIC13.02□□□□□ -0.33
CDH24Q86UP0 CTSD-211ENST00000637387 1597 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
CDH24Q86UP0 AC006262.1-203ENST00000598170 1634 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
CDH24Q86UP0 AL157791.1-201ENST00000553667 1699 ntBASIC13.02□□□□□ -0.33
CDH24Q86UP0 UNC5CL-201ENST00000244565 3136 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDH24Q86UP0 CXCL12-201ENST00000343575 1857 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDH24Q86UP0 CROT-201ENST00000331536 3175 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDH24Q86UP0 ARHGEF1-201ENST00000337665 3171 ntAPPRIS P4 TSL 1 (best) BASIC13.02□□□□□ -0.33
CDH24Q86UP0 KIAA1614-201ENST00000367587 3309 ntTSL 2 BASIC13.01□□□□□ -0.33
CDH24Q86UP0 SLC39A9-209ENST00000556605 2065 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
CDH24Q86UP0 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
CDH24Q86UP0 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDH24Q86UP0 A1BG-AS1-204ENST00000595302 2130 ntTSL 2 BASIC13.01□□□□□ -0.33
CDH24Q86UP0 PCGF2-202ENST00000611883 2179 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
CDH24Q86UP0 ARAP1-204ENST00000393609 5145 ntAPPRIS ALT2 TSL 2 BASIC13.01□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 88.7 ms