Protein–RNA interactions for Protein: Q643R3

LPCAT4, Lysophospholipid acyltransferase LPCAT4, humanhuman

Predictions only

Length 524 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT4Q643R3 AC110491.3-201ENST00000631985 460 ntTSL 2 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 DYSF-206ENST00000409744 6564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 DYSF-209ENST00000410041 6594 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 SLC26A6-203ENST00000358747 2729 ntTSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 EXOC7-213ENST00000467929 2260 ntTSL 2 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 PARP3-202ENST00000417220 2472 ntAPPRIS P3 TSL 5 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 RGL1-202ENST00000360851 4724 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 AQP7-205ENST00000379507 2879 ntAPPRIS ALT2 TSL 5 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 CCDC88A-214ENST00000621814 3089 ntTSL 5 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 SOX30-201ENST00000265007 3265 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 FAM95C-205ENST00000637556 2421 ntAPPRIS P5 TSL 2 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 PAX6-207ENST00000379129 2614 ntAPPRIS P4 TSL 5 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 APEH-201ENST00000296456 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 ZNF667-201ENST00000292069 3832 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 TSKU-203ENST00000527881 3554 ntAPPRIS P1 TSL 2 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 GOLGA6L7P-201ENST00000567390 2397 ntAPPRIS P1 TSL 5 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 CSTF2-201ENST00000372972 1958 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 PRR3-201ENST00000376557 1797 ntTSL 2 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 NCOR2-208ENST00000429285 8475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 APAF1-202ENST00000357310 7055 ntAPPRIS ALT1 TSL 5 BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 PLOD2-201ENST00000282903 3732 ntAPPRIS P4 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 HCN3-201ENST00000368358 3718 ntAPPRIS P1 TSL 1 (best) BASIC13.2□□□□□ -0.3
LPCAT4Q643R3 LDLR-207ENST00000558013 3144 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 ANP32E-210ENST00000629042 3054 ntTSL 5 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 MRPL44-201ENST00000258383 1748 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 CENPK-202ENST00000396679 1734 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 AMT-232ENST00000636199 1546 ntTSL 5 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 SEZ6-202ENST00000335960 4195 ntAPPRIS ALT2 TSL 5 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 RPS28-203ENST00000600659 1326 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 FGF23-201ENST00000237837 3018 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 PIGC-202ENST00000367728 2630 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 FRMD6-203ENST00000395718 4828 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 HPSE-201ENST00000311412 4615 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 WDR83-201ENST00000418543 1457 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 RBM15-201ENST00000369784 4244 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 RUBCN-202ENST00000296343 2919 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 HDAC8-203ENST00000373559 632 ntTSL 2 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 HDAC8-208ENST00000373583 434 ntTSL 5 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 NDUFC1-201ENST00000394223 598 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 KRT18P13-201ENST00000400056 1290 ntBASIC13.19□□□□□ -0.3
LPCAT4Q643R3 POM121L8P-201ENST00000417732 1281 ntBASIC13.19□□□□□ -0.3
LPCAT4Q643R3 UPF3AP3-201ENST00000420996 769 ntBASIC13.19□□□□□ -0.3
LPCAT4Q643R3 COX10-202ENST00000429152 875 ntTSL 2 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 CNN2P11-201ENST00000429351 262 ntBASIC13.19□□□□□ -0.3
LPCAT4Q643R3 PTPA-215ENST00000432124 567 ntTSL 4 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 POM121L9P-203ENST00000441984 1285 ntBASIC13.19□□□□□ -0.3
LPCAT4Q643R3 PIGZ-204ENST00000443835 675 ntTSL 4 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 AC063976.1-201ENST00000457890 381 ntTSL 2 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 AC068587.3-201ENST00000526613 355 ntBASIC13.19□□□□□ -0.3
LPCAT4Q643R3 IFITM1-204ENST00000528780 730 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 SCN4B-204ENST00000529878 566 ntTSL 4 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 MSRB3-206ENST00000535664 964 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 AL512310.5-201ENST00000551999 515 ntBASIC13.19□□□□□ -0.3
LPCAT4Q643R3 AC090607.3-202ENST00000558971 383 ntTSL 3 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 AC012645.3-203ENST00000567153 520 ntTSL 2 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 ARL16-202ENST00000570561 768 ntTSL 2 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 ANAPC11-216ENST00000579133 563 ntTSL 3 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 FBXL12-202ENST00000585379 956 ntTSL 2 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 AC099811.2-203ENST00000592574 958 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 AC027612.4-201ENST00000605371 583 ntBASIC13.19□□□□□ -0.3
LPCAT4Q643R3 WNT1-202ENST00000613114 1278 ntTSL 5 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 AP005019.2-201ENST00000615104 511 ntBASIC13.19□□□□□ -0.3
LPCAT4Q643R3 SPACA6P-AS-201ENST00000602324 3962 ntTSL 2 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 ANKRD36-204ENST00000461153 6102 ntAPPRIS P2 TSL 5 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 LINC00563-201ENST00000566370 1400 ntBASIC13.19□□□□□ -0.3
LPCAT4Q643R3 ZFYVE19-202ENST00000336455 1784 ntTSL 2 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 GRM8-201ENST00000339582 4057 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 AC009108.4-201ENST00000623284 2451 ntBASIC13.19□□□□□ -0.3
LPCAT4Q643R3 TMX4-201ENST00000246024 6169 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 SP7-202ENST00000536324 3151 ntAPPRIS P1 TSL 2 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 AP4M1-204ENST00000421755 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 PCSK7-215ENST00000540028 3332 ntTSL 2 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 POTEI-203ENST00000631234 2072 ntTSL 2 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 ING4-202ENST00000396807 1393 ntAPPRIS ALT1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 GAS6-AS1-201ENST00000458001 7169 ntTSL 5 BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 CHMP4C-201ENST00000297265 1866 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 SLC13A2-201ENST00000314669 2711 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
LPCAT4Q643R3 HAS3-202ENST00000306560 4220 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 PIWIL1-201ENST00000245255 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 AC009549.1-201ENST00000603468 1686 ntBASIC13.18□□□□□ -0.3
LPCAT4Q643R3 CLTCL1-210ENST00000617926 1695 ntTSL 2 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 SCN2B-201ENST00000278947 5826 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 ZNF529-209ENST00000591340 4331 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 LMX1B-204ENST00000561065 1300 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 C10orf76-202ENST00000370033 4119 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 GPSM3-209ENST00000487761 1460 ntTSL 5 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 EMBP1-203ENST00000622787 4235 ntTSL 2 BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 OPRK1-201ENST00000265572 5014 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 LRRC8A-203ENST00000372600 4355 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
LPCAT4Q643R3 AC008040.5-201ENST00000599781 1781 ntBASIC13.18□□□□□ -0.3
LPCAT4Q643R3 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms