Protein–RNA interactions for Protein: P68431

HIST1H3A, Histone H3.1, humanhuman

Predictions only

Length 136 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HIST1H3AP68431 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 PELP1-212ENST00000574876 3465 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 PPFIA4-204ENST00000447715 6349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 LAMP2-203ENST00000434600 2089 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 SFXN3-201ENST00000224807 3089 ntTSL 5 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 PPARG-205ENST00000397010 2017 ntAPPRIS ALT1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 ASAH1-258ENST00000637790 3042 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 ENO2-205ENST00000535366 2827 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 AC009542.1-201ENST00000412549 1810 ntTSL 2 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 WASHC1-201ENST00000442898 1827 ntAPPRIS P1 TSL 2 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 FAM122B-201ENST00000298090 2706 ntAPPRIS ALT2 TSL 2 BASIC12.23□□□□□ -0.45
HIST1H3AP68431 TFAM-204ENST00000487519 5414 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 NAA15-201ENST00000296543 6222 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
HIST1H3AP68431 ZNF275-201ENST00000370249 5920 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 ZIK1-201ENST00000307468 2510 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 DRD3-202ENST00000383673 1640 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 PNRC2-201ENST00000334351 2416 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 DSE-201ENST00000331677 7237 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 METTL17-221ENST00000556670 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 SALL2-205ENST00000611430 1466 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 CSF2RB-203ENST00000406230 2895 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 ANXA6-202ENST00000377751 1430 ntTSL 2 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 PRDM16-206ENST00000511072 4282 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 AC004623.1-201ENST00000624592 2127 ntBASIC12.22□□□□□ -0.45
HIST1H3AP68431 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 USP22-201ENST00000261497 5220 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 MYL12B-201ENST00000237500 1210 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 MIR645-201ENST00000385283 94 ntBASIC12.22□□□□□ -0.45
HIST1H3AP68431 ELK2AP-201ENST00000392510 1007 ntBASIC12.22□□□□□ -0.45
HIST1H3AP68431 MIR1247-201ENST00000408206 136 ntBASIC12.22□□□□□ -0.45
HIST1H3AP68431 AC073869.2-201ENST00000417338 1026 ntBASIC12.22□□□□□ -0.45
HIST1H3AP68431 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 DNAJB1P1-201ENST00000429417 1024 ntBASIC12.22□□□□□ -0.45
HIST1H3AP68431 LINC01352-201ENST00000431347 962 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 TEX36-AS1-202ENST00000446081 749 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 RPSAP15-201ENST00000448168 861 ntBASIC12.22□□□□□ -0.45
HIST1H3AP68431 AC007279.1-201ENST00000448547 837 ntBASIC12.22□□□□□ -0.45
HIST1H3AP68431 AKR7A2P1-201ENST00000460134 915 ntBASIC12.22□□□□□ -0.45
HIST1H3AP68431 AL713999.1-201ENST00000473363 753 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 AC092658.1-201ENST00000505836 891 ntBASIC12.22□□□□□ -0.45
HIST1H3AP68431 AC114947.1-202ENST00000514136 344 ntBASIC12.22□□□□□ -0.45
HIST1H3AP68431 AC104561.3-201ENST00000518590 715 ntTSL 5 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 HOXA10-AS-202ENST00000519935 1161 ntTSL 3 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 SERGEF-208ENST00000528200 1264 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 AC239802.2-201ENST00000532137 554 ntTSL 4 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 LINC02417-201ENST00000542449 515 ntTSL 2 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 CYB561A3-219ENST00000544118 1136 ntTSL 5 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 REC114-202ENST00000560581 833 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 PPCDC-205ENST00000563393 1149 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 PPCDC-208ENST00000567336 892 ntTSL 5 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 AC063977.3-201ENST00000597569 547 ntTSL 4 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 AC243960.2-201ENST00000600996 747 ntBASIC12.22□□□□□ -0.45
HIST1H3AP68431 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 RGMA-204ENST00000543599 3174 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 BORCS5-202ENST00000314565 4840 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 ITPR2-202ENST00000381340 11405 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 SLC6A5-202ENST00000525748 7084 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 RLIM-202ENST00000349225 3478 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 AL445250.1-201ENST00000641671 2259 ntBASIC12.22□□□□□ -0.45
HIST1H3AP68431 CARHSP1-216ENST00000610831 2841 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 B3GNT5-202ENST00000460419 3368 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 DCUN1D4-201ENST00000334635 4312 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 MYADM-203ENST00000391769 3186 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 NRADDP-202ENST00000641269 1585 ntBASIC12.22□□□□□ -0.45
HIST1H3AP68431 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 FGFR3-201ENST00000260795 4132 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
HIST1H3AP68431 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC12.22□□□□□ -0.45
HIST1H3AP68431 OARD1-203ENST00000463088 1515 ntAPPRIS P1 TSL 2 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 KLKP1-203ENST00000600104 1532 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 SLC27A4-201ENST00000300456 3028 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 ZNF747-202ENST00000395094 3504 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 MEFV-201ENST00000219596 3499 ntAPPRIS P2 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 ARHGEF17-201ENST00000263674 7853 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 LINC01205-202ENST00000497996 1493 ntTSL 2 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 SHPK-201ENST00000225519 3838 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 ARRB1-202ENST00000420843 3336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 AC027612.1-201ENST00000445234 2395 ntBASIC12.21□□□□□ -0.45
HIST1H3AP68431 FAM98A-201ENST00000238823 2816 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
HIST1H3AP68431 AC114271.1-201ENST00000612689 2813 ntBASIC12.21□□□□□ -0.45
HIST1H3AP68431 ARHGAP45-202ENST00000539243 4184 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
HIST1H3AP68431 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 53.9 ms