Protein–RNA interactions for Protein: P57055

RIPPLY3, Protein ripply3, humanhuman

Predictions only

Length 190 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPPLY3P57055 AC106047.1-202ENST00000467484 482 ntTSL 2 BASIC11.73□□□□□ -0.53
RIPPLY3P57055 RPS23-207ENST00000511844 530 ntTSL 2 BASIC11.73□□□□□ -0.53
RIPPLY3P57055 FAM153B-220ENST00000515817 1966 ntAPPRIS P2 TSL 5 BASIC11.73□□□□□ -0.53
RIPPLY3P57055 AP003040.1-201ENST00000532044 1024 ntBASIC11.73□□□□□ -0.53
RIPPLY3P57055 GABARAPL1-203ENST00000535576 792 ntTSL 5 BASIC11.73□□□□□ -0.53
RIPPLY3P57055 LHX6-207ENST00000541397 2942 ntTSL 2 BASIC11.73□□□□□ -0.53
RIPPLY3P57055 AL445363.2-201ENST00000554608 837 ntTSL 2 BASIC11.73□□□□□ -0.53
RIPPLY3P57055 GRAMD4P6-201ENST00000556999 244 ntBASIC11.73□□□□□ -0.53
RIPPLY3P57055 AC005777.1-201ENST00000588332 187 ntBASIC11.73□□□□□ -0.53
RIPPLY3P57055 MIR663AHG-218ENST00000598448 804 ntTSL 5 BASIC11.73□□□□□ -0.53
RIPPLY3P57055 PDLIM1P1-201ENST00000604187 969 ntBASIC11.73□□□□□ -0.53
RIPPLY3P57055 AC005746.3-201ENST00000614751 393 ntBASIC11.73□□□□□ -0.53
RIPPLY3P57055 AL445363.1-201ENST00000623749 952 ntTSL 2 BASIC11.73□□□□□ -0.53
RIPPLY3P57055 HELLS-212ENST00000630929 400 ntTSL 5 BASIC11.73□□□□□ -0.53
RIPPLY3P57055 CTSD-208ENST00000636843 1512 ntAPPRIS ALT2 TSL 5 BASIC11.73□□□□□ -0.53
RIPPLY3P57055 COL22A1-201ENST00000303045 6346 ntAPPRIS P2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RIPPLY3P57055 KIAA1217-203ENST00000376452 6052 ntAPPRIS ALT2 TSL 1 (best) BASIC11.73□□□□□ -0.53
RIPPLY3P57055 MPPED2-202ENST00000448418 5591 ntTSL 1 (best) BASIC11.73□□□□□ -0.53
RIPPLY3P57055 RPS6KC1-201ENST00000366959 5454 ntAPPRIS ALT1 TSL 2 BASIC11.73□□□□□ -0.53
RIPPLY3P57055 RPS6KC1-202ENST00000366960 5490 ntAPPRIS P3 TSL 1 (best) BASIC11.73□□□□□ -0.53
RIPPLY3P57055 LINC00174-204ENST00000421767 4702 ntTSL 5 BASIC11.73□□□□□ -0.53
RIPPLY3P57055 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC11.73□□□□□ -0.53
RIPPLY3P57055 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RIPPLY3P57055 DSTN-201ENST00000246069 3617 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RIPPLY3P57055 USH1G-202ENST00000614341 3558 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RIPPLY3P57055 JAKMIP3-201ENST00000298622 6626 ntAPPRIS P1 TSL 5 BASIC11.73□□□□□ -0.53
RIPPLY3P57055 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC11.73□□□□□ -0.53
RIPPLY3P57055 XPOT-201ENST00000332707 6414 ntAPPRIS P1 TSL 2 BASIC11.73□□□□□ -0.53
RIPPLY3P57055 CDH20-203ENST00000538374 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.73□□□□□ -0.53
RIPPLY3P57055 GALC-206ENST00000544807 2528 ntTSL 2 BASIC11.73□□□□□ -0.53
RIPPLY3P57055 TCP1-201ENST00000321394 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 PRPF8-205ENST00000572621 7445 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 GFOD1-206ENST00000612338 2481 ntTSL 2 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 ACTR10-201ENST00000254286 2419 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 SNX14-215ENST00000513865 2259 ntTSL 5 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 CYP4F3-202ENST00000585846 2056 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 HTR1B-201ENST00000369947 2021 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 CASKIN2-202ENST00000433559 3950 ntTSL 2 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 A1CF-202ENST00000373993 1997 ntAPPRIS P4 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 DUS2-202ENST00000432752 1864 ntTSL 2 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 LINC00391-201ENST00000433569 1844 ntTSL 5 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 HECTD3-202ENST00000372172 3610 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 SHROOM1-208ENST00000617339 3638 ntAPPRIS ALT2 TSL 5 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 KIF21B-204ENST00000461742 5428 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 MAGEA12-202ENST00000393869 1761 ntAPPRIS P1 TSL 2 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 PABPC1-201ENST00000318607 3485 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 ZDHHC6-201ENST00000369404 1721 ntAPPRIS ALT1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 POLD3-208ENST00000532497 1700 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 KRT27-201ENST00000301656 1612 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 HYOU1-218ENST00000614668 1569 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 IL12A-201ENST00000305579 1522 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 SLC26A11-201ENST00000361193 2885 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 ZNRF4-201ENST00000222033 1426 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 SELENOS-201ENST00000398226 1439 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 SERPINE3-203ENST00000521255 1439 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 CAPN1-224ENST00000533129 2792 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 OAS3-201ENST00000228928 6719 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 RUFY2-204ENST00000399200 2685 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 CD27-201ENST00000266557 1338 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 TUBA3GP-201ENST00000410028 1325 ntBASIC11.72□□□□□ -0.53
RIPPLY3P57055 MGRN1-203ENST00000415496 6405 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 MCM9-202ENST00000316316 5101 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 JTB-202ENST00000356648 1040 ntTSL 2 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 Metazoa_SRP.6-201ENST00000366384 298 ntBASIC11.72□□□□□ -0.53
RIPPLY3P57055 HDGF-202ENST00000368206 960 ntTSL 5 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 MAPK13-202ENST00000373759 1036 ntTSL 5 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 AL359649.1-202ENST00000375713 443 ntTSL 5 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 Metazoa_SRP.8-201ENST00000398067 251 ntBASIC11.72□□□□□ -0.53
RIPPLY3P57055 CCDC153-202ENST00000415318 1173 ntAPPRIS P1 TSL 5 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 AP000244.1-201ENST00000424582 201 ntBASIC11.72□□□□□ -0.53
RIPPLY3P57055 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 PFN2-205ENST00000461868 613 ntTSL 2 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 MUTYH-231ENST00000488731 740 ntTSL 5 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 CACNA1C-AS1-203ENST00000544517 742 ntTSL 4 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 BCAR1P1-201ENST00000553953 636 ntBASIC11.72□□□□□ -0.53
RIPPLY3P57055 SMAD7-208ENST00000591805 1152 ntTSL 2 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 MIR6165-201ENST00000614803 84 ntBASIC11.72□□□□□ -0.53
RIPPLY3P57055 AC134878.2-201ENST00000620700 1265 ntBASIC11.72□□□□□ -0.53
RIPPLY3P57055 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 ARHGEF26-203ENST00000465817 2353 ntTSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 PPT1-215ENST00000641471 2368 ntBASIC11.72□□□□□ -0.53
RIPPLY3P57055 TRIM10-204ENST00000449742 3546 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 LRRFIP1P1-201ENST00000498774 2246 ntBASIC11.72□□□□□ -0.53
RIPPLY3P57055 AC023157.3-201ENST00000619086 2088 ntBASIC11.72□□□□□ -0.53
RIPPLY3P57055 DNM2-204ENST00000408974 3013 ntAPPRIS ALT1 TSL 2 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 RGMA-203ENST00000542321 3038 ntAPPRIS ALT2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 ARID4B-201ENST00000264183 4995 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 MTMR9-202ENST00000526292 1960 ntTSL 2 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 PXDNL-201ENST00000356297 4805 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 COX10-AS1-202ENST00000449363 1944 ntTSL 2 BASIC11.72□□□□□ -0.53
RIPPLY3P57055 TLE6-202ENST00000452088 1883 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 AMOTL2-201ENST00000249883 4488 ntAPPRIS P3 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 SBF1-202ENST00000380817 8008 ntAPPRIS P2 TSL 1 (best) BASIC11.72□□□□□ -0.53
RIPPLY3P57055 SNRPD3-201ENST00000215829 1763 ntAPPRIS P1 TSL 1 (best) BASIC11.72□□□□□ -0.53
Retrieved 100 of 98,524 protein–RNA pairs in 41.8 ms