Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 ASPH-214ENST00000519234 2874 ntTSL 5 BASIC12.48□□□□□ -0.41
GFRA1P56159 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 AC089987.1-201ENST00000551654 2209 ntBASIC12.47□□□□□ -0.41
GFRA1P56159 SP8-203ENST00000617581 3496 ntAPPRIS ALT2 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC12.47□□□□□ -0.41
GFRA1P56159 CLEC16A-202ENST00000409552 3365 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 MARK3-205ENST00000429436 3371 ntAPPRIS ALT1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 KATNBL1-201ENST00000256544 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 PAX8-AS1-204ENST00000436293 2687 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 ATP6V0A1-206ENST00000585525 2679 ntTSL 2 BASIC12.47□□□□□ -0.41
GFRA1P56159 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 PRPH-201ENST00000257860 3245 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 MED15-204ENST00000406969 3210 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 AC079781.5-202ENST00000641784 3743 ntBASIC12.47□□□□□ -0.41
GFRA1P56159 TRMT1-217ENST00000592062 2579 ntAPPRIS P3 TSL 5 BASIC12.47□□□□□ -0.41
GFRA1P56159 NIPA1-201ENST00000337435 6567 ntAPPRIS P4 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 HTR3E-205ENST00000436361 1371 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 SLC25A3-216ENST00000551917 1359 ntAPPRIS P4 TSL 2 BASIC12.47□□□□□ -0.41
GFRA1P56159 ASGR1-209ENST00000619926 1384 ntTSL 5 BASIC12.47□□□□□ -0.41
GFRA1P56159 DENND1B-211ENST00000620048 8378 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
GFRA1P56159 ENDOV-207ENST00000518907 2418 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 TCOF1-202ENST00000377797 5095 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
GFRA1P56159 SLC13A5-203ENST00000433363 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 COL9A2-202ENST00000372748 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 GLB1L2-205ENST00000535456 3365 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 FBXL4-201ENST00000229971 2810 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 SSR4-202ENST00000370085 526 ntTSL 2 BASIC12.47□□□□□ -0.41
GFRA1P56159 CD300LG-203ENST00000377203 1060 ntAPPRIS ALT2 TSL 2 BASIC12.47□□□□□ -0.41
GFRA1P56159 AL357563.1-201ENST00000404728 395 ntBASIC12.47□□□□□ -0.41
GFRA1P56159 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC12.47□□□□□ -0.41
GFRA1P56159 AC006329.1-201ENST00000419422 705 ntTSL 2 BASIC12.47□□□□□ -0.41
GFRA1P56159 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC12.47□□□□□ -0.41
GFRA1P56159 AC012362.1-201ENST00000434906 739 ntBASIC12.47□□□□□ -0.41
GFRA1P56159 ZMIZ1-AS1-202ENST00000440151 814 ntTSL 3 BASIC12.47□□□□□ -0.41
GFRA1P56159 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC12.47□□□□□ -0.41
GFRA1P56159 AC006455.8-201ENST00000451381 351 ntTSL 3 BASIC12.47□□□□□ -0.41
GFRA1P56159 OSMR-AS1-202ENST00000512519 837 ntTSL 2 BASIC12.47□□□□□ -0.41
GFRA1P56159 AL355916.2-201ENST00000556543 593 ntTSL 4 BASIC12.47□□□□□ -0.41
GFRA1P56159 EIF3F-209ENST00000640290 372 ntTSL 5 BASIC12.47□□□□□ -0.41
GFRA1P56159 MIR3936HG-204ENST00000621103 1793 ntTSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 DAXX-201ENST00000266000 2606 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 GPAT2-202ENST00000434632 3061 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
GFRA1P56159 CDK5RAP1-202ENST00000346416 2122 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 LAT2-205ENST00000460943 2527 ntAPPRIS P2 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 SEZ6-203ENST00000360295 4306 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
GFRA1P56159 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 GAS2L1-209ENST00000618518 3382 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
GFRA1P56159 STX1B-201ENST00000215095 4697 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 SIDT1-201ENST00000264852 5080 ntAPPRIS P1 TSL 2 BASIC12.47□□□□□ -0.41
GFRA1P56159 CLCN7-201ENST00000262318 3717 ntTSL 5 BASIC12.47□□□□□ -0.41
GFRA1P56159 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 SIGLECL1-208ENST00000614422 1516 ntAPPRIS P3 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 XRCC1-201ENST00000262887 2802 ntAPPRIS P1 TSL 1 (best) BASIC12.47□□□□□ -0.41
GFRA1P56159 PDZD7-206ENST00000619208 4135 ntAPPRIS P1 TSL 5 BASIC12.47□□□□□ -0.41
GFRA1P56159 TCN2-202ENST00000405742 1936 ntAPPRIS ALT2 TSL 5 BASIC12.47□□□□□ -0.41
GFRA1P56159 ZEB2-225ENST00000558170 4012 ntAPPRIS P2 TSL 1 (best) BASIC12.46□□□□□ -0.41
GFRA1P56159 HNRNPH3-201ENST00000265866 2339 ntAPPRIS P4 TSL 1 (best) BASIC12.46□□□□□ -0.41
GFRA1P56159 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC12.46□□□□□ -0.41
GFRA1P56159 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.46□□□□□ -0.41
GFRA1P56159 TRAF3-202ENST00000351691 2239 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GFRA1P56159 NKX2-1-AS1-201ENST00000521292 1775 ntTSL 2 BASIC12.46□□□□□ -0.41
GFRA1P56159 Z98885.3-201ENST00000624882 1757 ntBASIC12.46□□□□□ -0.41
GFRA1P56159 AKAP12-204ENST00000402676 8432 ntAPPRIS P4 TSL 5 BASIC12.46□□□□□ -0.41
GFRA1P56159 GLIPR1L2-201ENST00000320460 1729 ntAPPRIS P3 TSL 1 (best) BASIC12.46□□□□□ -0.41
GFRA1P56159 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GFRA1P56159 IL6R-201ENST00000344086 3217 ntAPPRIS ALT2 TSL 1 (best) BASIC12.46□□□□□ -0.41
GFRA1P56159 AC040160.2-201ENST00000623816 1675 ntBASIC12.46□□□□□ -0.41
GFRA1P56159 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GFRA1P56159 RNF214-201ENST00000300650 2755 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GFRA1P56159 DIS3L2-205ENST00000409401 2048 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GFRA1P56159 CRYGC-201ENST00000282141 629 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GFRA1P56159 APOA1-202ENST00000359492 932 ntAPPRIS P1 TSL 2 BASIC12.46□□□□□ -0.41
GFRA1P56159 OR7E115P-201ENST00000382617 1024 ntBASIC12.46□□□□□ -0.41
GFRA1P56159 PPM1N-201ENST00000396735 895 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GFRA1P56159 INS-IGF2-202ENST00000397270 828 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GFRA1P56159 AC007952.2-201ENST00000399091 1176 ntTSL 1 (best) BASIC12.46□□□□□ -0.41
GFRA1P56159 AL390778.2-201ENST00000420883 886 ntTSL 3 BASIC12.46□□□□□ -0.41
GFRA1P56159 GRAMD1A-203ENST00000424536 808 ntTSL 2 BASIC12.46□□□□□ -0.41
GFRA1P56159 LDHBP1-201ENST00000455730 1119 ntBASIC12.46□□□□□ -0.41
GFRA1P56159 PPM1N-208ENST00000456399 618 ntTSL 3 BASIC12.46□□□□□ -0.41
GFRA1P56159 RMDN1-218ENST00000523911 950 ntTSL 2 BASIC12.46□□□□□ -0.41
GFRA1P56159 LINC02285-201ENST00000557121 943 ntTSL 2 BASIC12.46□□□□□ -0.41
GFRA1P56159 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC12.46□□□□□ -0.41
GFRA1P56159 AC090617.4-201ENST00000572404 422 ntTSL 3 BASIC12.46□□□□□ -0.41
GFRA1P56159 AP005901.3-201ENST00000581666 415 ntTSL 3 BASIC12.46□□□□□ -0.41
GFRA1P56159 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GFRA1P56159 PRMT5-AS1-206ENST00000599580 847 ntTSL 5 BASIC12.46□□□□□ -0.41
GFRA1P56159 SFMBT1-201ENST00000394752 4548 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GFRA1P56159 MORN4-201ENST00000307450 2315 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.41
GFRA1P56159 AL122018.1-201ENST00000446607 2310 ntBASIC12.46□□□□□ -0.41
GFRA1P56159 IL21R-AS1-201ENST00000563191 2615 ntTSL 2 BASIC12.46□□□□□ -0.42
GFRA1P56159 GDAP1L1-208ENST00000617075 2645 ntTSL 5 BASIC12.46□□□□□ -0.42
GFRA1P56159 CUEDC1-206ENST00000577830 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
GFRA1P56159 ZNF362-201ENST00000373428 2936 ntAPPRIS P1 TSL 1 (best) BASIC12.46□□□□□ -0.42
Retrieved 100 of 98,524 protein–RNA pairs in 46.2 ms