Protein–RNA interactions for Protein: P46098

HTR3A, 5-hydroxytryptamine receptor 3A, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HTR3AP46098 NUP54-201ENST00000264883 2367 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 AC107375.1-201ENST00000564464 2231 ntBASIC13□□□□□ -0.33
HTR3AP46098 KIF12-201ENST00000374118 2001 ntTSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 PPT1-205ENST00000449045 1957 ntTSL 2 BASIC13□□□□□ -0.33
HTR3AP46098 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 TMEM45A-202ENST00000403410 1910 ntTSL 5 BASIC13□□□□□ -0.33
HTR3AP46098 GRHL1-202ENST00000405379 1881 ntTSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 ABI2-215ENST00000430418 1676 ntTSL 5 BASIC13□□□□□ -0.33
HTR3AP46098 TMEM87A-201ENST00000307216 1598 ntTSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 EHF-212ENST00000533754 1501 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 ZYG11A-201ENST00000371528 4469 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HTR3AP46098 BORCS8-202ENST00000462790 1429 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 PLSCR1-214ENST00000487389 1443 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
HTR3AP46098 SHMT1P1-201ENST00000419974 1312 ntBASIC13□□□□□ -0.33
HTR3AP46098 EMC4-201ENST00000249209 852 ntTSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC13□□□□□ -0.33
HTR3AP46098 CSH2-202ENST00000345366 598 ntTSL 5 BASIC13□□□□□ -0.33
HTR3AP46098 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13□□□□□ -0.33
HTR3AP46098 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC13□□□□□ -0.33
HTR3AP46098 NPPA-201ENST00000376476 728 ntTSL 3 BASIC13□□□□□ -0.33
HTR3AP46098 GNRH2-204ENST00000380347 758 ntAPPRIS ALT2 TSL 5 BASIC13□□□□□ -0.33
HTR3AP46098 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 ZNF564-202ENST00000416136 255 ntTSL 3 BASIC13□□□□□ -0.33
HTR3AP46098 AC092580.1-201ENST00000433998 658 ntBASIC13□□□□□ -0.33
HTR3AP46098 THRB-AS1-202ENST00000438096 702 ntTSL 3 BASIC13□□□□□ -0.33
HTR3AP46098 AK2P2-201ENST00000439142 405 ntBASIC13□□□□□ -0.33
HTR3AP46098 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 DICER1-AS1-202ENST00000439819 810 ntTSL 3 BASIC13□□□□□ -0.33
HTR3AP46098 AL160290.2-201ENST00000448347 831 ntTSL 3 BASIC13□□□□□ -0.33
HTR3AP46098 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC13□□□□□ -0.33
HTR3AP46098 GSTZ1-219ENST00000557639 873 ntTSL 2 BASIC13□□□□□ -0.33
HTR3AP46098 CSH2-206ENST00000560142 749 ntTSL 5 BASIC13□□□□□ -0.33
HTR3AP46098 AC105020.3-201ENST00000566036 560 ntTSL 4 BASIC13□□□□□ -0.33
HTR3AP46098 CRISPLD2-210ENST00000569090 808 ntTSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 MIR3188-201ENST00000583494 85 ntBASIC13□□□□□ -0.33
HTR3AP46098 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC13□□□□□ -0.33
HTR3AP46098 NKG7-204ENST00000595217 816 ntTSL 2 BASIC13□□□□□ -0.33
HTR3AP46098 AL022328.3-201ENST00000607943 679 ntBASIC13□□□□□ -0.33
HTR3AP46098 FDPS-221ENST00000612683 1198 ntAPPRIS ALT1 TSL 5 BASIC13□□□□□ -0.33
HTR3AP46098 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC13□□□□□ -0.33
HTR3AP46098 ABBA01031663.1-201ENST00000635630 790 ntBASIC13□□□□□ -0.33
HTR3AP46098 AL033527.4-201ENST00000641026 673 ntBASIC13□□□□□ -0.33
HTR3AP46098 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 SERBP1-204ENST00000370995 3482 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 ELN-222ENST00000458204 3147 ntAPPRIS ALT2 TSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 MTG2-201ENST00000370823 2929 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HTR3AP46098 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC13□□□□□ -0.33
HTR3AP46098 MYBBP1A-201ENST00000254718 4807 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 SLC4A7-211ENST00000445684 4061 ntTSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 LINC01301-202ENST00000506428 2444 ntTSL 2 BASIC13□□□□□ -0.33
HTR3AP46098 SMAGP-203ENST00000603798 2350 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 RIMS1-218ENST00000522291 3876 ntTSL 5 BASIC13□□□□□ -0.33
HTR3AP46098 SLC7A7-201ENST00000285850 2263 ntAPPRIS P1 TSL 5 BASIC13□□□□□ -0.33
HTR3AP46098 SLC6A12-207ENST00000536824 2101 ntAPPRIS P1 TSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13□□□□□ -0.33
HTR3AP46098 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC13□□□□□ -0.33
HTR3AP46098 DNAJB13-201ENST00000339764 1875 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HTR3AP46098 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC12.99□□□□□ -0.33
HTR3AP46098 AC021683.1-201ENST00000585798 1767 ntTSL 5 BASIC12.99□□□□□ -0.33
HTR3AP46098 CIART-201ENST00000290363 1746 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HTR3AP46098 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC12.99□□□□□ -0.33
HTR3AP46098 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HTR3AP46098 SYNPR-209ENST00000478300 2709 ntAPPRIS P4 TSL 1 (best) BASIC12.99□□□□□ -0.33
HTR3AP46098 FAM213A-203ENST00000372187 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HTR3AP46098 SNRPN-203ENST00000400097 1605 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HTR3AP46098 C1S-202ENST00000360817 2635 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HTR3AP46098 CPEB4-208ENST00000520867 2607 ntTSL 1 (best) BASIC12.99□□□□□ -0.33
HTR3AP46098 AP002353.1-201ENST00000528257 1599 ntBASIC12.99□□□□□ -0.33
HTR3AP46098 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HTR3AP46098 LACTB2-201ENST00000276590 1508 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HTR3AP46098 ADPRH-205ENST00000478927 1501 ntAPPRIS P1 TSL 2 BASIC12.99□□□□□ -0.33
HTR3AP46098 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.99□□□□□ -0.33
HTR3AP46098 RAN-210ENST00000541630 1475 ntTSL 2 BASIC12.99□□□□□ -0.33
HTR3AP46098 RMND1-205ENST00000622845 1484 ntTSL 5 BASIC12.99□□□□□ -0.33
HTR3AP46098 HRC-201ENST00000252825 2385 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HTR3AP46098 POLR3K-201ENST00000293860 1392 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HTR3AP46098 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.99□□□□□ -0.33
HTR3AP46098 TMEM40-201ENST00000264728 984 ntAPPRIS P3 TSL 2 BASIC12.99□□□□□ -0.33
HTR3AP46098 LSM10-201ENST00000315732 850 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HTR3AP46098 LINC00116-202ENST00000426713 461 ntAPPRIS ALT2 TSL 3 BASIC12.99□□□□□ -0.33
HTR3AP46098 OGFR-AS1-201ENST00000431361 668 ntTSL 2 BASIC12.99□□□□□ -0.33
HTR3AP46098 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC12.99□□□□□ -0.33
HTR3AP46098 AP001007.1-201ENST00000526796 645 ntTSL 2 BASIC12.99□□□□□ -0.33
HTR3AP46098 CFL1-212ENST00000531413 636 ntTSL 3 BASIC12.99□□□□□ -0.33
HTR3AP46098 AL132639.2-202ENST00000553520 467 ntTSL 2 BASIC12.99□□□□□ -0.33
HTR3AP46098 ATP6V1D-206ENST00000554236 888 ntTSL 5 BASIC12.99□□□□□ -0.33
HTR3AP46098 ADH5-213ENST00000626055 1299 ntTSL 5 BASIC12.99□□□□□ -0.33
HTR3AP46098 AC114737.3-201ENST00000636708 570 ntTSL 4 BASIC12.99□□□□□ -0.33
HTR3AP46098 CCDC13-201ENST00000310232 2943 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HTR3AP46098 SGMS1-202ENST00000361781 3744 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HTR3AP46098 KCNMA1-291ENST00000640834 3664 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
HTR3AP46098 FAM86C1-201ENST00000346333 2010 ntAPPRIS P3 TSL 1 (best) BASIC12.99□□□□□ -0.33
HTR3AP46098 SLC35B2-206ENST00000615337 2014 ntTSL 4 BASIC12.99□□□□□ -0.33
HTR3AP46098 ADAMTS13-202ENST00000356589 4349 ntAPPRIS ALT2 TSL 1 (best) BASIC12.99□□□□□ -0.33
HTR3AP46098 PARP1-203ENST00000366794 3958 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HTR3AP46098 GDPD5-209ENST00000529721 3222 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HTR3AP46098 AC025594.2-201ENST00000609480 3902 ntAPPRIS P1 TSL 3 BASIC12.99□□□□□ -0.33
HTR3AP46098 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
HTR3AP46098 DAXX-213ENST00000620164 2462 ntAPPRIS ALT2 TSL 5 BASIC12.99□□□□□ -0.33
HTR3AP46098 TMEM100-201ENST00000424486 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.99□□□□□ -0.33
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms