Protein–RNA interactions for Protein: P41229

KDM5C, Lysine-specific demethylase 5C, humanhuman

Predictions only

Length 1,560 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDM5CP41229 SYT4-205ENST00000590752 1765 ntTSL 2 BASIC20.18■□□□□ 0.82
KDM5CP41229 CD9-212ENST00000610354 1315 ntTSL 5 BASIC20.18■□□□□ 0.82
KDM5CP41229 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC20.18■□□□□ 0.82
KDM5CP41229 MYH14-208ENST00000598205 6137 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
KDM5CP41229 IL2RG-203ENST00000374202 1534 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KDM5CP41229 GBAP1-208ENST00000566701 1546 ntBASIC20.18■□□□□ 0.82
KDM5CP41229 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KDM5CP41229 LYG2-201ENST00000333017 862 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
KDM5CP41229 NPPB-201ENST00000376468 694 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KDM5CP41229 SNORA50C-201ENST00000408535 133 ntBASIC20.18■□□□□ 0.82
KDM5CP41229 AL357833.1-201ENST00000413993 832 ntTSL 3 BASIC20.18■□□□□ 0.82
KDM5CP41229 AL359458.1-201ENST00000430821 400 ntTSL 3 BASIC20.18■□□□□ 0.82
KDM5CP41229 AL357558.2-201ENST00000431915 425 ntTSL 2 BASIC20.18■□□□□ 0.82
KDM5CP41229 HNRNPA1P73-201ENST00000446472 928 ntBASIC20.18■□□□□ 0.82
KDM5CP41229 AACSP1-202ENST00000521412 1095 ntBASIC20.18■□□□□ 0.82
KDM5CP41229 IGHVII-33-1-201ENST00000524010 280 ntBASIC20.18■□□□□ 0.82
KDM5CP41229 DDIAS-204ENST00000525388 961 ntAPPRIS ALT2 TSL 2 BASIC20.18■□□□□ 0.82
KDM5CP41229 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC20.18■□□□□ 0.82
KDM5CP41229 AL136298.3-201ENST00000556746 445 ntBASIC20.18■□□□□ 0.82
KDM5CP41229 AC104759.1-201ENST00000559109 939 ntBASIC20.18■□□□□ 0.82
KDM5CP41229 AC091691.1-201ENST00000583587 1018 ntBASIC20.18■□□□□ 0.82
KDM5CP41229 MXRA7-204ENST00000585519 540 ntAPPRIS ALT2 TSL 5 BASIC20.18■□□□□ 0.82
KDM5CP41229 PDZRN3-AS1-203ENST00000608743 780 ntTSL 5 BASIC20.18■□□□□ 0.82
KDM5CP41229 SNORA50.1-201ENST00000628590 135 ntBASIC20.18■□□□□ 0.82
KDM5CP41229 ENC1-207ENST00000618628 5657 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
KDM5CP41229 SEMA3C-201ENST00000265361 5174 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KDM5CP41229 WSCD1-202ENST00000539421 2665 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
KDM5CP41229 TP73-207ENST00000378290 1831 ntTSL 2 BASIC20.18■□□□□ 0.82
KDM5CP41229 IL9R-202ENST00000369423 2032 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
KDM5CP41229 GREM1-202ENST00000560830 2648 ntTSL 2 BASIC20.18■□□□□ 0.82
KDM5CP41229 ZNF212-201ENST00000335870 2810 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KDM5CP41229 POMT1-204ENST00000402686 3038 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KDM5CP41229 NINL-201ENST00000278886 4969 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
KDM5CP41229 FAM238C-202ENST00000639963 1787 ntTSL 2 BASIC20.18■□□□□ 0.82
KDM5CP41229 FAM27E3-201ENST00000418795 1593 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
KDM5CP41229 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC20.18■□□□□ 0.82
KDM5CP41229 AATK-201ENST00000326724 5257 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
KDM5CP41229 GOLGA8IP-202ENST00000611635 2100 ntBASIC20.18■□□□□ 0.82
KDM5CP41229 TMCO3-202ENST00000434316 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KDM5CP41229 SLC1A7-206ENST00000620347 2873 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
KDM5CP41229 HARS2-201ENST00000230771 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KDM5CP41229 FGFR3-204ENST00000412135 3951 ntTSL 5 BASIC20.18■□□□□ 0.82
KDM5CP41229 NR1D2-201ENST00000312521 5258 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
KDM5CP41229 ECE1-201ENST00000264205 2381 ntAPPRIS P4 TSL 1 (best) BASIC20.17■□□□□ 0.82
KDM5CP41229 MCHR2-201ENST00000281806 2368 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
KDM5CP41229 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
KDM5CP41229 AC064853.1-201ENST00000413096 540 ntTSL 4 BASIC20.17■□□□□ 0.82
KDM5CP41229 GAPDHP29-201ENST00000429913 985 ntBASIC20.17■□□□□ 0.82
KDM5CP41229 LINC01823-204ENST00000438722 794 ntTSL 3 BASIC20.17■□□□□ 0.82
KDM5CP41229 AL583804.1-201ENST00000448643 810 ntTSL 3 BASIC20.17■□□□□ 0.82
KDM5CP41229 JPT1-205ENST00000470924 663 ntTSL 5 BASIC20.17■□□□□ 0.82
KDM5CP41229 PTPN20-229ENST00000513756 640 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KDM5CP41229 HAX1-211ENST00000532105 771 ntTSL 3 BASIC20.17■□□□□ 0.82
KDM5CP41229 NEMF-210ENST00000556672 590 ntTSL 2 BASIC20.17■□□□□ 0.82
KDM5CP41229 MIR4526-201ENST00000583168 87 ntBASIC20.17■□□□□ 0.82
KDM5CP41229 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
KDM5CP41229 AL662899.1-201ENST00000461287 2332 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
KDM5CP41229 ELF2-202ENST00000379549 3005 ntTSL 2 BASIC20.17■□□□□ 0.82
KDM5CP41229 XRCC6-202ENST00000360079 2296 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KDM5CP41229 GNG4-201ENST00000366597 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KDM5CP41229 FER1L4-213ENST00000621044 2778 ntTSL 2 BASIC20.17■□□□□ 0.82
KDM5CP41229 KCTD10-208ENST00000540089 3096 ntTSL 2 BASIC20.17■□□□□ 0.82
KDM5CP41229 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC20.17■□□□□ 0.82
KDM5CP41229 HLF-201ENST00000226067 5547 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KDM5CP41229 PIDD1-201ENST00000347755 2998 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KDM5CP41229 PALLD-215ENST00000512127 2958 ntTSL 2 BASIC20.17■□□□□ 0.82
KDM5CP41229 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
KDM5CP41229 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
KDM5CP41229 TMPRSS6-202ENST00000381792 3260 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
KDM5CP41229 AP002851.1-201ENST00000640504 2130 ntTSL 5 BASIC20.17■□□□□ 0.82
KDM5CP41229 USP28-214ENST00000545540 3431 ntTSL 2 BASIC20.17■□□□□ 0.82
KDM5CP41229 RAD51D-203ENST00000394589 2287 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
KDM5CP41229 RCL1-206ENST00000442869 1644 ntTSL 3 BASIC20.17■□□□□ 0.82
KDM5CP41229 MARVELD1-201ENST00000285605 3221 ntAPPRIS P1 TSL 2 BASIC20.17■□□□□ 0.82
KDM5CP41229 C9orf24-202ENST00000379124 648 ntTSL 3 BASIC20.17■□□□□ 0.82
KDM5CP41229 NANOS3-202ENST00000397555 769 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
KDM5CP41229 CR769775.1-203ENST00000399894 579 ntTSL 3 BASIC20.17■□□□□ 0.82
KDM5CP41229 PGAM1P10-201ENST00000402426 761 ntBASIC20.17■□□□□ 0.82
KDM5CP41229 KDM5C-IT1-201ENST00000412242 755 ntTSL 5 BASIC20.17■□□□□ 0.82
KDM5CP41229 CLK2P1-201ENST00000416636 1294 ntBASIC20.17■□□□□ 0.82
KDM5CP41229 AL358876.2-201ENST00000424689 477 ntTSL 3 BASIC20.17■□□□□ 0.82
KDM5CP41229 CTLA4-203ENST00000427473 969 ntTSL 5 BASIC20.17■□□□□ 0.82
KDM5CP41229 AC074019.1-201ENST00000428788 1096 ntBASIC20.17■□□□□ 0.82
KDM5CP41229 IDI2-AS1-204ENST00000437374 896 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
KDM5CP41229 PRDX3P2-201ENST00000447051 611 ntBASIC20.17■□□□□ 0.82
KDM5CP41229 AC008267.3-201ENST00000448776 712 ntBASIC20.17■□□□□ 0.82
KDM5CP41229 AC244097.1-201ENST00000621631 1216 ntBASIC20.17■□□□□ 0.82
KDM5CP41229 AC010601.2-201ENST00000623060 774 ntBASIC20.17■□□□□ 0.82
KDM5CP41229 NAXD-201ENST00000309957 2659 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KDM5CP41229 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
KDM5CP41229 ROCK2-202ENST00000315872 8292 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KDM5CP41229 ZNF219-203ENST00000451119 2918 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
KDM5CP41229 AIFM2-204ENST00000613322 3247 ntAPPRIS P1 TSL 5 BASIC20.16■□□□□ 0.82
KDM5CP41229 NCAPD2-201ENST00000315579 5548 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KDM5CP41229 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC20.16■□□□□ 0.82
KDM5CP41229 TDP2-201ENST00000341060 2120 ntAPPRIS ALT2 TSL 1 (best) BASIC20.16■□□□□ 0.82
KDM5CP41229 CEP78-203ENST00000376598 2404 ntAPPRIS ALT2 TSL 5 BASIC20.16■□□□□ 0.82
KDM5CP41229 TMEM97-201ENST00000226230 2568 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
KDM5CP41229 TBC1D8B-202ENST00000310452 2589 ntTSL 1 (best) BASIC20.16■□□□□ 0.82
KDM5CP41229 NRROS-201ENST00000328557 2564 ntAPPRIS P1 TSL 1 (best) BASIC20.16■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 57.4 ms