Protein–RNA interactions for Protein: P37268

FDFT1, Squalene synthase, humanhuman

Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FDFT1P37268 DYNC1I1-203ENST00000413338 958 ntTSL 2 BASIC14.29□□□□□ -0.12
FDFT1P37268 DUX4L50-201ENST00000455245 715 ntBASIC14.29□□□□□ -0.12
FDFT1P37268 MPZL1-209ENST00000474859 630 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 FBXL8-208ENST00000521920 574 ntTSL 4 BASIC14.29□□□□□ -0.12
FDFT1P37268 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 AL133153.2-201ENST00000557524 303 ntTSL 3 BASIC14.29□□□□□ -0.12
FDFT1P37268 AP003096.1-203ENST00000564469 563 ntTSL 3 BASIC14.29□□□□□ -0.12
FDFT1P37268 LINC00479-204ENST00000589300 718 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC14.29□□□□□ -0.12
FDFT1P37268 NKG7-204ENST00000595217 816 ntTSL 2 BASIC14.29□□□□□ -0.12
FDFT1P37268 ATRAID-207ENST00000606999 956 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 IL1RL2-201ENST00000264257 2615 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 POMP-201ENST00000380842 1330 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 CRELD1-202ENST00000383811 2696 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 PPP1CA-201ENST00000312989 1389 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC14.29□□□□□ -0.12
FDFT1P37268 NIT1-203ENST00000368009 1362 ntAPPRIS P3 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC14.29□□□□□ -0.12
FDFT1P37268 CRTC1-202ENST00000338797 6929 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 CHAT-212ENST00000640822 1412 ntTSL 5 BASIC14.29□□□□□ -0.12
FDFT1P37268 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 C11orf87-201ENST00000327419 5884 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 MAN2C1-216ENST00000563622 2961 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 CCDC187-203ENST00000569961 3158 ntAPPRIS P2 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 LINC00513-201ENST00000447430 1616 ntTSL 5 BASIC14.29□□□□□ -0.12
FDFT1P37268 MGRN1-211ENST00000588994 1665 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 PDK2-203ENST00000503176 3440 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 CD99L2-208ENST00000613030 3742 ntAPPRIS ALT2 TSL 2 BASIC14.29□□□□□ -0.12
FDFT1P37268 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 DLG4-203ENST00000399510 3975 ntTSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 UBE2D3-210ENST00000453744 3990 ntAPPRIS ALT1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC14.29□□□□□ -0.12
FDFT1P37268 AC073862.5-201ENST00000624129 2027 ntBASIC14.29□□□□□ -0.12
FDFT1P37268 MKS1-201ENST00000313863 2091 ntTSL 5 BASIC14.29□□□□□ -0.12
FDFT1P37268 AC006450.3-201ENST00000453529 2146 ntTSL 2 BASIC14.29□□□□□ -0.12
FDFT1P37268 MSMO1-201ENST00000261507 2269 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 TMBIM1-201ENST00000258412 2371 ntAPPRIS P1 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC14.29□□□□□ -0.12
FDFT1P37268 FHOD3-206ENST00000590592 4869 ntAPPRIS ALT2 TSL 1 (best) BASIC14.29□□□□□ -0.12
FDFT1P37268 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 GLB1L-201ENST00000295759 2745 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 ENG-204ENST00000480266 2804 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
FDFT1P37268 PIAS1-202ENST00000545237 2932 ntTSL 2 BASIC14.28□□□□□ -0.12
FDFT1P37268 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 COL6A1-201ENST00000361866 4238 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 RTN4-202ENST00000337526 4790 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 SMARCA2-204ENST00000357248 5855 ntAPPRIS P1 TSL 5 BASIC14.28□□□□□ -0.12
FDFT1P37268 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 RERG-201ENST00000256953 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 OSBPL8-201ENST00000261183 7239 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 TEX12-201ENST00000280358 1147 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC14.28□□□□□ -0.12
FDFT1P37268 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 PDE4D-203ENST00000340635 8232 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 RUFY2-202ENST00000342616 983 ntTSL 2 BASIC14.28□□□□□ -0.12
FDFT1P37268 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 RAB4B-201ENST00000357052 1133 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 GRM1-203ENST00000361719 6754 ntAPPRIS P3 TSL 5 BASIC14.28□□□□□ -0.12
FDFT1P37268 RN7SKP214-201ENST00000364208 315 ntBASIC14.28□□□□□ -0.12
FDFT1P37268 EMC3-AS1-202ENST00000366264 559 ntTSL 4 BASIC14.28□□□□□ -0.12
FDFT1P37268 NCR3-202ENST00000376071 541 ntTSL 5 BASIC14.28□□□□□ -0.12
FDFT1P37268 RCAN2-204ENST00000405162 2457 ntTSL 5 BASIC14.28□□□□□ -0.12
FDFT1P37268 C7orf65-201ENST00000408988 2911 ntTSL 2 BASIC14.28□□□□□ -0.12
FDFT1P37268 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC14.28□□□□□ -0.12
FDFT1P37268 OR8T1P-201ENST00000421347 918 ntBASIC14.28□□□□□ -0.12
FDFT1P37268 ACTN4-203ENST00000424234 1566 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
FDFT1P37268 SNHG14-206ENST00000450809 677 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 ASF1B-202ENST00000474890 765 ntTSL 2 BASIC14.28□□□□□ -0.12
FDFT1P37268 AC125604.1-201ENST00000496255 707 ntBASIC14.28□□□□□ -0.12
FDFT1P37268 SOAT1-204ENST00000540564 6861 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
FDFT1P37268 ZCCHC17-204ENST00000546109 1705 ntTSL 2 BASIC14.28□□□□□ -0.12
FDFT1P37268 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC14.28□□□□□ -0.12
FDFT1P37268 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.28□□□□□ -0.12
FDFT1P37268 AC120498.1-201ENST00000563593 476 ntTSL 4 BASIC14.28□□□□□ -0.12
FDFT1P37268 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC14.28□□□□□ -0.12
FDFT1P37268 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC14.28□□□□□ -0.12
FDFT1P37268 AL356740.1-201ENST00000602192 1297 ntBASIC14.28□□□□□ -0.12
FDFT1P37268 OSBPL8-218ENST00000611266 7239 ntAPPRIS ALT1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 ZCCHC4-206ENST00000612982 938 ntTSL 5 BASIC14.28□□□□□ -0.12
FDFT1P37268 NUDT2-204ENST00000618590 825 ntAPPRIS P1 TSL 3 BASIC14.28□□□□□ -0.12
FDFT1P37268 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 AC079336.7-201ENST00000623428 1078 ntBASIC14.28□□□□□ -0.12
FDFT1P37268 LRWD1-209ENST00000626402 138 ntTSL 3 BASIC14.28□□□□□ -0.12
FDFT1P37268 ABBA01031663.1-201ENST00000635630 790 ntBASIC14.28□□□□□ -0.12
FDFT1P37268 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC14.28□□□□□ -0.12
FDFT1P37268 MBD3L2B-202ENST00000637800 774 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 FASN-206ENST00000634990 8407 ntAPPRIS ALT1 TSL 5 BASIC14.28□□□□□ -0.12
FDFT1P37268 VGLL3-202ENST00000398399 10400 ntAPPRIS P3 TSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 FAM30A-205ENST00000630242 9612 ntTSL 2 BASIC14.28□□□□□ -0.12
FDFT1P37268 NUP98-204ENST00000397004 3923 ntTSL 1 (best) BASIC14.28□□□□□ -0.12
FDFT1P37268 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC14.28□□□□□ -0.12
Retrieved 100 of 98,524 protein–RNA pairs in 87.4 ms