Protein–RNA interactions for Protein: P36406

TRIM23, E3 ubiquitin-protein ligase TRIM23, humanhuman

Predictions only

Length 574 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM23P36406 GRID2IP-203ENST00000457091 3636 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRIM23P36406 NCF4-201ENST00000248899 1396 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 SGK2-201ENST00000341458 2498 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC13.72□□□□□ -0.21
TRIM23P36406 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC13.72□□□□□ -0.21
TRIM23P36406 LHFPL4-201ENST00000287585 4880 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 SPECC1-202ENST00000395522 2982 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 ABCG1-205ENST00000398449 2998 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 PPM1F-201ENST00000263212 5143 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 KMT2E-201ENST00000257745 6714 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 CAMK2D-204ENST00000394522 2696 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 NME7-203ENST00000472647 1590 ntAPPRIS ALT2 TSL 2 BASIC13.72□□□□□ -0.21
TRIM23P36406 COL17A1-201ENST00000353479 5734 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 SIRT5-203ENST00000379262 2339 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 AC010327.5-201ENST00000586923 3061 ntBASIC13.72□□□□□ -0.21
TRIM23P36406 PON3-201ENST00000265627 1105 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 POLR2L-201ENST00000322028 892 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 PPIA-201ENST00000355968 818 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 G0S2-201ENST00000367029 866 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 SSR4-202ENST00000370085 526 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM23P36406 MAGOH-202ENST00000371470 756 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 UPK1A-202ENST00000379013 1016 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 OR7E115P-201ENST00000382617 1024 ntBASIC13.72□□□□□ -0.21
TRIM23P36406 LIF-202ENST00000403987 592 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM23P36406 IGF1-205ENST00000424202 612 ntAPPRIS ALT1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 PTGES3-203ENST00000436399 941 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM23P36406 PIN4P1-201ENST00000451079 396 ntBASIC13.72□□□□□ -0.21
TRIM23P36406 GNG10P1-201ENST00000452289 199 ntBASIC13.72□□□□□ -0.21
TRIM23P36406 PPIA-208ENST00000489459 907 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM23P36406 AC004889.1-205ENST00000493248 531 ntTSL 4 BASIC13.72□□□□□ -0.21
TRIM23P36406 OR2A1-AS1-210ENST00000496968 531 ntBASIC13.72□□□□□ -0.21
TRIM23P36406 AC093826.1-201ENST00000508655 993 ntBASIC13.72□□□□□ -0.21
TRIM23P36406 VENTXP3-201ENST00000546480 773 ntBASIC13.72□□□□□ -0.21
TRIM23P36406 AC051619.5-201ENST00000559003 736 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM23P36406 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC13.72□□□□□ -0.21
TRIM23P36406 AC145207.8-201ENST00000580897 563 ntTSL 4 BASIC13.72□□□□□ -0.21
TRIM23P36406 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 LINC00116-203ENST00000611969 441 ntAPPRIS ALT2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC13.72□□□□□ -0.21
TRIM23P36406 PPIA-210ENST00000620047 827 ntTSL 5 BASIC13.72□□□□□ -0.21
TRIM23P36406 AC114296.1-204ENST00000637197 1173 ntAPPRIS P5 TSL 5 BASIC13.72□□□□□ -0.21
TRIM23P36406 MINDY1-205ENST00000493834 1546 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM23P36406 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 NOP14-203ENST00000416614 3538 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 NUCB1-201ENST00000405315 2668 ntAPPRIS P2 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 VWCE-202ENST00000335613 3640 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 BEND3P1-201ENST00000421591 1944 ntBASIC13.72□□□□□ -0.21
TRIM23P36406 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM23P36406 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 PHLDB1-223ENST00000600882 5479 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 FEM1B-201ENST00000306917 7122 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 POLM-203ENST00000395831 2380 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 PARP3-203ENST00000431474 2360 ntAPPRIS P3 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 CSRNP2-201ENST00000228515 4471 ntAPPRIS P1 TSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 AC004890.2-205ENST00000416232 2804 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM23P36406 NALCN-AS1-201ENST00000457843 2846 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM23P36406 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC13.72□□□□□ -0.21
TRIM23P36406 DSCAM-AS1-202ENST00000427451 1640 ntTSL 1 (best) BASIC13.72□□□□□ -0.21
TRIM23P36406 AC106707.1-201ENST00000475981 1640 ntTSL 2 BASIC13.72□□□□□ -0.21
TRIM23P36406 VPS36-207ENST00000611132 4607 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM23P36406 SEMA3F-202ENST00000413852 3212 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM23P36406 SLC16A1-207ENST00000538576 4374 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRIM23P36406 GCC1-201ENST00000321407 4149 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM23P36406 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM23P36406 SMOC2-201ENST00000354536 3150 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM23P36406 AC067750.1-201ENST00000608826 6545 ntBASIC13.71□□□□□ -0.21
TRIM23P36406 DNASE1L1-206ENST00000393638 2665 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRIM23P36406 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC13.71□□□□□ -0.21
TRIM23P36406 POLM-202ENST00000335195 2444 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM23P36406 ARMCX4-202ENST00000423738 7424 ntAPPRIS P1 TSL 5 BASIC13.71□□□□□ -0.21
TRIM23P36406 IL3RA-201ENST00000331035 1706 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM23P36406 PPIL2-202ENST00000398831 2574 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM23P36406 CCDC186-202ENST00000369286 1928 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM23P36406 TMEM95-201ENST00000330767 1169 ntAPPRIS P3 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM23P36406 MBD3L3-201ENST00000333843 775 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM23P36406 PGLYRP4-202ENST00000368739 2116 ntAPPRIS ALT1 TSL 5 BASIC13.71□□□□□ -0.21
TRIM23P36406 NUDT2-203ENST00000379158 1075 ntAPPRIS P1 TSL 3 BASIC13.71□□□□□ -0.21
TRIM23P36406 HTATIP2-202ENST00000421577 886 ntAPPRIS P1 TSL 2 BASIC13.71□□□□□ -0.21
TRIM23P36406 AC092265.1-201ENST00000422638 498 ntTSL 2 BASIC13.71□□□□□ -0.21
TRIM23P36406 LINC00866-201ENST00000427379 418 ntTSL 2 BASIC13.71□□□□□ -0.21
TRIM23P36406 AL137856.1-201ENST00000429398 773 ntTSL 3 BASIC13.71□□□□□ -0.21
TRIM23P36406 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC13.71□□□□□ -0.21
TRIM23P36406 ZAP70-202ENST00000451498 1085 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM23P36406 LINC00634-202ENST00000505157 222 ntBASIC13.71□□□□□ -0.21
TRIM23P36406 ACTN1-AS1-202ENST00000553961 599 ntTSL 4 BASIC13.71□□□□□ -0.21
TRIM23P36406 LOXL1-AS1-207ENST00000565689 735 ntTSL 3 BASIC13.71□□□□□ -0.21
TRIM23P36406 ZNF790-AS1-203ENST00000588906 850 ntTSL 2 BASIC13.71□□□□□ -0.21
TRIM23P36406 NAMA-206ENST00000605377 509 ntTSL 5 BASIC13.71□□□□□ -0.21
TRIM23P36406 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC13.71□□□□□ -0.21
TRIM23P36406 APBB3-205ENST00000412920 1455 ntAPPRIS ALT1 TSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM23P36406 NMNAT3-202ENST00000339837 1863 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM23P36406 PDLIM2-201ENST00000265810 4592 ntTSL 1 (best) BASIC13.71□□□□□ -0.21
TRIM23P36406 TEX26-AS1-205ENST00000585870 2053 ntTSL 2 BASIC13.71□□□□□ -0.21
TRIM23P36406 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC13.71□□□□□ -0.22
TRIM23P36406 COL11A2-202ENST00000361917 6104 ntAPPRIS ALT2 TSL 5 BASIC13.71□□□□□ -0.22
TRIM23P36406 AGAP10P-201ENST00000454844 2418 ntBASIC13.71□□□□□ -0.22
TRIM23P36406 MAP3K12-205ENST00000547488 2807 ntAPPRIS ALT2 TSL 2 BASIC13.71□□□□□ -0.22
Retrieved 100 of 98,524 protein–RNA pairs in 36.7 ms