Protein–RNA interactions for Protein: P35527

KRT9, Keratin, type I cytoskeletal 9, humanhuman

Predictions only

Length 623 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT9P35527 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
KRT9P35527 LINC01762-204ENST00000434879 436 ntTSL 2 BASIC15.36■□□□□ 0.05
KRT9P35527 SGO1-AS1-201ENST00000441442 499 ntTSL 4 BASIC15.36■□□□□ 0.05
KRT9P35527 GOLGA2P4-201ENST00000441462 777 ntBASIC15.36■□□□□ 0.05
KRT9P35527 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
KRT9P35527 RNMTL1P1-201ENST00000454103 560 ntBASIC15.36■□□□□ 0.05
KRT9P35527 ATG10-207ENST00000513443 978 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
KRT9P35527 FAM86HP-204ENST00000513466 959 ntBASIC15.36■□□□□ 0.05
KRT9P35527 RIT1-205ENST00000539040 919 ntTSL 2 BASIC15.36■□□□□ 0.05
KRT9P35527 NAA40-206ENST00000542163 1035 ntTSL 2 BASIC15.36■□□□□ 0.05
KRT9P35527 PGAM1P5-201ENST00000548011 764 ntBASIC15.36■□□□□ 0.05
KRT9P35527 XRCC3-210ENST00000554974 575 ntTSL 4 BASIC15.36■□□□□ 0.05
KRT9P35527 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC15.36■□□□□ 0.05
KRT9P35527 AL132711.1-201ENST00000557546 722 ntTSL 3 BASIC15.36■□□□□ 0.05
KRT9P35527 MAX-218ENST00000557746 571 ntTSL 4 BASIC15.36■□□□□ 0.05
KRT9P35527 TUBB8-202ENST00000562809 820 ntTSL 5 BASIC15.36■□□□□ 0.05
KRT9P35527 C15orf40-211ENST00000565712 559 ntTSL 3 BASIC15.36■□□□□ 0.05
KRT9P35527 NPLOC4-209ENST00000572760 946 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
KRT9P35527 KLK3-211ENST00000597483 810 ntTSL 2 BASIC15.36■□□□□ 0.05
KRT9P35527 LINC00595-217ENST00000635545 549 ntTSL 4 BASIC15.36■□□□□ 0.05
KRT9P35527 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC15.36■□□□□ 0.05
KRT9P35527 LSM14A-201ENST00000433627 3424 ntAPPRIS ALT1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KRT9P35527 ZNF792-201ENST00000404801 3888 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
KRT9P35527 GSDMA-203ENST00000635792 1546 ntAPPRIS P1 TSL 5 BASIC15.36■□□□□ 0.05
KRT9P35527 GDAP2-201ENST00000369442 2436 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
KRT9P35527 C2-206ENST00000442278 2434 ntTSL 2 BASIC15.36■□□□□ 0.05
KRT9P35527 KCNAB2-212ENST00000458166 1336 ntTSL 2 BASIC15.36■□□□□ 0.05
KRT9P35527 LMBR1-201ENST00000353442 7997 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KRT9P35527 YWHAE-201ENST00000264335 2211 ntAPPRIS P1 TSL 1 (best) BASIC15.36■□□□□ 0.05
KRT9P35527 EWSAT1-201ENST00000415504 2214 ntTSL 2 BASIC15.36■□□□□ 0.05
KRT9P35527 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC15.36■□□□□ 0.05
KRT9P35527 CYP4F23P-201ENST00000593402 1579 ntBASIC15.36■□□□□ 0.05
KRT9P35527 COL18A1-AS1-201ENST00000397787 3425 ntTSL 1 (best) BASIC15.36■□□□□ 0.05
KRT9P35527 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC15.36■□□□□ 0.05
KRT9P35527 FMO6P-201ENST00000236166 1620 ntBASIC15.35■□□□□ 0.05
KRT9P35527 GJB1-201ENST00000361726 1637 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 PRRT2-201ENST00000300797 3002 ntTSL 2 BASIC15.35■□□□□ 0.05
KRT9P35527 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC15.35■□□□□ 0.05
KRT9P35527 AC092171.2-201ENST00000444210 3251 ntTSL 5 BASIC15.35■□□□□ 0.05
KRT9P35527 AC104758.3-203ENST00000562938 2123 ntBASIC15.35■□□□□ 0.05
KRT9P35527 CREBZF-204ENST00000527447 4037 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
KRT9P35527 ABCB7-203ENST00000373394 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 RHPN1-AS1-201ENST00000518049 1918 ntBASIC15.35■□□□□ 0.05
KRT9P35527 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 SLC45A1-201ENST00000289877 2401 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 PLOD2-202ENST00000360060 3665 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 AKR1C2-202ENST00000421196 1481 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 AC005324.3-201ENST00000455584 5514 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
KRT9P35527 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC15.35■□□□□ 0.05
KRT9P35527 LINC02048-201ENST00000440556 1771 ntTSL 5 BASIC15.35■□□□□ 0.05
KRT9P35527 SLC7A8-205ENST00000453702 1752 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 SEMA3F-201ENST00000002829 3802 ntAPPRIS P3 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 AKIP1-201ENST00000299576 1247 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 AKIP1-202ENST00000309357 1232 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 SPRY4-AS1-203ENST00000443800 566 ntTSL 3 BASIC15.35■□□□□ 0.05
KRT9P35527 RPL18P13-201ENST00000478088 569 ntBASIC15.35■□□□□ 0.05
KRT9P35527 UCHL1-207ENST00000508768 827 ntTSL 3 BASIC15.35■□□□□ 0.05
KRT9P35527 AL163636.1-201ENST00000554286 915 ntTSL 5 BASIC15.35■□□□□ 0.05
KRT9P35527 AC021594.1-201ENST00000587174 636 ntTSL 3 BASIC15.35■□□□□ 0.05
KRT9P35527 AC005324.6-201ENST00000587972 613 ntBASIC15.35■□□□□ 0.05
KRT9P35527 MRPL34-203ENST00000595444 863 ntAPPRIS ALT2 TSL 3 BASIC15.35■□□□□ 0.05
KRT9P35527 TECR-207ENST00000596073 1170 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 DIO1-215ENST00000610607 796 ntTSL 5 BASIC15.35■□□□□ 0.05
KRT9P35527 THSD4-202ENST00000355327 9200 ntAPPRIS P1 TSL 5 BASIC15.35■□□□□ 0.05
KRT9P35527 COPS7B-203ENST00000373608 2563 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 BCCIP-202ENST00000299130 2337 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 RAB18-208ENST00000611151 4931 ntTSL 5 BASIC15.35■□□□□ 0.05
KRT9P35527 RTN3-210ENST00000540798 3124 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 MATN1-AS1-201ENST00000414532 3925 ntTSL 2 BASIC15.35■□□□□ 0.05
KRT9P35527 AL024498.2-201ENST00000480294 1589 ntAPPRIS P1 TSL 2 BASIC15.35■□□□□ 0.05
KRT9P35527 RCBTB2-205ENST00000544492 2622 ntTSL 2 BASIC15.35■□□□□ 0.05
KRT9P35527 TOLLIP-203ENST00000525159 3429 ntTSL 2 BASIC15.35■□□□□ 0.05
KRT9P35527 PCDHB19P-202ENST00000625133 2914 ntBASIC15.35■□□□□ 0.05
KRT9P35527 RAB3D-201ENST00000222120 4273 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 LRRC8C-201ENST00000370454 7218 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 EFHC1-221ENST00000636489 2421 ntTSL 5 BASIC15.35■□□□□ 0.05
KRT9P35527 FAM122B-202ENST00000343004 4326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 AC060814.4-201ENST00000594169 2163 ntBASIC15.35■□□□□ 0.05
KRT9P35527 OS9-203ENST00000389142 2457 ntTSL 5 BASIC15.35■□□□□ 0.05
KRT9P35527 RIPK4-201ENST00000332512 3889 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 COL16A1-202ENST00000373668 3643 ntTSL 2 BASIC15.35■□□□□ 0.05
KRT9P35527 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 RS1-201ENST00000379984 2810 ntAPPRIS P1 TSL 1 (best) BASIC15.35■□□□□ 0.05
KRT9P35527 DHX30-201ENST00000348968 3994 ntTSL 5 BASIC15.34■□□□□ 0.05
KRT9P35527 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 CCNG2-202ENST00000395640 1410 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 CCDC142-202ENST00000393965 3406 ntAPPRIS ALT2 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 SLIT3-206ENST00000519560 9706 ntAPPRIS P3 TSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 SERPING1-204ENST00000378324 1751 ntAPPRIS ALT2 TSL 2 BASIC15.34■□□□□ 0.05
KRT9P35527 NAALADL1-201ENST00000340252 2376 ntTSL 5 BASIC15.34■□□□□ 0.05
KRT9P35527 NSD2-203ENST00000382888 2666 ntTSL 1 (best) BASIC15.34■□□□□ 0.05
KRT9P35527 C19orf12-209ENST00000623113 4242 ntTSL 2 BASIC15.34■□□□□ 0.05
KRT9P35527 AC102953.2-201ENST00000609755 3026 ntBASIC15.34■□□□□ 0.05
KRT9P35527 IKZF1-204ENST00000349824 5757 ntTSL 5 BASIC15.34■□□□□ 0.05
KRT9P35527 TUBA3D-201ENST00000321253 1546 ntAPPRIS P1 TSL 1 (best) BASIC15.34■□□□□ 0.05
Retrieved 100 of 98,524 protein–RNA pairs in 49.8 ms