Protein–RNA interactions for Protein: P23025

XPA, DNA repair protein complementing XP-A cells, humanhuman

Predicted RBP Predictions only

Length 273 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XPAP23025 AC025165.3-201ENST00000471530 679 ntTSL 5 BASIC14.16□□□□□ -0.14
XPAP23025 LINC00461-207ENST00000506978 564 ntTSL 5 BASIC14.16□□□□□ -0.14
XPAP23025 RTN4RL2-203ENST00000533205 637 ntTSL 3 BASIC14.16□□□□□ -0.14
XPAP23025 MRPS10-201ENST00000053468 2110 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 AC011921.1-201ENST00000559739 557 ntTSL 4 BASIC14.16□□□□□ -0.14
XPAP23025 HERC2P11-201ENST00000562845 725 ntBASIC14.16□□□□□ -0.14
XPAP23025 MT3-203ENST00000565838 421 ntTSL 3 BASIC14.16□□□□□ -0.14
XPAP23025 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 AC100756.2-201ENST00000569537 736 ntBASIC14.16□□□□□ -0.14
XPAP23025 VRK3-217ENST00000599538 2126 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 AC242426.4-201ENST00000606856 573 ntTSL 5 BASIC14.16□□□□□ -0.14
XPAP23025 BAP1-211ENST00000615113 489 ntBASIC14.16□□□□□ -0.14
XPAP23025 COX6A1P2-201ENST00000620597 330 ntBASIC14.16□□□□□ -0.14
XPAP23025 RNF222-202ENST00000399398 3062 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
XPAP23025 RRAGD-201ENST00000359203 4042 ntTSL 2 BASIC14.16□□□□□ -0.14
XPAP23025 KIAA1683-201ENST00000392413 4402 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 AC061965.1-201ENST00000560524 1465 ntBASIC14.16□□□□□ -0.14
XPAP23025 RTFDC1-203ENST00000395881 1572 ntTSL 2 BASIC14.16□□□□□ -0.14
XPAP23025 ZNF133-203ENST00000377671 2701 ntAPPRIS P3 TSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC14.16□□□□□ -0.14
XPAP23025 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 REV3L-207ENST00000435970 10943 ntTSL 2 BASIC14.16□□□□□ -0.14
XPAP23025 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 PREX1-201ENST00000371941 6636 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 SC5D-202ENST00000392789 2258 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 MIR34AHG-203ENST00000635687 4211 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 SLC24A4-204ENST00000531433 4531 ntAPPRIS ALT2 TSL 2 BASIC14.16□□□□□ -0.14
XPAP23025 SLFNL1-AS1-201ENST00000626479 4800 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 FADS2-201ENST00000257261 2964 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 GATA3-202ENST00000379328 3078 ntAPPRIS ALT1 TSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 TNS1-205ENST00000419504 5921 ntAPPRIS ALT2 TSL 1 (best) BASIC14.16□□□□□ -0.14
XPAP23025 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 ZCCHC17-201ENST00000344147 1605 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 COCH-202ENST00000396618 2536 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 KIAA0895-203ENST00000338533 4132 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 SSTR3-201ENST00000610913 4100 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 HLCS-201ENST00000336648 6010 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 CNOT3-201ENST00000221232 2852 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 SLCO6A1-205ENST00000506729 2689 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 WDR77-201ENST00000235090 2576 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 PUF60-209ENST00000527197 1559 ntTSL 5 BASIC14.15□□□□□ -0.14
XPAP23025 LILRA2-203ENST00000391737 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 BCAS4-202ENST00000371608 6680 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 ZDHHC4-201ENST00000335965 1259 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 FAM163B-201ENST00000356873 1131 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 TNNT2-202ENST00000360372 969 ntTSL 5 BASIC14.15□□□□□ -0.14
XPAP23025 SOD2-202ENST00000367054 815 ntTSL 2 BASIC14.15□□□□□ -0.14
XPAP23025 TNNT2-204ENST00000367317 1050 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
XPAP23025 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 KAZN-204ENST00000400797 1295 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 TNNT2-209ENST00000421663 1084 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 AL606489.1-201ENST00000443515 486 ntTSL 3 BASIC14.15□□□□□ -0.14
XPAP23025 TREX1-202ENST00000444177 1200 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC14.15□□□□□ -0.14
XPAP23025 SCARNA12-201ENST00000459155 270 ntBASIC14.15□□□□□ -0.14
XPAP23025 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
XPAP23025 FRMD4A-204ENST00000475141 1233 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 ORAOV1P1-201ENST00000503108 395 ntBASIC14.15□□□□□ -0.14
XPAP23025 AL691482.3-201ENST00000504773 987 ntTSL 2 BASIC14.15□□□□□ -0.14
XPAP23025 TVP23C-205ENST00000518321 1080 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 IFITM3-202ENST00000526811 543 ntAPPRIS ALT1 TSL 5 BASIC14.15□□□□□ -0.14
XPAP23025 AP002803.1-201ENST00000528836 498 ntBASIC14.15□□□□□ -0.14
XPAP23025 OR5BD1P-201ENST00000532527 817 ntBASIC14.15□□□□□ -0.14
XPAP23025 FOS-204ENST00000554617 796 ntTSL 2 BASIC14.15□□□□□ -0.14
XPAP23025 AC115099.1-201ENST00000570413 362 ntTSL 3 BASIC14.15□□□□□ -0.14
XPAP23025 RN7SL455P-201ENST00000580629 282 ntBASIC14.15□□□□□ -0.14
XPAP23025 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC14.15□□□□□ -0.14
XPAP23025 AC008743.1-201ENST00000596350 813 ntTSL 4 BASIC14.15□□□□□ -0.14
XPAP23025 AC010422.5-201ENST00000597961 585 ntAPPRIS P1 TSL 4 BASIC14.15□□□□□ -0.14
XPAP23025 DYRK1B-208ENST00000601972 772 ntTSL 2 BASIC14.15□□□□□ -0.14
XPAP23025 AP000322.3-201ENST00000608665 388 ntBASIC14.15□□□□□ -0.14
XPAP23025 ACSL3-202ENST00000392066 3147 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
XPAP23025 ITSN1-208ENST00000399349 5191 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 CYB561-201ENST00000360793 3001 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 DGCR2-201ENST00000263196 4480 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 DGCR2-206ENST00000545799 4484 ntTSL 5 BASIC14.15□□□□□ -0.14
XPAP23025 CYP1A1-210ENST00000617691 2521 ntTSL 5 BASIC14.15□□□□□ -0.14
XPAP23025 PDE7B-203ENST00000615259 5234 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 HTR3A-206ENST00000506841 2221 ntTSL 2 BASIC14.15□□□□□ -0.14
XPAP23025 FAM189A1-201ENST00000261275 4705 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
XPAP23025 COL6A3-202ENST00000347401 8625 ntTSL 5 BASIC14.15□□□□□ -0.14
XPAP23025 COL6A3-209ENST00000472056 8628 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 ALOX15-202ENST00000570836 2784 ntAPPRIS P1 TSL 2 BASIC14.15□□□□□ -0.14
XPAP23025 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC14.15□□□□□ -0.14
XPAP23025 SLC34A1-201ENST00000324417 2573 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
XPAP23025 EYA4-205ENST00000430974 2364 ntTSL 2 BASIC14.15□□□□□ -0.14
XPAP23025 HTR3E-203ENST00000425359 1326 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.15
XPAP23025 DACT3-AS1-201ENST00000500689 1304 ntTSL 1 (best) BASIC14.15□□□□□ -0.15
XPAP23025 ETV4-202ENST00000393664 2182 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.15
XPAP23025 SLC19A2-201ENST00000236137 3671 ntAPPRIS P1 TSL 1 (best) BASIC14.14□□□□□ -0.15
XPAP23025 WARS2-202ENST00000369426 2811 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
XPAP23025 TIGD1-201ENST00000408957 2625 ntAPPRIS P1 BASIC14.14□□□□□ -0.15
XPAP23025 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC14.14□□□□□ -0.15
XPAP23025 ZC3HAV1-204ENST00000471652 3182 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
XPAP23025 CNBP-201ENST00000422453 1664 ntAPPRIS P3 TSL 1 (best) BASIC14.14□□□□□ -0.15
XPAP23025 LINC01184-204ENST00000501702 2977 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
XPAP23025 SH3D21-205ENST00000505871 2205 ntTSL 2 BASIC14.14□□□□□ -0.15
XPAP23025 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC14.14□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 102.3 ms