Protein–RNA interactions for Protein: P22223

CDH3, Cadherin-3, humanhuman

Predictions only

Length 829 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH3P22223 ZSCAN5A-206ENST00000587492 1542 ntTSL 2 BASIC13.84□□□□□ -0.19
CDH3P22223 KRT36-202ENST00000393986 1707 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 MANBAL-201ENST00000373605 1915 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CDH3P22223 LDHA-203ENST00000379412 1922 ntAPPRIS P1 TSL 2 BASIC13.84□□□□□ -0.19
CDH3P22223 DNAAF5-202ENST00000403952 1907 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 RASSF3-204ENST00000542104 3492 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
CDH3P22223 VASH2-204ENST00000366966 1369 ntTSL 5 BASIC13.83□□□□□ -0.19
CDH3P22223 CCDC51-202ENST00000412398 1385 ntTSL 2 BASIC13.83□□□□□ -0.19
CDH3P22223 LRP10-203ENST00000546834 1780 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
CDH3P22223 PFAS-201ENST00000314666 5371 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CDH3P22223 UBE3A-224ENST00000635914 9352 ntTSL 5 BASIC13.83□□□□□ -0.19
CDH3P22223 TTC38-201ENST00000381031 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
CDH3P22223 OPN5-202ENST00000371211 1801 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH3P22223 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH3P22223 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
CDH3P22223 TMEM47-201ENST00000275954 4054 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH3P22223 CAMK2B-217ENST00000457475 4142 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH3P22223 SUOX-202ENST00000356124 2306 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH3P22223 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH3P22223 ISY1-RAB43-201ENST00000418265 4868 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
CDH3P22223 JTB-202ENST00000356648 1040 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH3P22223 SYNGR1-204ENST00000381535 1295 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH3P22223 HDDC2-202ENST00000398153 918 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH3P22223 ATP6V1G2-210ENST00000483251 662 ntTSL 3 BASIC13.83□□□□□ -0.2
CDH3P22223 LINC02380-201ENST00000510956 1038 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH3P22223 RNA5SP423-201ENST00000517127 109 ntBASIC13.83□□□□□ -0.2
CDH3P22223 TMEM223-202ENST00000525631 736 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH3P22223 AC040162.4-201ENST00000574912 1185 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CDH3P22223 NAT9-220ENST00000582870 896 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH3P22223 MFSD11-218ENST00000591864 446 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH3P22223 DHPS-207ENST00000594424 1172 ntTSL 3 BASIC13.83□□□□□ -0.2
CDH3P22223 AL133499.1-201ENST00000596207 608 ntBASIC13.83□□□□□ -0.2
CDH3P22223 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH3P22223 HCG18-245ENST00000602550 559 ntTSL 4 BASIC13.83□□□□□ -0.2
CDH3P22223 AC084346.2-201ENST00000607097 949 ntBASIC13.83□□□□□ -0.2
CDH3P22223 MEG3_2.1-201ENST00000611456 105 ntBASIC13.83□□□□□ -0.2
CDH3P22223 ROPN1-211ENST00000620893 1006 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH3P22223 AL353726.2-201ENST00000623259 884 ntBASIC13.83□□□□□ -0.2
CDH3P22223 AC006453.1-201ENST00000636037 1257 ntBASIC13.83□□□□□ -0.2
CDH3P22223 KIFC3-204ENST00000465878 3225 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
CDH3P22223 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC13.83□□□□□ -0.2
CDH3P22223 GNB1L-201ENST00000329517 6706 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH3P22223 CLPB-209ENST00000538039 3078 ntAPPRIS ALT1 TSL 2 BASIC13.83□□□□□ -0.2
CDH3P22223 KRT18P9-201ENST00000604826 1300 ntBASIC13.83□□□□□ -0.2
CDH3P22223 ZBTB49-201ENST00000337872 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH3P22223 CRYBG1-201ENST00000369066 7553 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH3P22223 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC13.83□□□□□ -0.2
CDH3P22223 FP565260.2-201ENST00000623476 1599 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
CDH3P22223 TAF12-201ENST00000263974 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
CDH3P22223 FAM90A2P-201ENST00000511144 1395 ntBASIC13.83□□□□□ -0.2
CDH3P22223 FAM90A25P-201ENST00000528404 1395 ntBASIC13.83□□□□□ -0.2
CDH3P22223 PRKD1-209ENST00000616995 3498 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
CDH3P22223 FGGY-203ENST00000371212 1640 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH3P22223 NDRG4-221ENST00000563799 3014 ntAPPRIS ALT1 TSL 2 BASIC13.82□□□□□ -0.2
CDH3P22223 GRK3-201ENST00000324198 9103 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 BPI-201ENST00000262865 1874 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH3P22223 TGFBRAP1-201ENST00000258449 2827 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CDH3P22223 PPP1R13L-201ENST00000360957 3104 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 CPNE5-201ENST00000244751 3897 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 OPN4-202ENST00000372071 2401 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 AAR2-202ENST00000373932 2689 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 PELP1-201ENST00000301396 3673 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 CCDC117-205ENST00000448492 3937 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH3P22223 GPN3-201ENST00000228827 1468 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 C1orf43-206ENST00000368521 1708 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 USP44-203ENST00000537435 2499 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 MDM1-203ENST00000393543 2718 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 CACNA2D2-204ENST00000424201 5206 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 TMEM2-202ENST00000377044 6523 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 SERPINF1-201ENST00000254722 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 C6orf52-201ENST00000259983 619 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
CDH3P22223 DPCD-202ENST00000370151 858 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 AL606491.1-201ENST00000412797 483 ntTSL 3 BASIC13.82□□□□□ -0.2
CDH3P22223 AC131097.3-203ENST00000420272 1193 ntTSL 5 BASIC13.82□□□□□ -0.2
CDH3P22223 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH3P22223 BX324167.1-201ENST00000451118 805 ntTSL 5 BASIC13.82□□□□□ -0.2
CDH3P22223 GUSBP11-206ENST00000455485 3816 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH3P22223 ZNF124-204ENST00000491356 956 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH3P22223 ATP6V0A2-207ENST00000544833 1013 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH3P22223 AC079328.1-201ENST00000560358 952 ntBASIC13.82□□□□□ -0.2
CDH3P22223 AC016044.1-201ENST00000560818 572 ntTSL 4 BASIC13.82□□□□□ -0.2
CDH3P22223 AC026803.1-201ENST00000569130 274 ntBASIC13.82□□□□□ -0.2
CDH3P22223 ELOF1-202ENST00000586120 658 ntAPPRIS P1 TSL 3 BASIC13.82□□□□□ -0.2
CDH3P22223 PIN1-207ENST00000588695 648 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
CDH3P22223 AC005779.2-201ENST00000593083 550 ntAPPRIS P1 TSL 4 BASIC13.82□□□□□ -0.2
CDH3P22223 AC104506.1-201ENST00000609247 429 ntBASIC13.82□□□□□ -0.2
CDH3P22223 MBD3L2B-201ENST00000636986 860 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 TSN-212ENST00000536142 3328 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH3P22223 KDELR1-201ENST00000330720 1557 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 IGF2BP2-202ENST00000382199 3688 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 DDX41-208ENST00000507955 2607 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 DUSP13-208ENST00000478873 1335 ntTSL 5 BASIC13.82□□□□□ -0.2
CDH3P22223 RET-205ENST00000615310 4337 ntTSL 5 BASIC13.82□□□□□ -0.2
CDH3P22223 AGPAT1-205ENST00000395497 2168 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
CDH3P22223 AL121827.1-201ENST00000370257 3264 ntTSL 2 BASIC13.82□□□□□ -0.2
CDH3P22223 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 NAPB-202ENST00000398425 3824 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
CDH3P22223 ASB3-201ENST00000263634 2214 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 98,524 protein–RNA pairs in 50.7 ms