Protein–RNA interactions for Protein: P20338

RAB4A, Ras-related protein Rab-4A, humanhuman

Predictions only

Length 218 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB4AP20338 KRT18P3-201ENST00000451602 1288 ntBASIC10.78□□□□□ -0.68
RAB4AP20338 BX322559.1-201ENST00000456613 319 ntTSL 3 BASIC10.78□□□□□ -0.68
RAB4AP20338 RHBDL2-203ENST00000540558 697 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 RPL18-209ENST00000550645 463 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB4AP20338 RPL18-214ENST00000552588 559 ntTSL 3 BASIC10.78□□□□□ -0.68
RAB4AP20338 AC025162.1-201ENST00000554022 565 ntTSL 4 BASIC10.78□□□□□ -0.68
RAB4AP20338 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC10.78□□□□□ -0.68
RAB4AP20338 AC090825.1-203ENST00000558188 582 ntTSL 3 BASIC10.78□□□□□ -0.68
RAB4AP20338 OIP5-AS1-209ENST00000561226 775 ntTSL 3 BASIC10.78□□□□□ -0.68
RAB4AP20338 AL589739.1-201ENST00000607720 493 ntBASIC10.78□□□□□ -0.68
RAB4AP20338 SMIM8-209ENST00000608868 815 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
RAB4AP20338 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 SCP2-217ENST00000640998 1101 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB4AP20338 EDRF1-201ENST00000337623 4387 ntAPPRIS P3 TSL 5 BASIC10.78□□□□□ -0.68
RAB4AP20338 STK33-203ENST00000396672 2558 ntAPPRIS P1 TSL 2 BASIC10.78□□□□□ -0.68
RAB4AP20338 ASCC2-201ENST00000307790 2793 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 ADAMTS20-202ENST00000395541 4633 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB4AP20338 RNF121-211ENST00000530137 2202 ntTSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 DHODH-205ENST00000572887 4824 ntAPPRIS ALT1 TSL 5 BASIC10.78□□□□□ -0.68
RAB4AP20338 MPP2-221ENST00000625880 4668 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB4AP20338 LINC00523-206ENST00000556697 2071 ntTSL 2 BASIC10.78□□□□□ -0.68
RAB4AP20338 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 RETREG3-201ENST00000309428 3759 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 AC093525.8-201ENST00000624099 1342 ntBASIC10.78□□□□□ -0.68
RAB4AP20338 LILRB2-204ENST00000391749 2286 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 CU639417.6-202ENST00000624872 3241 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB4AP20338 CPNE4-201ENST00000429747 4184 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 ACO1-203ENST00000541043 3618 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
RAB4AP20338 MTR-202ENST00000366577 10529 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC10.78□□□□□ -0.68
RAB4AP20338 RNF220-202ENST00000355387 3099 ntAPPRIS P1 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 KIF28P-202ENST00000504864 3064 ntBASIC10.78□□□□□ -0.68
RAB4AP20338 DPYSL2-206ENST00000523027 2130 ntTSL 2 BASIC10.78□□□□□ -0.68
RAB4AP20338 LAMA4-219ENST00000522006 6438 ntAPPRIS P3 TSL 1 (best) BASIC10.78□□□□□ -0.68
RAB4AP20338 LBHD1-204ENST00000431002 2915 ntAPPRIS ALT2 TSL 2 BASIC10.78□□□□□ -0.68
RAB4AP20338 ANKDD1A-201ENST00000319580 3110 ntAPPRIS P1 TSL 5 BASIC10.78□□□□□ -0.68
RAB4AP20338 STXBP1-221ENST00000637953 3925 ntTSL 5 BASIC10.78□□□□□ -0.68
RAB4AP20338 GTPBP8-208ENST00000619116 1378 ntTSL 5 BASIC10.77□□□□□ -0.68
RAB4AP20338 EEF2KMT-201ENST00000427587 2390 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.68
RAB4AP20338 CAGE1-201ENST00000296742 2821 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.68
RAB4AP20338 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC10.77□□□□□ -0.68
RAB4AP20338 AC068580.3-201ENST00000449248 2015 ntTSL 1 (best) BASIC10.77□□□□□ -0.68
RAB4AP20338 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC10.77□□□□□ -0.68
RAB4AP20338 MATN3-202ENST00000421259 1443 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
RAB4AP20338 FKBP6-204ENST00000431982 1446 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.68
RAB4AP20338 DARS-AS1-209ENST00000594219 1420 ntTSL 5 BASIC10.77□□□□□ -0.68
RAB4AP20338 RGPD8-203ENST00000409750 5544 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.68
RAB4AP20338 SCN4A-201ENST00000435607 7805 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 QRICH2-201ENST00000262765 5357 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 LINC00637-201ENST00000556586 2056 ntTSL 2 BASIC10.77□□□□□ -0.69
RAB4AP20338 MIS18BP1-201ENST00000310806 4777 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 HNF1A-208ENST00000541395 3332 ntTSL 2 BASIC10.77□□□□□ -0.69
RAB4AP20338 COL20A1-201ENST00000358894 4172 ntAPPRIS P2 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 TMEM86A-201ENST00000280734 3595 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 FAM230B-208ENST00000451257 3566 ntTSL 5 BASIC10.77□□□□□ -0.69
RAB4AP20338 LSM14A-203ENST00000544216 3596 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 FBLN1-208ENST00000442170 2531 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 CCDC28A-201ENST00000332797 1496 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 MADD-210ENST00000407859 5744 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 LHB-201ENST00000221421 514 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 FCN3-201ENST00000270879 1030 ntAPPRIS P4 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 RPS17-201ENST00000330244 592 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 TMEM234-202ENST00000344461 721 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 FCN3-202ENST00000354982 997 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC10.77□□□□□ -0.69
RAB4AP20338 YBX2P1-201ENST00000394192 760 ntBASIC10.77□□□□□ -0.69
RAB4AP20338 SUN1-204ENST00000403868 978 ntTSL 2 BASIC10.77□□□□□ -0.69
RAB4AP20338 PP7080-203ENST00000510604 859 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 FAM92A-214ENST00000522324 1072 ntTSL 2 BASIC10.77□□□□□ -0.69
RAB4AP20338 DRAM1-202ENST00000544152 1048 ntTSL 2 BASIC10.77□□□□□ -0.69
RAB4AP20338 GABARAPL1-217ENST00000545887 571 ntAPPRIS P1 TSL 3 BASIC10.77□□□□□ -0.69
RAB4AP20338 ANKRD34C-AS1-203ENST00000559225 528 ntTSL 4 BASIC10.77□□□□□ -0.69
RAB4AP20338 HEXA-210ENST00000567213 1000 ntTSL 3 BASIC10.77□□□□□ -0.69
RAB4AP20338 AC084262.1-201ENST00000567818 751 ntBASIC10.77□□□□□ -0.69
RAB4AP20338 MRNIP-225ENST00000610475 810 ntTSL 5 BASIC10.77□□□□□ -0.69
RAB4AP20338 IRF5-214ENST00000613821 595 ntTSL 5 BASIC10.77□□□□□ -0.69
RAB4AP20338 HOTAIRM1_1.1-201ENST00000622675 125 ntBASIC10.77□□□□□ -0.69
RAB4AP20338 GTF3C1-201ENST00000356183 7018 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 PLXNA3-201ENST00000369682 10885 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 LILRB2-202ENST00000391746 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 XIRP1-202ENST00000396251 6040 ntAPPRIS ALT2 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 MFAP3L-201ENST00000361618 6318 ntAPPRIS P1 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
RAB4AP20338 ZFAT-202ENST00000429442 4421 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 IRAK1-202ENST00000369974 3319 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 LAMB1-204ENST00000393561 5766 ntTSL 5 BASIC10.77□□□□□ -0.69
RAB4AP20338 MYBPC3-204ENST00000545968 4226 ntAPPRIS P2 TSL 5 BASIC10.77□□□□□ -0.69
RAB4AP20338 ASB3-204ENST00000406687 2205 ntTSL 2 BASIC10.77□□□□□ -0.69
RAB4AP20338 PAX9-202ENST00000402703 3104 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
RAB4AP20338 RIPK4-202ENST00000352483 4016 ntTSL 5 BASIC10.77□□□□□ -0.69
RAB4AP20338 L3MBTL1-204ENST00000418998 3365 ntAPPRIS ALT2 TSL 2 BASIC10.77□□□□□ -0.69
RAB4AP20338 PRLR-211ENST00000511486 1566 ntTSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 PRAMEF8-202ENST00000614831 1592 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
RAB4AP20338 PRAMEF7-202ENST00000616979 1592 ntAPPRIS P1 TSL 5 BASIC10.77□□□□□ -0.69
RAB4AP20338 ZNF829-201ENST00000391711 1805 ntAPPRIS P3 TSL 1 (best) BASIC10.77□□□□□ -0.69
RAB4AP20338 KCNH1-202ENST00000367007 3445 ntTSL 5 BASIC10.77□□□□□ -0.69
Retrieved 100 of 98,524 protein–RNA pairs in 45.1 ms