Protein–RNA interactions for Protein: P09341

CXCL1, Growth-regulated alpha protein, humanhuman

Predictions only

Length 107 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CXCL1P09341 AC026434.2-201ENST00000506094 1078 ntBASIC10.87□□□□□ -0.67
CXCL1P09341 GCOM2-201ENST00000509133 1104 ntBASIC10.87□□□□□ -0.67
CXCL1P09341 EVX1-AS-202ENST00000519050 576 ntTSL 4 BASIC10.87□□□□□ -0.67
CXCL1P09341 MSC-AS1-206ENST00000519751 596 ntTSL 4 BASIC10.87□□□□□ -0.67
CXCL1P09341 AL139349.1-201ENST00000530479 577 ntTSL 4 BASIC10.87□□□□□ -0.67
CXCL1P09341 RAB35-202ENST00000534951 939 ntTSL 2 BASIC10.87□□□□□ -0.67
CXCL1P09341 LINC01975-201ENST00000571890 549 ntTSL 4 BASIC10.87□□□□□ -0.67
CXCL1P09341 FSTL3-202ENST00000588773 746 ntTSL 2 BASIC10.87□□□□□ -0.67
CXCL1P09341 AC010619.1-201ENST00000599536 675 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CXCL1P09341 LINC01515-215ENST00000608678 854 ntTSL 5 BASIC10.87□□□□□ -0.67
CXCL1P09341 ALDH3B1-203ENST00000612297 1231 ntTSL 3 BASIC10.87□□□□□ -0.67
CXCL1P09341 CR392039.2-201ENST00000623182 509 ntBASIC10.87□□□□□ -0.67
CXCL1P09341 TNNI1-202ENST00000361379 5413 ntAPPRIS P2 TSL 5 BASIC10.87□□□□□ -0.67
CXCL1P09341 NAA60-214ENST00000572584 2450 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL1P09341 SRPK3-208ENST00000489426 4479 ntAPPRIS ALT2 TSL 2 BASIC10.87□□□□□ -0.67
CXCL1P09341 RNF43-201ENST00000407977 5516 ntAPPRIS P1 TSL 2 BASIC10.87□□□□□ -0.67
CXCL1P09341 SMARCA4-205ENST00000450717 5506 ntTSL 5 BASIC10.87□□□□□ -0.67
CXCL1P09341 RDM1-224ENST00000619262 1535 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL1P09341 DYSF-208ENST00000410020 6657 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL1P09341 PLXNB2-214ENST00000614805 1387 ntTSL 5 BASIC10.87□□□□□ -0.67
CXCL1P09341 LINC00642-201ENST00000419459 2026 ntTSL 2 BASIC10.87□□□□□ -0.67
CXCL1P09341 HMOX2-201ENST00000219700 1621 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CXCL1P09341 IDO2-204ENST00000502986 2294 ntTSL 5 BASIC10.87□□□□□ -0.67
CXCL1P09341 E2F3-203ENST00000613242 4094 ntTSL 5 BASIC10.87□□□□□ -0.67
CXCL1P09341 MTHFSD-201ENST00000360900 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL1P09341 INO80-202ENST00000401393 5991 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL1P09341 PDE8B-205ENST00000346042 3276 ntTSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL1P09341 ATP2A3-203ENST00000359983 3290 ntTSL 5 BASIC10.87□□□□□ -0.67
CXCL1P09341 OXR1-202ENST00000312046 4406 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL1P09341 CATSPER2P1-203ENST00000429276 1466 ntTSL 2 BASIC10.87□□□□□ -0.67
CXCL1P09341 AC025183.3-201ENST00000623526 1482 ntBASIC10.87□□□□□ -0.67
CXCL1P09341 TECTA-201ENST00000264037 6468 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL1P09341 WDR43-202ENST00000407426 3533 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL1P09341 TTC16-201ENST00000373289 2897 ntAPPRIS P1 TSL 1 (best) BASIC10.87□□□□□ -0.67
CXCL1P09341 MEG3-214ENST00000519709 1726 ntTSL 5 BASIC10.87□□□□□ -0.67
CXCL1P09341 DFFB-201ENST00000338895 3105 ntTSL 2 BASIC10.87□□□□□ -0.67
CXCL1P09341 ZNF266-206ENST00000592292 3100 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.67
CXCL1P09341 KLF4-206ENST00000610832 1956 ntTSL 5 BASIC10.86□□□□□ -0.67
CXCL1P09341 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC10.86□□□□□ -0.67
CXCL1P09341 LANCL1-205ENST00000443314 4781 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 MIS12-202ENST00000573759 2204 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 COL3A1-201ENST00000304636 5543 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 ARID4A-206ENST00000431317 5783 ntTSL 5 BASIC10.86□□□□□ -0.67
CXCL1P09341 USP30-201ENST00000257548 3742 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 AL138725.1-201ENST00000407347 1314 ntBASIC10.86□□□□□ -0.67
CXCL1P09341 AC023355.1-202ENST00000612262 4242 ntTSL 5 BASIC10.86□□□□□ -0.67
CXCL1P09341 KRTAP10-7-201ENST00000609664 1578 ntAPPRIS P1 BASIC10.86□□□□□ -0.67
CXCL1P09341 AAAS-201ENST00000209873 1840 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 CD3EAP-202ENST00000589804 1830 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 CACNA2D3-AS1-201ENST00000471265 2078 ntTSL 2 BASIC10.86□□□□□ -0.67
CXCL1P09341 AC091181.1-201ENST00000623762 2098 ntBASIC10.86□□□□□ -0.67
CXCL1P09341 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC10.86□□□□□ -0.67
CXCL1P09341 ALKBH1-201ENST00000216489 2594 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 LILRB3-203ENST00000391750 2848 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
CXCL1P09341 NLRP7-206ENST00000588756 3826 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 SIGLEC11-203ENST00000447370 3173 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 PYGL-206ENST00000544180 2696 ntTSL 2 BASIC10.86□□□□□ -0.67
CXCL1P09341 RBM4-201ENST00000310092 1694 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 NOSTRIN-203ENST00000397209 1437 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 CSF2RB-202ENST00000403662 4863 ntAPPRIS P2 TSL 5 BASIC10.86□□□□□ -0.67
CXCL1P09341 SLA2-201ENST00000262866 2757 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 PHLPP2-204ENST00000567016 4812 ntAPPRIS ALT2 TSL 5 BASIC10.86□□□□□ -0.67
CXCL1P09341 AL805961.2-201ENST00000642139 4817 ntBASIC10.86□□□□□ -0.67
CXCL1P09341 DDR1-238ENST00000446312 3202 ntTSL 5 BASIC10.86□□□□□ -0.67
CXCL1P09341 MIOX-201ENST00000216075 1130 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 PIP5KL1-201ENST00000300432 1104 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 C19orf33-201ENST00000301246 467 ntAPPRIS P3 TSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 FCN1-201ENST00000371806 1286 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 SNRPC-202ENST00000374017 1054 ntTSL 2 BASIC10.86□□□□□ -0.67
CXCL1P09341 CRLF2-202ENST00000381567 1013 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 PCAT6-201ENST00000417262 748 ntTSL 2 BASIC10.86□□□□□ -0.67
CXCL1P09341 AC026202.2-201ENST00000439325 672 ntTSL 2 BASIC10.86□□□□□ -0.67
CXCL1P09341 MOGAT3-203ENST00000440203 1219 ntAPPRIS ALT2 TSL 2 BASIC10.86□□□□□ -0.67
CXCL1P09341 HLA-J-203ENST00000494367 1087 ntBASIC10.86□□□□□ -0.67
CXCL1P09341 NME2-207ENST00000514264 850 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
CXCL1P09341 C8orf88-201ENST00000517562 894 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
CXCL1P09341 PXN-AS1-202ENST00000538804 508 ntTSL 4 BASIC10.86□□□□□ -0.67
CXCL1P09341 MPI-209ENST00000564003 1195 ntTSL 2 BASIC10.86□□□□□ -0.67
CXCL1P09341 AC140878.1-201ENST00000565277 250 ntBASIC10.86□□□□□ -0.67
CXCL1P09341 COMMD4-217ENST00000567195 677 ntTSL 2 BASIC10.86□□□□□ -0.67
CXCL1P09341 AC011479.1-202ENST00000591889 528 ntAPPRIS P1 TSL 2 BASIC10.86□□□□□ -0.67
CXCL1P09341 AL158211.3-201ENST00000607385 239 ntBASIC10.86□□□□□ -0.67
CXCL1P09341 AL662799.1-202ENST00000614205 422 ntBASIC10.86□□□□□ -0.67
CXCL1P09341 AGAP1-213ENST00000619456 1057 ntTSL 5 BASIC10.86□□□□□ -0.67
CXCL1P09341 CARS-201ENST00000278224 2491 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 AC002550.1-201ENST00000565916 1379 ntTSL 5 BASIC10.86□□□□□ -0.67
CXCL1P09341 CREB3L3-204ENST00000602147 1382 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 MYO19-203ENST00000610930 3271 ntTSL 5 BASIC10.86□□□□□ -0.67
CXCL1P09341 NT5C3A-214ENST00000620705 1704 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 AC106865.1-201ENST00000602666 3034 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 TREH-201ENST00000264029 2771 ntAPPRIS P1 TSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 ALDH3A1-202ENST00000395555 1495 ntTSL 3 BASIC10.86□□□□□ -0.67
CXCL1P09341 AC098934.1-201ENST00000443294 1835 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 BCKDK-204ENST00000394951 2164 ntAPPRIS P1 TSL 5 BASIC10.86□□□□□ -0.67
CXCL1P09341 PACRG-AS1-201ENST00000626335 2192 ntTSL 2 BASIC10.86□□□□□ -0.67
CXCL1P09341 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 ZNF789-209ENST00000483089 2994 ntTSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 CACNA1G-225ENST00000512389 6837 ntAPPRIS ALT2 TSL 1 (best) BASIC10.86□□□□□ -0.67
CXCL1P09341 APBB1-220ENST00000609331 1574 ntTSL 5 BASIC10.86□□□□□ -0.67
CXCL1P09341 UBE3A-228ENST00000638155 9131 ntAPPRIS P3 TSL 5 BASIC10.86□□□□□ -0.67
Retrieved 100 of 98,524 protein–RNA pairs in 63.1 ms