Protein–RNA interactions for Protein: P07996

THBS1, Thrombospondin-1, humanhuman

Predictions only

Length 1,170 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
THBS1P07996 SLC2A11-223ENST00000611880 3264 ntTSL 2 BASIC12.93□□□□□ -0.34
THBS1P07996 GRN-222ENST00000639447 1314 ntTSL 2 BASIC12.93□□□□□ -0.34
THBS1P07996 SERTAD2-201ENST00000313349 5549 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 FAM198B-201ENST00000296530 4985 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 USP48-213ENST00000529637 3228 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 SEMA7A-202ENST00000542748 3228 ntTSL 5 BASIC12.93□□□□□ -0.34
THBS1P07996 ARAF-201ENST00000290277 2504 ntAPPRIS ALT1 TSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC12.93□□□□□ -0.34
THBS1P07996 RBM6-211ENST00000443081 4010 ntTSL 5 BASIC12.93□□□□□ -0.34
THBS1P07996 XPO7-201ENST00000252512 4861 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 PQBP1-201ENST00000218224 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 PQBP1-202ENST00000247140 664 ntTSL 3 BASIC12.93□□□□□ -0.34
THBS1P07996 THEG-202ENST00000346878 1211 ntAPPRIS ALT2 TSL 2 BASIC12.93□□□□□ -0.34
THBS1P07996 FCRLB-203ENST00000367945 1131 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 FCGR1B-203ENST00000369384 1044 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 PQBP1-203ENST00000376563 1056 ntAPPRIS P1 TSL 2 BASIC12.93□□□□□ -0.34
THBS1P07996 PQBP1-204ENST00000376566 760 ntTSL 3 BASIC12.93□□□□□ -0.34
THBS1P07996 PQBP1-205ENST00000396763 965 ntAPPRIS P1 TSL 5 BASIC12.93□□□□□ -0.34
THBS1P07996 LBH-202ENST00000401506 485 ntTSL 3 BASIC12.93□□□□□ -0.34
THBS1P07996 COPS7B-205ENST00000409295 1009 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 AL672291.1-201ENST00000417047 462 ntTSL 3 BASIC12.93□□□□□ -0.34
THBS1P07996 OR8T1P-201ENST00000421347 918 ntBASIC12.93□□□□□ -0.34
THBS1P07996 AL157902.1-202ENST00000425010 763 ntTSL 3 BASIC12.93□□□□□ -0.34
THBS1P07996 PQBP1-207ENST00000447146 1020 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 TNFRSF14-AS1-206ENST00000452793 569 ntTSL 3 BASIC12.93□□□□□ -0.34
THBS1P07996 CYP51A1-AS1-201ENST00000453068 2957 ntTSL 5 BASIC12.93□□□□□ -0.34
THBS1P07996 LINC00887-204ENST00000456816 796 ntTSL 3 BASIC12.93□□□□□ -0.34
THBS1P07996 AC092958.2-201ENST00000476987 492 ntTSL 3 BASIC12.93□□□□□ -0.34
THBS1P07996 AC005740.1-201ENST00000515639 522 ntBASIC12.93□□□□□ -0.34
THBS1P07996 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC12.93□□□□□ -0.34
THBS1P07996 PSENEN-203ENST00000591949 833 ntTSL 2 BASIC12.93□□□□□ -0.34
THBS1P07996 TP53-221ENST00000615910 1149 ntTSL 5 BASIC12.93□□□□□ -0.34
THBS1P07996 ANXA8L1-206ENST00000619162 1109 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 RARG-202ENST00000394426 2640 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC12.93□□□□□ -0.34
THBS1P07996 HEXA-206ENST00000566304 1795 ntTSL 2 BASIC12.93□□□□□ -0.34
THBS1P07996 FMNL3-205ENST00000550488 4120 ntAPPRIS ALT2 TSL 5 BASIC12.93□□□□□ -0.34
THBS1P07996 TUBGCP6-201ENST00000248846 5612 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 APOL5-201ENST00000249044 1438 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 SVOPL-201ENST00000288513 1413 ntTSL 2 BASIC12.93□□□□□ -0.34
THBS1P07996 HFE-202ENST00000317896 1922 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 SLC35G2-201ENST00000393079 1577 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 DENND3-202ENST00000424248 4740 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 DCUN1D4-202ENST00000381441 4207 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 GET4-202ENST00000407192 4356 ntAPPRIS ALT2 TSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 PLEKHG6-201ENST00000011684 2881 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 ACADM-218ENST00000541113 2535 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 LATS1-207ENST00000543571 7517 ntAPPRIS P1 TSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 AL121992.1-201ENST00000428945 2845 ntTSL 2 BASIC12.93□□□□□ -0.34
THBS1P07996 PDHB-206ENST00000474765 1503 ntTSL 5 BASIC12.93□□□□□ -0.34
THBS1P07996 KLHL13-204ENST00000371882 3256 ntTSL 1 (best) BASIC12.93□□□□□ -0.34
THBS1P07996 ATN1-201ENST00000356654 4351 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 CPXM2-201ENST00000241305 3554 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC12.92□□□□□ -0.34
THBS1P07996 NGEF-201ENST00000264051 3215 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 IL20RA-203ENST00000367748 3522 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 SPATA12-201ENST00000334325 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
THBS1P07996 PLAT-203ENST00000429089 2599 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
THBS1P07996 FXYD3-208ENST00000604404 1322 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 TMEM200A-204ENST00000617887 2899 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
THBS1P07996 OPRM1-201ENST00000229768 1465 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 OPRM1-207ENST00000428397 1481 ntAPPRIS P3 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 AC024075.2-201ENST00000598112 1473 ntBASIC12.92□□□□□ -0.34
THBS1P07996 ABHD18-206ENST00000611882 1493 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 AL356258.1-201ENST00000605929 2246 ntTSL 2 BASIC12.92□□□□□ -0.34
THBS1P07996 AHCY-205ENST00000538132 2366 ntTSL 2 BASIC12.92□□□□□ -0.34
THBS1P07996 GALC-206ENST00000544807 2528 ntTSL 2 BASIC12.92□□□□□ -0.34
THBS1P07996 CDK11A-201ENST00000356200 2653 ntTSL 5 BASIC12.92□□□□□ -0.34
THBS1P07996 PPIP5K1-209ENST00000420765 5718 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
THBS1P07996 CCHCR1-203ENST00000396268 2958 ntAPPRIS ALT2 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 SETD1A-201ENST00000262519 6451 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 KCNV1-201ENST00000297404 2927 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 SIGLECL1-201ENST00000316401 1708 ntAPPRIS P3 TSL 2 BASIC12.92□□□□□ -0.34
THBS1P07996 VSIG2-201ENST00000326621 1148 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 NUDT2-201ENST00000346365 960 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 GJB1-203ENST00000374029 1587 ntAPPRIS P1 TSL 5 BASIC12.92□□□□□ -0.34
THBS1P07996 AL589935.1-203ENST00000412751 465 ntTSL 3 BASIC12.92□□□□□ -0.34
THBS1P07996 FLJ37035-201ENST00000419400 446 ntTSL 3 BASIC12.92□□□□□ -0.34
THBS1P07996 FAM9B-203ENST00000428477 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 AC244250.1-201ENST00000438185 451 ntTSL 2 BASIC12.92□□□□□ -0.34
THBS1P07996 DUX4L50-201ENST00000455245 715 ntBASIC12.92□□□□□ -0.34
THBS1P07996 CPLX2-209ENST00000515094 576 ntAPPRIS P1 TSL 4 BASIC12.92□□□□□ -0.34
THBS1P07996 SCARNA20.5-201ENST00000516991 142 ntBASIC12.92□□□□□ -0.34
THBS1P07996 RNA5SP423-201ENST00000517127 109 ntBASIC12.92□□□□□ -0.34
THBS1P07996 AC044849.1-201ENST00000519737 1188 ntBASIC12.92□□□□□ -0.34
THBS1P07996 SNAP91-215ENST00000521743 4263 ntAPPRIS P2 TSL 5 BASIC12.92□□□□□ -0.34
THBS1P07996 STC1-202ENST00000524323 1748 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 RHOQP1-201ENST00000555758 579 ntBASIC12.92□□□□□ -0.34
THBS1P07996 ELP5-212ENST00000574255 671 ntTSL 2 BASIC12.92□□□□□ -0.34
THBS1P07996 PRCD-210ENST00000592014 462 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 FAM236A-201ENST00000593662 453 ntAPPRIS ALT2 TSL 2 BASIC12.92□□□□□ -0.34
THBS1P07996 SELENOW-204ENST00000595615 535 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
THBS1P07996 FAM236B-201ENST00000596535 465 ntAPPRIS P1 TSL 2 BASIC12.92□□□□□ -0.34
THBS1P07996 TMEM145-203ENST00000598766 2011 ntAPPRIS ALT2 TSL 5 BASIC12.92□□□□□ -0.34
THBS1P07996 C20orf141-202ENST00000603872 580 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Retrieved 100 of 98,524 protein–RNA pairs in 71.5 ms