Protein–RNA interactions for Protein: P06727

APOA4, Apolipoprotein A-IV, humanhuman

Predictions only

Length 396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOA4P06727 CLTCL1-212ENST00000622493 1714 ntTSL 2 BASIC14.08□□□□□ -0.16
APOA4P06727 CES3-201ENST00000303334 3834 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 EIF3F-201ENST00000309828 1254 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 EDF1-202ENST00000371648 809 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 CDKN1A-202ENST00000373711 793 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
APOA4P06727 C9orf24-203ENST00000379126 496 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 CES3-202ENST00000394037 3817 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 LINC00686-201ENST00000435412 332 ntTSL 3 BASIC14.08□□□□□ -0.16
APOA4P06727 ANP32A-210ENST00000560303 724 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
APOA4P06727 CDIP1-202ENST00000562334 1205 ntTSL 2 BASIC14.08□□□□□ -0.16
APOA4P06727 AC025259.3-202ENST00000564363 687 ntTSL 2 BASIC14.08□□□□□ -0.16
APOA4P06727 AC020914.3-201ENST00000594712 304 ntBASIC14.08□□□□□ -0.16
APOA4P06727 MEF2C-227ENST00000626391 1182 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 MEF2C-231ENST00000628656 1254 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 ALDH3A2-226ENST00000631291 3822 ntTSL 5 BASIC14.08□□□□□ -0.16
APOA4P06727 NAP1L6-202ENST00000641404 1222 ntBASIC14.08□□□□□ -0.16
APOA4P06727 C12orf76-201ENST00000309050 1964 ntTSL 2 BASIC14.08□□□□□ -0.16
APOA4P06727 MIRLET7BHG-201ENST00000360737 4560 ntTSL 2 BASIC14.08□□□□□ -0.16
APOA4P06727 MBP-205ENST00000397860 4844 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 ABCF3-201ENST00000292808 2453 ntAPPRIS ALT1 TSL 2 BASIC14.08□□□□□ -0.16
APOA4P06727 SACM1L-201ENST00000389061 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 FLNC-202ENST00000346177 9042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 POM121L14P-201ENST00000406100 1558 ntBASIC14.08□□□□□ -0.16
APOA4P06727 C3orf33-205ENST00000534941 1804 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 TRAPPC10-201ENST00000291574 6976 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 EGR1-201ENST00000239938 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 CCNH-201ENST00000256897 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 TMEM25-204ENST00000359862 2395 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 BIRC2-208ENST00000532672 2617 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
APOA4P06727 AP002761.4-201ENST00000565433 3361 ntBASIC14.08□□□□□ -0.16
APOA4P06727 NPC1-201ENST00000269228 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 FLI1-201ENST00000281428 4151 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 MSH5-202ENST00000375740 2669 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
APOA4P06727 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 SEC14L3-204ENST00000403066 2474 ntTSL 2 BASIC14.07□□□□□ -0.16
APOA4P06727 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
APOA4P06727 CACNA1G-230ENST00000514717 6699 ntAPPRIS ALT2 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 TRMT1L-201ENST00000367506 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 SNHG28-201ENST00000368102 2501 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
APOA4P06727 OSBPL5-201ENST00000263650 3889 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 AL445250.1-201ENST00000641671 2259 ntBASIC14.07□□□□□ -0.16
APOA4P06727 FOSB-213ENST00000615753 1468 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 OR2C3-204ENST00000641802 8509 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
APOA4P06727 CA12-201ENST00000178638 6413 ntAPPRIS P4 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 MX1-202ENST00000398598 2850 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 KPNA4-201ENST00000334256 8981 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.07□□□□□ -0.16
APOA4P06727 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
APOA4P06727 EDC3-201ENST00000315127 3763 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 HNRNPA1P41-201ENST00000397777 928 ntBASIC14.07□□□□□ -0.16
APOA4P06727 CRCP-204ENST00000398684 492 ntTSL 2 BASIC14.07□□□□□ -0.16
APOA4P06727 AL139125.1-201ENST00000420395 557 ntTSL 3 BASIC14.07□□□□□ -0.16
APOA4P06727 AL008707.1-201ENST00000422498 534 ntBASIC14.07□□□□□ -0.16
APOA4P06727 VAMP8-203ENST00000432071 664 ntTSL 3 BASIC14.07□□□□□ -0.16
APOA4P06727 AP002748.3-205ENST00000525142 567 ntTSL 3 BASIC14.07□□□□□ -0.16
APOA4P06727 AP002748.3-203ENST00000533502 581 ntTSL 3 BASIC14.07□□□□□ -0.16
APOA4P06727 AC117500.3-201ENST00000537032 666 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 SEC23A-204ENST00000548032 907 ntTSL 2 BASIC14.07□□□□□ -0.16
APOA4P06727 CD63-208ENST00000549117 1233 ntAPPRIS P1 TSL 3 BASIC14.07□□□□□ -0.16
APOA4P06727 AC145207.3-201ENST00000576784 529 ntTSL 5 BASIC14.07□□□□□ -0.16
APOA4P06727 SKA2-205ENST00000580541 689 ntTSL 3 BASIC14.07□□□□□ -0.16
APOA4P06727 AL645941.3-201ENST00000580587 577 ntTSL 4 BASIC14.07□□□□□ -0.16
APOA4P06727 MIR3188-201ENST00000583494 85 ntBASIC14.07□□□□□ -0.16
APOA4P06727 AC099811.3-201ENST00000586351 425 ntTSL 3 BASIC14.07□□□□□ -0.16
APOA4P06727 KC6-205ENST00000599934 556 ntTSL 4 BASIC14.07□□□□□ -0.16
APOA4P06727 AC026740.1-201ENST00000607068 791 ntBASIC14.07□□□□□ -0.16
APOA4P06727 ELOA3C-201ENST00000620688 1218 ntAPPRIS P1 BASIC14.07□□□□□ -0.16
APOA4P06727 AC244452.3-201ENST00000636814 210 ntBASIC14.07□□□□□ -0.16
APOA4P06727 AL805961.1-203ENST00000641078 1258 ntBASIC14.07□□□□□ -0.16
APOA4P06727 CNTLN-201ENST00000380641 4871 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
APOA4P06727 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC14.07□□□□□ -0.16
APOA4P06727 IFT172-202ENST00000359466 2207 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 SYCP2L-201ENST00000283141 3130 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 TGIF2-201ENST00000373872 3406 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 SNCA-204ENST00000394989 3167 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 PPT1-203ENST00000433473 2267 ntAPPRIS ALT1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 ZMYND15-206ENST00000592813 2274 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 NTN4-203ENST00000538383 1971 ntTSL 2 BASIC14.07□□□□□ -0.16
APOA4P06727 SLC38A6-201ENST00000267488 1688 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 LIMS2-209ENST00000410038 1695 ntTSL 2 BASIC14.07□□□□□ -0.16
APOA4P06727 ZHX1-202ENST00000395571 5108 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 WASF3-202ENST00000361042 4823 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 FAM224B-201ENST00000458667 2032 ntTSL 2 BASIC14.07□□□□□ -0.16
APOA4P06727 ING4-201ENST00000341550 1709 ntAPPRIS P3 TSL 1 (best) BASIC14.07□□□□□ -0.16
APOA4P06727 S100PBP-203ENST00000373476 3320 ntAPPRIS P1 TSL 2 BASIC14.07□□□□□ -0.16
APOA4P06727 BEND3P3-201ENST00000611030 2440 ntBASIC14.06□□□□□ -0.16
APOA4P06727 SAMD4A-213ENST00000631086 6677 ntTSL 5 BASIC14.06□□□□□ -0.16
APOA4P06727 TMBIM6-217ENST00000549385 2771 ntAPPRIS P3 TSL 5 BASIC14.06□□□□□ -0.16
APOA4P06727 MOGAT3-201ENST00000223114 2132 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 YTHDF3-209ENST00000617200 5076 ntTSL 5 BASIC14.06□□□□□ -0.16
APOA4P06727 CRYL1-201ENST00000298248 1485 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 KRT8P21-201ENST00000430398 1491 ntBASIC14.06□□□□□ -0.16
APOA4P06727 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
APOA4P06727 AC010970.1-201ENST00000445125 1848 ntBASIC14.06□□□□□ -0.16
APOA4P06727 STK26-204ENST00000481105 1835 ntTSL 2 BASIC14.06□□□□□ -0.16
APOA4P06727 STK40-201ENST00000359297 4837 ntTSL 2 BASIC14.06□□□□□ -0.16
APOA4P06727 PRAME-202ENST00000398743 2196 ntAPPRIS P2 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 98,524 protein–RNA pairs in 44.2 ms