Protein–RNA interactions for Protein: P01733

TRBV12-3, T-cell receptor beta chain V region YT35, humanhuman

Predictions only

Length 135 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV12-3P01733 B4GALT3-202ENST00000367998 1871 ntAPPRIS P1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 SLC6A9-207ENST00000475075 1881 ntTSL 2 BASIC10.83□□□□□ -0.68
TRBV12-3P01733 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 MED22-209ENST00000610888 3867 ntAPPRIS ALT1 TSL 1 (best) BASIC10.83□□□□□ -0.68
TRBV12-3P01733 EPHX1-202ENST00000366837 1780 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 KAT7-204ENST00000454930 1774 ntTSL 2 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 AP003555.1-202ENST00000511013 1755 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 IL12RB1-203ENST00000593993 2782 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 SLC25A18-201ENST00000327451 2244 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 SLFNL1-204ENST00000372613 2654 ntTSL 2 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 CARMIL2-202ENST00000545661 4119 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 VWA8-201ENST00000281496 3475 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 SLC12A7-201ENST00000264930 5280 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 MTCL1-202ENST00000359865 6093 ntAPPRIS P2 TSL 2 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 AL356753.1-201ENST00000427035 2018 ntTSL 2 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 MYH16-204ENST00000452010 1599 ntTSL 5 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 CHRND-206ENST00000543200 2918 ntTSL 2 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 KLF4-201ENST00000374672 2813 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 COL1A2-201ENST00000297268 5411 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 SCFD1-203ENST00000458591 2359 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 AGAP12P-201ENST00000585227 2359 ntBASIC10.82□□□□□ -0.68
TRBV12-3P01733 TONSL-201ENST00000409379 4502 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 ZBTB17-202ENST00000375743 2745 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 GID4-201ENST00000268719 4237 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 NDUFB6-203ENST00000379847 1366 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 PVR-205ENST00000425690 3325 ntAPPRIS P3 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 SPG11-210ENST00000558319 6426 ntAPPRIS ALT2 TSL 5 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 TMEM104-201ENST00000335464 4745 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 IRAK3-201ENST00000261233 8663 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 FERD3L-201ENST00000275461 640 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 SLC25A26-201ENST00000336733 1023 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 COL5A1-AS1-201ENST00000371813 336 ntTSL 2 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 TRBJ2-6-201ENST00000390418 53 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 AL627231.1-201ENST00000394467 1125 ntBASIC10.82□□□□□ -0.68
TRBV12-3P01733 HLA-DQB2-229ENST00000411527 1059 ntBASIC10.82□□□□□ -0.68
TRBV12-3P01733 AL139339.1-201ENST00000411906 657 ntTSL 2 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 AC034228.2-201ENST00000432558 459 ntTSL 3 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 CSHL1-205ENST00000438387 566 ntTSL 5 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 KLHDC8A-203ENST00000460687 1022 ntTSL 5 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 PGAP2-212ENST00000464906 1259 ntTSL 2 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 RN7SL769P-201ENST00000469386 295 ntBASIC10.82□□□□□ -0.68
TRBV12-3P01733 NDUFS6P1-201ENST00000485187 316 ntBASIC10.82□□□□□ -0.68
TRBV12-3P01733 UPK1B-205ENST00000497685 981 ntTSL 2 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 ENDOV-229ENST00000523999 864 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 ERH-203ENST00000557016 1124 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 AC133919.1-201ENST00000562203 416 ntTSL 3 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 IGHV3OR16-12-201ENST00000570121 353 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 AC068152.1-201ENST00000575930 685 ntTSL 5 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 PGPEP1-203ENST00000595066 762 ntTSL 2 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 LINC01233-203ENST00000601708 494 ntTSL 3 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 CR392039.2-201ENST00000623182 509 ntBASIC10.82□□□□□ -0.68
TRBV12-3P01733 CMC2-224ENST00000630396 481 ntTSL 5 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 NCF4-202ENST00000397147 1641 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 TRIM4-201ENST00000349062 3374 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 PSMC1-201ENST00000261303 4448 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 CFLAR-206ENST00000395148 4415 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 SYNRG-231ENST00000622045 3859 ntAPPRIS ALT2 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 RBM26-203ENST00000438737 4132 ntTSL 5 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 MCPH1-AS1-201ENST00000515608 2147 ntTSL 5 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 TCHH-202ENST00000614923 6995 ntAPPRIS P1 TSL 5 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 ADAMTSL4-201ENST00000271643 4250 ntAPPRIS P3 TSL 5 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 HSPA6-201ENST00000309758 2371 ntAPPRIS P1 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 SLC47A1-206ENST00000571335 1415 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 DLX1-203ENST00000361725 2640 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 AC022028.2-201ENST00000474115 2619 ntTSL 2 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 MMAB-210ENST00000545712 4438 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 LINC01535-206ENST00000592712 1699 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 SPECC1L-ADORA2A-201ENST00000358654 6204 ntAPPRIS P1 TSL 2 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 TMCC3-201ENST00000261226 5877 ntAPPRIS P1 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 CPNE5-202ENST00000393189 2542 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC10.82□□□□□ -0.68
TRBV12-3P01733 MBD1-212ENST00000585672 2532 ntTSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 PDE8A-201ENST00000310298 3984 ntAPPRIS P4 TSL 1 (best) BASIC10.82□□□□□ -0.68
TRBV12-3P01733 TBC1D27-202ENST00000424239 1573 ntBASIC10.82□□□□□ -0.68
TRBV12-3P01733 GNAO1-214ENST00000638705 3529 ntAPPRIS P5 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 SPATS2L-209ENST00000409988 2698 ntAPPRIS P1 TSL 2 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 TPM3P9-201ENST00000424846 2920 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 LINC02135-201ENST00000599486 2065 ntTSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 CACNA1C-211ENST00000399617 7482 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 RTF1-201ENST00000389629 5021 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 SIPA1L3-201ENST00000222345 7987 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 AC004554.1-201ENST00000422830 1468 ntBASIC10.81□□□□□ -0.68
TRBV12-3P01733 HMOX2-216ENST00000613539 1703 ntTSL 5 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 NCLP1-201ENST00000445357 1963 ntBASIC10.81□□□□□ -0.68
TRBV12-3P01733 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 POM121-201ENST00000358357 5320 ntAPPRIS P3 TSL 1 (best) BASIC10.81□□□□□ -0.68
TRBV12-3P01733 KBTBD7-201ENST00000379483 4734 ntAPPRIS P1 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 UBE3C-202ENST00000389103 1626 ntTSL 5 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 ZNF800-203ENST00000393313 4358 ntAPPRIS P1 TSL 5 BASIC10.81□□□□□ -0.68
TRBV12-3P01733 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC10.81□□□□□ -0.68
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms