Protein–RNA interactions for Protein: O43909

EXTL3, Exostosin-like 3, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
EXTL3O43909 RIC1-201ENST00000251879 4127 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 LHFPL3-201ENST00000401970 1378 ntAPPRIS ALT1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 VWA5B2-202ENST00000426955 4120 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 MS4A15-201ENST00000337911 1536 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 DAZL-201ENST00000250863 3104 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 TRAK1-203ENST00000396175 5033 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
EXTL3O43909 BAK1-201ENST00000360661 2132 ntTSL 5 BASIC15.13■□□□□ 0.01
EXTL3O43909 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 SPDYE4-201ENST00000328794 923 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 TCL1B-201ENST00000340722 1166 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 IL27-201ENST00000356897 1044 ntAPPRIS P2 TSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 TPM3-211ENST00000368531 1115 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 AIF1L-205ENST00000372301 671 ntTSL 2 BASIC15.13■□□□□ 0.01
EXTL3O43909 TSPO2-201ENST00000373158 718 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 MPP6-202ENST00000396475 3848 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 MIR1307-201ENST00000408840 149 ntBASIC15.13■□□□□ 0.01
EXTL3O43909 RNF123-203ENST00000433785 1555 ntTSL 5 BASIC15.13■□□□□ 0.01
EXTL3O43909 HILPDA-202ENST00000435296 785 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
EXTL3O43909 LINC00466-203ENST00000436475 1059 ntTSL 5 BASIC15.13■□□□□ 0.01
EXTL3O43909 AC009474.1-201ENST00000455096 1565 ntBASIC15.13■□□□□ 0.01
EXTL3O43909 TXNRD2-206ENST00000462330 1129 ntTSL 3 BASIC15.13■□□□□ 0.01
EXTL3O43909 SPOCK3-210ENST00000506886 2947 ntAPPRIS ALT2 TSL 5 BASIC15.13■□□□□ 0.01
EXTL3O43909 ANXA5-210ENST00000515017 1190 ntTSL 5 BASIC15.13■□□□□ 0.01
EXTL3O43909 PLEKHA8P1-203ENST00000545609 277 ntTSL 3 BASIC15.13■□□□□ 0.01
EXTL3O43909 ALG10B-203ENST00000551464 571 ntTSL 3 BASIC15.13■□□□□ 0.01
EXTL3O43909 LETMD1-235ENST00000552739 1713 ntTSL 2 BASIC15.13■□□□□ 0.01
EXTL3O43909 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC15.13■□□□□ 0.01
EXTL3O43909 HERC2P11-201ENST00000562845 725 ntBASIC15.13■□□□□ 0.01
EXTL3O43909 AC100756.2-201ENST00000569537 736 ntBASIC15.13■□□□□ 0.01
EXTL3O43909 AP000894.2-204ENST00000577358 473 ntTSL 5 BASIC15.13■□□□□ 0.01
EXTL3O43909 LINC01543-201ENST00000578367 900 ntTSL 5 BASIC15.13■□□□□ 0.01
EXTL3O43909 MIR4750-201ENST00000584564 56 ntBASIC15.13■□□□□ 0.01
EXTL3O43909 AL356740.1-201ENST00000602192 1297 ntBASIC15.13■□□□□ 0.01
EXTL3O43909 AC073548.1-201ENST00000624088 1882 ntBASIC15.13■□□□□ 0.01
EXTL3O43909 AC020763.3-201ENST00000625095 2904 ntBASIC15.13■□□□□ 0.01
EXTL3O43909 TBC1D24-207ENST00000627285 4382 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
EXTL3O43909 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 UGP2-207ENST00000467648 2057 ntTSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 RBP1-203ENST00000483943 1935 ntTSL 2 BASIC15.13■□□□□ 0.01
EXTL3O43909 SPDYA-202ENST00000379579 1759 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 NIPSNAP3A-201ENST00000374767 1633 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 SPTLC2-201ENST00000216484 8170 ntAPPRIS P1 TSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 AC074138.1-201ENST00000611182 1303 ntBASIC15.13■□□□□ 0.01
EXTL3O43909 KRBA2-202ENST00000396267 2562 ntTSL 2 BASIC15.13■□□□□ 0.01
EXTL3O43909 ATG13-215ENST00000529655 2566 ntAPPRIS P1 TSL 2 BASIC15.13■□□□□ 0.01
EXTL3O43909 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC15.13■□□□□ 0.01
EXTL3O43909 PLXNB1-204ENST00000456774 5859 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 C17orf53-201ENST00000245382 2272 ntAPPRIS ALT2 TSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 MRC2-202ENST00000446119 3201 ntTSL 2 BASIC15.13■□□□□ 0.01
EXTL3O43909 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC15.13■□□□□ 0.01
EXTL3O43909 INF2-203ENST00000392634 4672 ntAPPRIS P3 TSL 5 BASIC15.13■□□□□ 0.01
EXTL3O43909 E2F3-201ENST00000346618 4749 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
EXTL3O43909 IMMT-212ENST00000620815 1520 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EXTL3O43909 ZNF516-201ENST00000443185 8118 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EXTL3O43909 POLR1C-203ENST00000372389 1355 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EXTL3O43909 RIC8B-202ENST00000392837 5135 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
EXTL3O43909 OSGIN1-201ENST00000343939 2391 ntTSL 2 BASIC15.12■□□□□ 0.01
EXTL3O43909 TRDMT1-203ENST00000377799 3527 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EXTL3O43909 CYLD-202ENST00000398568 3536 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EXTL3O43909 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC15.12■□□□□ 0.01
EXTL3O43909 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC15.12■□□□□ 0.01
EXTL3O43909 CWC27-201ENST00000381070 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EXTL3O43909 CCDC169-SOHLH2-201ENST00000511166 2051 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
EXTL3O43909 TTC28-AS1-212ENST00000433317 3080 ntTSL 5 BASIC15.12■□□□□ 0.01
EXTL3O43909 AC009133.1-201ENST00000569981 2449 ntTSL 2 BASIC15.12■□□□□ 0.01
EXTL3O43909 CFAP52-202ENST00000396219 1912 ntTSL 2 BASIC15.12■□□□□ 0.01
EXTL3O43909 Z98885.3-201ENST00000624882 1757 ntBASIC15.12■□□□□ 0.01
EXTL3O43909 PDE6G-201ENST00000331056 1029 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EXTL3O43909 STX1A-202ENST00000395154 1022 ntTSL 3 BASIC15.12■□□□□ 0.01
EXTL3O43909 TP53I3-203ENST00000407482 747 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EXTL3O43909 MOCS1-207ENST00000432280 1071 ntTSL 5 BASIC15.12■□□□□ 0.01
EXTL3O43909 AC093151.3-202ENST00000445073 709 ntTSL 3 BASIC15.12■□□□□ 0.01
EXTL3O43909 SOX9-AS1-207ENST00000446332 443 ntTSL 2 BASIC15.12■□□□□ 0.01
EXTL3O43909 EFCAB10-201ENST00000460135 717 ntTSL 2 BASIC15.12■□□□□ 0.01
EXTL3O43909 RN7SL564P-201ENST00000496309 250 ntBASIC15.12■□□□□ 0.01
EXTL3O43909 AC069185.1-202ENST00000533405 471 ntTSL 3 BASIC15.12■□□□□ 0.01
EXTL3O43909 LINC02369-202ENST00000540745 801 ntTSL 5 BASIC15.12■□□□□ 0.01
EXTL3O43909 LINC01475-201ENST00000548010 766 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EXTL3O43909 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC15.12■□□□□ 0.01
EXTL3O43909 AC090825.1-202ENST00000560059 665 ntTSL 3 BASIC15.12■□□□□ 0.01
EXTL3O43909 AC135782.3-201ENST00000562782 2105 ntBASIC15.12■□□□□ 0.01
EXTL3O43909 SNORD3B-1-201ENST00000577988 758 ntBASIC15.12■□□□□ 0.01
EXTL3O43909 GAS7-216ENST00000583882 553 ntTSL 5 BASIC15.12■□□□□ 0.01
EXTL3O43909 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EXTL3O43909 ANO10-205ENST00000414522 2450 ntTSL 2 BASIC15.12■□□□□ 0.01
EXTL3O43909 POLG-201ENST00000268124 4500 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EXTL3O43909 AL359845.1-201ENST00000458202 1648 ntBASIC15.12■□□□□ 0.01
EXTL3O43909 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
EXTL3O43909 PTPN9-201ENST00000306726 3862 ntAPPRIS ALT2 TSL 5 BASIC15.12■□□□□ 0.01
EXTL3O43909 GGA1-201ENST00000325180 2528 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EXTL3O43909 PRF1-202ENST00000441259 2533 ntAPPRIS P1 TSL 5 BASIC15.12■□□□□ 0.01
EXTL3O43909 LSS-211ENST00000522411 2523 ntTSL 2 BASIC15.12■□□□□ 0.01
EXTL3O43909 PDE2A-203ENST00000418754 2855 ntTSL 2 BASIC15.12■□□□□ 0.01
EXTL3O43909 KLHL32-206ENST00000544166 2864 ntTSL 2 BASIC15.12■□□□□ 0.01
EXTL3O43909 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
EXTL3O43909 B3GAT2-201ENST00000230053 6565 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EXTL3O43909 RFX8-201ENST00000428343 1686 ntAPPRIS P1 TSL 2 BASIC15.12■□□□□ 0.01
EXTL3O43909 RHOG-201ENST00000351018 1319 ntAPPRIS P1 TSL 1 (best) BASIC15.12■□□□□ 0.01
EXTL3O43909 TMPRSS3-202ENST00000398397 1342 ntTSL 1 (best) BASIC15.12■□□□□ 0.01
EXTL3O43909 XKRX-202ENST00000468904 2249 ntTSL 2 BASIC15.12■□□□□ 0.01
Retrieved 100 of 98,524 protein–RNA pairs in 55.7 ms