Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 AC005041.3-201ENST00000606287 649 ntBASIC14.12□□□□□ -0.15
KDELR3O43731 CDH16-209ENST00000570262 2604 ntTSL 5 BASIC14.12□□□□□ -0.15
KDELR3O43731 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC14.12□□□□□ -0.15
KDELR3O43731 LRRFIP1-202ENST00000289175 3709 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KDELR3O43731 CRYM-202ENST00000543948 1400 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
KDELR3O43731 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
KDELR3O43731 MECP2-217ENST00000628176 1712 ntTSL 3 BASIC14.12□□□□□ -0.15
KDELR3O43731 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC14.12□□□□□ -0.15
KDELR3O43731 RDH12-203ENST00000551171 1879 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KDELR3O43731 ZNF821-214ENST00000565601 1858 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
KDELR3O43731 COQ3-201ENST00000254759 1335 ntAPPRIS P1 TSL 1 (best) BASIC14.12□□□□□ -0.15
KDELR3O43731 SERHL-201ENST00000359906 1346 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KDELR3O43731 TSPAN3-205ENST00000558745 1340 ntTSL 5 BASIC14.12□□□□□ -0.15
KDELR3O43731 MED4-201ENST00000258648 2022 ntAPPRIS P3 TSL 1 (best) BASIC14.12□□□□□ -0.15
KDELR3O43731 SEZ6L-206ENST00000404234 3444 ntAPPRIS ALT2 TSL 1 (best) BASIC14.12□□□□□ -0.15
KDELR3O43731 DLGAP1-202ENST00000400145 2188 ntTSL 1 (best) BASIC14.12□□□□□ -0.15
KDELR3O43731 CAPN14-202ENST00000403897 2197 ntAPPRIS P1 TSL 2 BASIC14.12□□□□□ -0.15
KDELR3O43731 CCDC51-206ENST00000447018 1461 ntTSL 2 BASIC14.12□□□□□ -0.15
KDELR3O43731 KIF3C-202ENST00000405914 3180 ntAPPRIS P1 TSL 5 BASIC14.12□□□□□ -0.15
KDELR3O43731 MAP3K4-204ENST00000392142 5490 ntAPPRIS P4 TSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 INPPL1-213ENST00000541756 4649 ntTSL 5 BASIC14.11□□□□□ -0.15
KDELR3O43731 KYAT1-201ENST00000302586 1903 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 NDRG4-217ENST00000562999 2931 ntTSL 5 BASIC14.11□□□□□ -0.15
KDELR3O43731 RGMA-202ENST00000425933 3078 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
KDELR3O43731 SLC43A3-214ENST00000529554 2207 ntAPPRIS P3 TSL 2 BASIC14.11□□□□□ -0.15
KDELR3O43731 PSIP1-204ENST00000380738 3364 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 SSTR1-201ENST00000267377 4295 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
KDELR3O43731 PPP1R32-201ENST00000338608 1535 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
KDELR3O43731 KCP-206ENST00000613019 4853 ntAPPRIS P5 TSL 5 BASIC14.11□□□□□ -0.15
KDELR3O43731 RAB40A-201ENST00000304236 1969 ntAPPRIS P1 TSL 2 BASIC14.11□□□□□ -0.15
KDELR3O43731 CALCOCO1-218ENST00000550804 2291 ntAPPRIS P2 TSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 RAD17-207ENST00000361732 3002 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 CRCP-203ENST00000395326 3009 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 ADAM33-207ENST00000619289 3195 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 ST20-AS1-201ENST00000560255 4223 ntBASIC14.11□□□□□ -0.15
KDELR3O43731 CPPED1-201ENST00000261660 1898 ntTSL 2 BASIC14.11□□□□□ -0.15
KDELR3O43731 PGD-201ENST00000270776 1885 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 TNNT2-203ENST00000367315 1083 ntAPPRIS ALT2 TSL 5 BASIC14.11□□□□□ -0.15
KDELR3O43731 EDN1-201ENST00000379375 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 TMEM219-202ENST00000414689 1024 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 AL021707.5-201ENST00000420118 461 ntTSL 5 BASIC14.11□□□□□ -0.15
KDELR3O43731 GDAP1-202ENST00000434412 1228 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 FKBP2-203ENST00000449942 613 ntAPPRIS P1 TSL 5 BASIC14.11□□□□□ -0.15
KDELR3O43731 Z84485.1-202ENST00000499560 1230 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 IGHV1-12-201ENST00000518307 205 ntBASIC14.11□□□□□ -0.15
KDELR3O43731 AC008050.1-201ENST00000554926 632 ntTSL 3 BASIC14.11□□□□□ -0.15
KDELR3O43731 BATF-202ENST00000555504 361 ntTSL 2 BASIC14.11□□□□□ -0.15
KDELR3O43731 AC092139.2-201ENST00000563750 754 ntTSL 3 BASIC14.11□□□□□ -0.15
KDELR3O43731 TMEM219-204ENST00000566848 1292 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 AC068152.1-205ENST00000575173 1081 ntTSL 3 BASIC14.11□□□□□ -0.15
KDELR3O43731 RN7SL357P-201ENST00000581065 298 ntBASIC14.11□□□□□ -0.15
KDELR3O43731 LINC02538-201ENST00000609107 4569 ntTSL 2 BASIC14.11□□□□□ -0.15
KDELR3O43731 SLC12A5-219ENST00000628272 401 ntTSL 3 BASIC14.11□□□□□ -0.15
KDELR3O43731 YIPF1-201ENST00000072644 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 SCN3B-201ENST00000299333 5665 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 AC015712.6-201ENST00000431060 5068 ntTSL 2 BASIC14.11□□□□□ -0.15
KDELR3O43731 VRK3-201ENST00000316763 1938 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 MANEAL-201ENST00000329006 1930 ntTSL 2 BASIC14.11□□□□□ -0.15
KDELR3O43731 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 LIG1-202ENST00000427526 3027 ntAPPRIS ALT2 TSL 2 BASIC14.11□□□□□ -0.15
KDELR3O43731 MAGEH1-201ENST00000342972 1462 ntAPPRIS P1 BASIC14.11□□□□□ -0.15
KDELR3O43731 IQCJ-201ENST00000397832 1460 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 TOP3B-201ENST00000357179 2863 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 UQCC2-204ENST00000607484 1314 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 CALM1-216ENST00000626705 1341 ntTSL 5 BASIC14.11□□□□□ -0.15
KDELR3O43731 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 H6PD-203ENST00000602477 5590 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 TLN2-202ENST00000472902 2116 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 PLCB1-218ENST00000629992 3095 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 TRIB2-201ENST00000155926 4391 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 SYBU-217ENST00000528331 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC14.11□□□□□ -0.15
KDELR3O43731 MSI1-201ENST00000257552 2975 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KDELR3O43731 RPRD1A-202ENST00000399022 4438 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KDELR3O43731 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC14.1□□□□□ -0.15
KDELR3O43731 SHROOM1-203ENST00000378679 4019 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
KDELR3O43731 HSP90AA1-201ENST00000216281 3379 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KDELR3O43731 CSF3-204ENST00000394149 1583 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
KDELR3O43731 AC009474.1-201ENST00000455096 1565 ntBASIC14.1□□□□□ -0.15
KDELR3O43731 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC14.1□□□□□ -0.15
KDELR3O43731 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
KDELR3O43731 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.1□□□□□ -0.15
KDELR3O43731 ENO2-201ENST00000229277 2423 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KDELR3O43731 PAPD7-207ENST00000631941 1902 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
KDELR3O43731 AC117503.4-201ENST00000623229 1418 ntBASIC14.1□□□□□ -0.15
KDELR3O43731 FAAP100-201ENST00000327787 3627 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KDELR3O43731 SPEG-201ENST00000312358 10782 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
KDELR3O43731 GON7-201ENST00000306954 1154 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KDELR3O43731 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
KDELR3O43731 APOD-201ENST00000343267 1130 ntAPPRIS P2 TSL 1 (best) BASIC14.1□□□□□ -0.15
KDELR3O43731 MYL3-202ENST00000395869 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KDELR3O43731 TRO-205ENST00000399736 1115 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
KDELR3O43731 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
KDELR3O43731 AL022332.1-202ENST00000432495 426 ntTSL 3 BASIC14.1□□□□□ -0.15
KDELR3O43731 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14.1□□□□□ -0.15
KDELR3O43731 AC025186.1-201ENST00000478174 870 ntBASIC14.1□□□□□ -0.15
KDELR3O43731 PGAP2-224ENST00000490830 810 ntTSL 3 BASIC14.1□□□□□ -0.15
KDELR3O43731 AC105389.3-201ENST00000508038 907 ntTSL 5 BASIC14.1□□□□□ -0.15
KDELR3O43731 AC093300.1-201ENST00000510368 1201 ntBASIC14.1□□□□□ -0.15
Retrieved 100 of 98,524 protein–RNA pairs in 36.9 ms