Protein–RNA interactions for Protein: A8K830

COLCA2, Colorectal cancer-associated protein 2, humanhuman

Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COLCA2A8K830 PDE9A-210ENST00000398229 1684 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
COLCA2A8K830 WASH2P-201ENST00000453662 1684 ntBASIC10.62□□□□□ -0.71
COLCA2A8K830 EGR3-201ENST00000317216 4336 ntAPPRIS P3 TSL 1 (best) BASIC10.62□□□□□ -0.71
COLCA2A8K830 ABI1-203ENST00000376137 3467 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
COLCA2A8K830 YEATS2-201ENST00000305135 6506 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
COLCA2A8K830 GATB-209ENST00000512306 1519 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
COLCA2A8K830 RTL10-202ENST00000405640 6785 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
COLCA2A8K830 LCMT1-AS2-201ENST00000562280 2601 ntTSL 2 BASIC10.62□□□□□ -0.71
COLCA2A8K830 SLC6A12-201ENST00000359674 3165 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
COLCA2A8K830 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC10.62□□□□□ -0.71
COLCA2A8K830 FLT4-201ENST00000261937 5857 ntAPPRIS P1 TSL 1 (best) BASIC10.62□□□□□ -0.71
COLCA2A8K830 USP47-202ENST00000339865 7775 ntTSL 2 BASIC10.62□□□□□ -0.71
COLCA2A8K830 LONP2-203ENST00000535754 2580 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
COLCA2A8K830 WDR83OS-202ENST00000596731 2562 ntAPPRIS P2 TSL 1 (best) BASIC10.62□□□□□ -0.71
COLCA2A8K830 CCNE1-202ENST00000357943 1641 ntTSL 1 (best) BASIC10.62□□□□□ -0.71
COLCA2A8K830 AC022384.1-202ENST00000450534 2831 ntAPPRIS ALT2 TSL 2 BASIC10.62□□□□□ -0.71
COLCA2A8K830 BSDC1-203ENST00000419121 1473 ntTSL 2 BASIC10.61□□□□□ -0.71
COLCA2A8K830 METAP2-205ENST00000546753 1862 ntTSL 2 BASIC10.61□□□□□ -0.71
COLCA2A8K830 INO80-211ENST00000616814 4272 ntTSL 5 BASIC10.61□□□□□ -0.71
COLCA2A8K830 LVRN-202ENST00000395528 4544 ntTSL 5 BASIC10.61□□□□□ -0.71
COLCA2A8K830 TXNDC2-204ENST00000536353 1703 ntTSL 5 BASIC10.61□□□□□ -0.71
COLCA2A8K830 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
COLCA2A8K830 AC004494.1-201ENST00000613210 2775 ntBASIC10.61□□□□□ -0.71
COLCA2A8K830 TRPC3-205ENST00000513531 2382 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
COLCA2A8K830 RP2-201ENST00000218340 3803 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
COLCA2A8K830 GOT2-201ENST00000245206 2462 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
COLCA2A8K830 VSTM4-202ENST00000332853 6392 ntAPPRIS ALT2 TSL 1 (best) BASIC10.61□□□□□ -0.71
COLCA2A8K830 OPRK1-206ENST00000613482 4682 ntTSL 5 BASIC10.61□□□□□ -0.71
COLCA2A8K830 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC10.61□□□□□ -0.71
COLCA2A8K830 GK-204ENST00000378945 2063 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
COLCA2A8K830 PIGH-201ENST00000216452 1420 ntAPPRIS P2 TSL 1 (best) BASIC10.61□□□□□ -0.71
COLCA2A8K830 TRAF3IP3-202ENST00000367024 2331 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
COLCA2A8K830 RNF24-202ENST00000358395 3242 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
COLCA2A8K830 FERMT1-204ENST00000536936 3229 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
COLCA2A8K830 AC007622.2-202ENST00000546714 1680 ntTSL 2 BASIC10.61□□□□□ -0.71
COLCA2A8K830 WNT5A-201ENST00000264634 6176 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
COLCA2A8K830 RIMS1-201ENST00000264839 7055 ntTSL 5 BASIC10.61□□□□□ -0.71
COLCA2A8K830 BAIAP2-AS1-202ENST00000577066 4465 ntTSL 2 BASIC10.61□□□□□ -0.71
COLCA2A8K830 TMEM147-201ENST00000222284 899 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
COLCA2A8K830 STMN1-201ENST00000357865 1137 ntAPPRIS P1 TSL 2 BASIC10.61□□□□□ -0.71
COLCA2A8K830 ATP1A1-AS1-202ENST00000369492 1011 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
COLCA2A8K830 RBM39-205ENST00000397370 612 ntTSL 2 BASIC10.61□□□□□ -0.71
COLCA2A8K830 IGLL3P-201ENST00000412472 434 ntBASIC10.61□□□□□ -0.71
COLCA2A8K830 RMDN1-202ENST00000430676 1106 ntTSL 2 BASIC10.61□□□□□ -0.71
COLCA2A8K830 AC005076.1-201ENST00000433446 769 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
COLCA2A8K830 TTC28-AS1-213ENST00000434221 972 ntTSL 3 BASIC10.61□□□□□ -0.71
COLCA2A8K830 RHOQP3-201ENST00000437982 621 ntBASIC10.61□□□□□ -0.71
COLCA2A8K830 HCG2040054-202ENST00000439182 362 ntTSL 3 BASIC10.61□□□□□ -0.71
COLCA2A8K830 RNASEK-C17orf49-201ENST00000547302 900 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
COLCA2A8K830 C17orf49-209ENST00000552775 779 ntTSL 5 BASIC10.61□□□□□ -0.71
COLCA2A8K830 DNM1P51-201ENST00000558149 522 ntBASIC10.61□□□□□ -0.71
COLCA2A8K830 EMC9-206ENST00000560403 872 ntTSL 2 BASIC10.61□□□□□ -0.71
COLCA2A8K830 AOC2-201ENST00000253799 2657 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
COLCA2A8K830 NIT1-204ENST00000392190 1518 ntAPPRIS ALT1 TSL 3 BASIC10.61□□□□□ -0.71
COLCA2A8K830 AFG3L2P1-201ENST00000521792 1763 ntBASIC10.61□□□□□ -0.71
COLCA2A8K830 ST6GAL1-215ENST00000457772 3947 ntTSL 5 BASIC10.61□□□□□ -0.71
COLCA2A8K830 PRIMPOL-201ENST00000314970 2289 ntAPPRIS P3 TSL 1 (best) BASIC10.61□□□□□ -0.71
COLCA2A8K830 DDR1-226ENST00000376569 3783 ntAPPRIS P3 TSL 5 BASIC10.61□□□□□ -0.71
COLCA2A8K830 NRXN1-233ENST00000630543 4500 ntTSL 5 BASIC10.61□□□□□ -0.71
COLCA2A8K830 GOLGA6L2-201ENST00000312015 1379 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
COLCA2A8K830 NLGN3-205ENST00000536169 3863 ntAPPRIS ALT1 TSL 5 BASIC10.61□□□□□ -0.71
COLCA2A8K830 ETFBKMT-205ENST00000538463 1862 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
COLCA2A8K830 PMEL-215ENST00000550464 1867 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
COLCA2A8K830 ZNF730-202ENST00000597761 2374 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
COLCA2A8K830 AP002008.2-201ENST00000635926 4870 ntBASIC10.61□□□□□ -0.71
COLCA2A8K830 MAP3K9-204ENST00000554146 2982 ntTSL 2 BASIC10.61□□□□□ -0.71
COLCA2A8K830 NBPF1-203ENST00000430580 5932 ntAPPRIS P5 TSL 5 BASIC10.61□□□□□ -0.71
COLCA2A8K830 SLC25A24-203ENST00000565488 4271 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
COLCA2A8K830 MARK3-201ENST00000216288 2911 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
COLCA2A8K830 GPSM2-202ENST00000406462 7433 ntAPPRIS P1 TSL 5 BASIC10.61□□□□□ -0.71
COLCA2A8K830 ZNF277-201ENST00000361822 1849 ntAPPRIS P1 TSL 1 (best) BASIC10.61□□□□□ -0.71
COLCA2A8K830 APOBEC3B-203ENST00000402182 1844 ntAPPRIS ALT2 TSL 2 BASIC10.61□□□□□ -0.71
COLCA2A8K830 AAMP-204ENST00000444053 1804 ntAPPRIS ALT1 TSL 1 (best) BASIC10.61□□□□□ -0.71
COLCA2A8K830 PAAF1-215ENST00000544909 1802 ntTSL 1 (best) BASIC10.61□□□□□ -0.71
COLCA2A8K830 ASB7-201ENST00000332783 4985 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
COLCA2A8K830 MRFAP1-202ENST00000382581 1584 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
COLCA2A8K830 PVR-204ENST00000406449 1344 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
COLCA2A8K830 NCBP1-202ENST00000375147 5178 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
COLCA2A8K830 SLCO2A1-208ENST00000493729 1918 ntTSL 5 BASIC10.6□□□□□ -0.71
COLCA2A8K830 TRIM32-203ENST00000450136 3717 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
COLCA2A8K830 INMT-MINDY4-202ENST00000458257 2877 ntAPPRIS P5 TSL 2 BASIC10.6□□□□□ -0.71
COLCA2A8K830 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC10.6□□□□□ -0.71
COLCA2A8K830 TTC39B-202ENST00000380850 3221 ntAPPRIS ALT2 TSL 2 BASIC10.6□□□□□ -0.71
COLCA2A8K830 TOMM22-201ENST00000216034 2040 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
COLCA2A8K830 DDX39B-214ENST00000458640 2003 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
COLCA2A8K830 HARS-202ENST00000415192 1401 ntTSL 2 BASIC10.6□□□□□ -0.71
COLCA2A8K830 RAD52-204ENST00000430095 2366 ntAPPRIS P3 TSL 1 (best) BASIC10.6□□□□□ -0.71
COLCA2A8K830 TIA1-206ENST00000445587 1440 ntTSL 5 BASIC10.6□□□□□ -0.71
COLCA2A8K830 AC008966.1-201ENST00000502171 2367 ntTSL 2 BASIC10.6□□□□□ -0.71
COLCA2A8K830 PPP1R26P5-201ENST00000416640 3664 ntBASIC10.6□□□□□ -0.71
COLCA2A8K830 ARHGAP27-212ENST00000532038 3694 ntAPPRIS ALT2 TSL 5 BASIC10.6□□□□□ -0.71
COLCA2A8K830 ENO1-201ENST00000234590 1783 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
COLCA2A8K830 CAMK2A-201ENST00000348628 5322 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
COLCA2A8K830 SMARCA5-201ENST00000283131 7923 ntAPPRIS P1 TSL 1 (best) BASIC10.6□□□□□ -0.71
COLCA2A8K830 EZR-201ENST00000337147 3068 ntAPPRIS P2 TSL 1 (best) BASIC10.6□□□□□ -0.71
COLCA2A8K830 ICOSLG-201ENST00000344330 1009 ntAPPRIS ALT2 TSL 1 (best) BASIC10.6□□□□□ -0.71
COLCA2A8K830 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC10.6□□□□□ -0.71
COLCA2A8K830 MIR718-201ENST00000390190 70 ntBASIC10.6□□□□□ -0.71
COLCA2A8K830 CYB5A-203ENST00000397914 619 ntTSL 3 BASIC10.6□□□□□ -0.71
COLCA2A8K830 RN7SKP297-201ENST00000411270 282 ntBASIC10.6□□□□□ -0.71
Retrieved 100 of 98,524 protein–RNA pairs in 61.2 ms