Protein–RNA interactions for Protein: A6NKF7

TMEM88B, Transmembrane protein 88B, humanhuman

Predictions only

Length 163 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM88BA6NKF7 ALOX12B-201ENST00000319144 2502 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 ENDOV-212ENST00000520284 2500 ntTSL 2 BASIC15.82■□□□□ 0.12
TMEM88BA6NKF7 CHPF2-204ENST00000495645 2709 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 PBX3-207ENST00000447726 2789 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 KIAA1147-202ENST00000536163 7296 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 PPIL6-207ENST00000521072 4128 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 UNKL-201ENST00000248104 4320 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 BMP3-201ENST00000282701 5734 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 FUCA2-201ENST00000002165 2356 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 YY1AP1-201ENST00000295566 2626 ntAPPRIS P4 TSL 2 BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 ENO3-201ENST00000323997 1521 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 MOV10L1-202ENST00000354853 1701 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 COQ8A-202ENST00000366778 2743 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 SMAP1-202ENST00000370452 2491 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 MAP7D1-204ENST00000373151 3324 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 ITSN1-205ENST00000381291 5437 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 KDM6A-202ENST00000382899 5789 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 GAL3ST4-202ENST00000411994 1404 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 CLEC10A-202ENST00000416562 1646 ntAPPRIS ALT2 TSL 5 BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 AL512444.1-201ENST00000419644 480 ntTSL 2 BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 GRP-202ENST00000420468 579 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 SSFA2-205ENST00000431877 5150 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 SATB2-AS1-202ENST00000441234 468 ntTSL 3 BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 MOG-229ENST00000483013 279 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 MOG-232ENST00000490427 327 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 SUCLG2-204ENST00000493112 1516 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 AC025171.1-202ENST00000499871 2271 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 SPATA24-204ENST00000507779 606 ntTSL 5 BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 NEK11-205ENST00000507910 1841 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 BMF-209ENST00000561282 747 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 RN7SL322P-201ENST00000583519 299 ntBASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 CCDC159-209ENST00000588790 1408 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 ZNF114-204ENST00000595607 2478 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 SOX2-OT-228ENST00000597828 864 ntTSL 5 BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 AC211476.2-201ENST00000608799 708 ntBASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 NOMO1-207ENST00000610363 3765 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 AC018529.2-202ENST00000611482 3087 ntBASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 GABRB3-215ENST00000622697 5876 ntTSL 5 BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 LINC00694-204ENST00000637612 1059 ntAPPRIS P1 TSL 5 BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 PCDHB13-201ENST00000341948 5061 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 PACS1-201ENST00000320580 4392 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 PXYLP1-201ENST00000286353 3281 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 PDE1C-201ENST00000321453 2898 ntAPPRIS ALT1 TSL 2 BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 C2orf68-201ENST00000306336 2837 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
TMEM88BA6NKF7 NDUFA11-202ENST00000418389 2406 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 FOXP1-218ENST00000498215 2400 ntAPPRIS P3 TSL 2 BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 TBC1D3G-201ENST00000569055 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 TBC1D3H-201ENST00000610350 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 TBC1D3L-202ENST00000617678 2065 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 UAP1L1-202ENST00000409858 3365 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 NFATC4-222ENST00000555590 2830 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 BSDC1-209ENST00000526031 1361 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 AC034205.3-201ENST00000603595 1376 ntBASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 HS6ST2-204ENST00000521489 2607 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 MBOAT2-201ENST00000305997 7751 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 SCYL1-208ENST00000527009 2586 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 ZNF385C-205ENST00000618554 2596 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 ROPN1B-201ENST00000251776 1026 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 AC084149.2-201ENST00000438443 797 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 PGAM5-202ENST00000454808 1084 ntTSL 3 BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 RN7SL16P-201ENST00000476316 269 ntBASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 LIAS-205ENST00000509519 1005 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 SCOC-209ENST00000512749 841 ntAPPRIS ALT1 TSL 3 BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 AC078925.1-201ENST00000535370 568 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 AL353708.1-201ENST00000567904 1257 ntBASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 SNRPD2-203ENST00000585392 379 ntTSL 3 BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 FDPS-220ENST00000611010 1196 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 RN7SL341P-201ENST00000613745 298 ntBASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 TNNI2-206ENST00000617947 699 ntAPPRIS ALT1 TSL 5 BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 AL669831.3-208ENST00000634337 891 ntTSL 5 BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 DLGAP1-213ENST00000534970 2365 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 PIP5K1A-202ENST00000368888 2134 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 ZNF79-201ENST00000342483 2078 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 ALDH1A2-201ENST00000249750 4098 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 RCAN3-202ENST00000374395 6802 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 BCAR1-206ENST00000535626 2894 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 ASH2L-212ENST00000545394 2808 ntTSL 2 BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 SEMA4D-204ENST00000420101 1837 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 KLHL26-201ENST00000300976 4407 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
TMEM88BA6NKF7 ANAPC5-201ENST00000261819 2513 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 TBC1D3P5-202ENST00000581469 2513 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 GLOD4-203ENST00000536578 2497 ntTSL 5 BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 HOPX-202ENST00000337881 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 PLAT-211ENST00000524009 1613 ntTSL 2 BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 FGFR4-201ENST00000292408 3122 ntAPPRIS P4 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 PMM2-201ENST00000268261 2313 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 REC8-209ENST00000611366 2331 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 KEAP1-201ENST00000171111 2955 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 ADCK1-201ENST00000238561 2234 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 HTR3A-203ENST00000375498 2235 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 MKRN7P-201ENST00000433469 1371 ntBASIC15.79■□□□□ 0.12
TMEM88BA6NKF7 CPEB2-209ENST00000538197 6878 ntAPPRIS P4 TSL 5 BASIC15.79■□□□□ 0.12
Retrieved 100 of 98,524 protein–RNA pairs in 40.3 ms