Protein–RNA interactions for Protein: Q9HCM3

KIAA1549, UPF0606 protein KIAA1549, humanhuman

Predictions only

Length 1,950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KIAA1549Q9HCM3 AC148477.2-201ENST00000537762 3039 ntTSL 3 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 SNAPC4-201ENST00000298532 5010 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 TRBV4-1-201ENST00000390357 373 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 TRBV4-2-201ENST00000390392 455 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 CFL1P6-201ENST00000400899 494 ntBASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 ORMDL1-204ENST00000409519 1223 ntTSL 3 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 AP002856.2-201ENST00000416553 584 ntTSL 3 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 PSMD4P1-201ENST00000433951 1109 ntBASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 MIATNB-206ENST00000444388 918 ntTSL 3 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 LAMTOR4-209ENST00000488241 613 ntTSL 2 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 AC233724.6-201ENST00000503184 1088 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 AC093300.1-201ENST00000510368 1201 ntBASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 ORAOV1-209ENST00000538554 1000 ntTSL 2 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 ADSSL1-208ENST00000555674 520 ntTSL 3 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 AC012379.2-201ENST00000560237 765 ntTSL 2 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 AC010127.1-202ENST00000597623 713 ntTSL 2 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 CHD1-212ENST00000614616 8095 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 STX3-207ENST00000633708 3111 ntTSL 5 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 ADGRG2-207ENST00000379869 4768 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 FAM186B-201ENST00000257894 2944 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 AL672207.1-201ENST00000328462 1570 ntBASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 NYNRIN-201ENST00000382554 7857 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 CFAP36-204ENST00000406691 1575 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 ADGRG3-201ENST00000333493 2728 ntAPPRIS P3 TSL 1 (best) BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 MAP2K7-203ENST00000397983 3396 ntAPPRIS ALT1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 NUBPL-201ENST00000281081 3049 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 CCDC86-201ENST00000227520 1893 ntAPPRIS P2 TSL 1 (best) BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 ADAM17-204ENST00000618923 1881 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 AL772337.1-201ENST00000399186 2014 ntTSL 5 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 TMBIM4-202ENST00000358230 2952 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 ASS1-203ENST00000372393 1548 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
KIAA1549Q9HCM3 CDC20B-202ENST00000322374 1679 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 DDC-212ENST00000615193 1674 ntTSL 3 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 ZBTB7C-201ENST00000535628 4818 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 FCHO1-221ENST00000597512 2934 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 MRPL17-201ENST00000288937 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 TSEN2-202ENST00000402228 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 DSN1-204ENST00000426836 2441 ntAPPRIS P3 TSL 2 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 REC8-213ENST00000620473 2405 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 NTF3-202ENST00000423158 1336 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 SNCAIP-222ENST00000542191 2729 ntTSL 5 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 EFHD1-207ENST00000611312 1490 ntTSL 5 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 HSD3B2-206ENST00000543831 1783 ntAPPRIS P1 TSL 3 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 TUBB8-206ENST00000568584 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 NEO1-202ENST00000339362 7342 ntAPPRIS P3 TSL 5 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 RGS9-201ENST00000262406 2375 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 WDR46-231ENST00000374617 2358 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 LDHAL6A-201ENST00000280706 2526 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 MYADM-205ENST00000391771 3111 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 CT55-201ENST00000276241 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 HPGD-201ENST00000296521 1171 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 TNFSF13-203ENST00000380535 2195 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 SKOR2-201ENST00000400404 891 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 AAK1-202ENST00000409068 2606 ntTSL 2 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 EIF4E2-205ENST00000409394 604 ntTSL 3 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 CNRIP1-202ENST00000409559 644 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 MKRN2-202ENST00000411987 1436 ntTSL 2 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 GULOP-201ENST00000454030 748 ntBASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 RN7SL351P-201ENST00000469306 248 ntBASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 AP005264.6-204ENST00000588436 719 ntBASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 AC090004.1-201ENST00000608606 653 ntAPPRIS P1 TSL 5 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 AC002472.4-201ENST00000641915 272 ntBASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 ABCG1-203ENST00000361802 3034 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 HNRNPUL1-205ENST00000593587 2725 ntTSL 2 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 SIMC1-205ENST00000443967 3572 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 LINC02537-201ENST00000635943 1367 ntTSL 4 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 PPP1R12A-AS1-201ENST00000552885 3234 ntTSL 3 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 PRPS1-204ENST00000372435 2073 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 RMDN1-201ENST00000406452 3063 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 AC010327.5-201ENST00000586923 3061 ntBASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 AC093899.2-201ENST00000513963 1935 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 PSAP-202ENST00000394936 2872 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 GIPC2-201ENST00000370759 3847 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 KIAA0895L-202ENST00000561621 3500 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 AC004623.1-201ENST00000624592 2127 ntBASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 BRD3-201ENST00000303407 5652 ntAPPRIS P2 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 PROM2-203ENST00000403131 2922 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 AGAP12P-201ENST00000585227 2359 ntBASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 PPT1-213ENST00000641319 2388 ntBASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 F2-205ENST00000530231 1849 ntTSL 5 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 PRKCSH-212ENST00000591462 2209 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 S100A3-202ENST00000368713 856 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 FAM92A-202ENST00000423990 914 ntTSL 5 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 GCSHP3-201ENST00000431120 391 ntBASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 LINC00313-207ENST00000451543 413 ntTSL 3 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 AC079250.1-201ENST00000456046 531 ntBASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 AC022113.2-201ENST00000504935 704 ntTSL 3 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 NSD1-211ENST00000511258 809 ntTSL 3 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 DLK1-205ENST00000556051 469 ntTSL 2 BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 TGFB3-204ENST00000556285 1280 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
KIAA1549Q9HCM3 AC005357.2-202ENST00000590507 1060 ntBASIC12.29□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 51.9 ms