Protein–RNA interactions for Protein: Q9HCK8

CHD8, Chromodomain-helicase-DNA-binding protein 8, humanhuman

Predictions only

Length 2,581 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8Q9HCK8 UGDH-201ENST00000316423 3216 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 TLE3-215ENST00000559048 2918 ntTSL 2 BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 MKL1-213ENST00000620651 3757 ntTSL 5 BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 MAP2K7-202ENST00000397981 3430 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 DNAJB1-201ENST00000254322 2264 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 FOXP3-202ENST00000376199 2274 ntTSL 2 BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 WDR1-203ENST00000382452 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 CDKN2AIPNLP2-201ENST00000274516 352 ntBASIC12.58□□□□□ -0.4
CHD8Q9HCK8 TCEAL9-202ENST00000372661 1071 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 AC064836.1-201ENST00000405197 704 ntBASIC12.58□□□□□ -0.4
CHD8Q9HCK8 AL662797.1-201ENST00000442852 799 ntTSL 3 BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 TGFA-207ENST00000450929 950 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 ENTPD1-AS1-210ENST00000452942 864 ntTSL 3 BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 LAIR1-217ENST00000474878 814 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 IGKV1-8-201ENST00000495489 398 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 AC018362.2-202ENST00000567089 562 ntTSL 3 BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 ECI2-207ENST00000465828 1548 ntTSL 5 BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 SLC35E2-202ENST00000355439 2078 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 PFKFB4-201ENST00000232375 3586 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 TADA1-201ENST00000367874 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 C16orf54-201ENST00000329410 2585 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 CNP-201ENST00000393888 2583 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 SLC25A35-202ENST00000577745 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 JRK-203ENST00000571961 2687 ntAPPRIS ALT2 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 BPIFB1-201ENST00000253354 1727 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 CACNA1A-201ENST00000360228 8627 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 TRIB1-203ENST00000520847 1332 ntTSL 2 BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 CRHBP-201ENST00000274368 1980 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 AATBC-201ENST00000400385 4598 ntTSL 2 BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 PI4K2A-201ENST00000370631 4189 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 TRPC4AP-201ENST00000252015 3226 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 AC106799.1-201ENST00000503188 1676 ntTSL 2 BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 RCAN2-203ENST00000371374 3327 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 TMIGD1-201ENST00000328886 1201 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 PRSS3-203ENST00000379405 834 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 AC005822.1-201ENST00000414124 1034 ntBASIC12.58□□□□□ -0.4
CHD8Q9HCK8 TRBV22-1-201ENST00000424543 337 ntBASIC12.58□□□□□ -0.4
CHD8Q9HCK8 BNC2-207ENST00000471301 745 ntTSL 3 BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 FHIT-205ENST00000476844 1033 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 EGLN3-209ENST00000553215 1004 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 AP005121.2-201ENST00000583306 1101 ntBASIC12.58□□□□□ -0.4
CHD8Q9HCK8 AC010325.1-203ENST00000636757 380 ntAPPRIS P5 TSL 5 BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 C2orf50-201ENST00000381585 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 RAB23-202ENST00000468148 4837 ntAPPRIS P1 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 AC091980.2-201ENST00000619056 2775 ntAPPRIS P1 BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 CCDC42-201ENST00000293845 1374 ntAPPRIS P1 TSL 2 BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 NFKB2-203ENST00000369966 3101 ntAPPRIS P4 TSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 MYADML-201ENST00000474610 2147 ntBASIC12.58□□□□□ -0.4
CHD8Q9HCK8 NDRG2-226ENST00000554104 2146 ntTSL 1 (best) BASIC12.58□□□□□ -0.4
CHD8Q9HCK8 SLC25A22-201ENST00000320230 2796 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 TAP1-201ENST00000354258 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 HMBS-202ENST00000392841 1411 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 ADAMTSL1-207ENST00000380566 2321 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 RAB13-201ENST00000368575 1176 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 AL356653.1-201ENST00000402743 360 ntBASIC12.57□□□□□ -0.4
CHD8Q9HCK8 AC090095.1-201ENST00000519275 871 ntBASIC12.57□□□□□ -0.4
CHD8Q9HCK8 RPL38-206ENST00000533498 532 ntAPPRIS P2 TSL 2 BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 AC011603.2-203ENST00000547387 897 ntTSL 3 BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 C4B-AS1-205ENST00000415626 2095 ntTSL 2 BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 C4A-AS1-204ENST00000458633 2095 ntTSL 2 BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 SFSWAP-201ENST00000261674 3246 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 IQCD-201ENST00000299732 1369 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 SIN3A-203ENST00000394949 4930 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 KTN1-AS1-202ENST00000412224 2185 ntTSL 2 BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 CNOT9-201ENST00000273064 4079 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 SYT3-202ENST00000593901 2836 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 RASA3-201ENST00000334062 4191 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 KCNT1-202ENST00000371757 4717 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 MTRF1L-201ENST00000367230 3431 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 AC073585.1-201ENST00000368895 1328 ntBASIC12.57□□□□□ -0.4
CHD8Q9HCK8 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 CLEC18C-210ENST00000569347 1970 ntAPPRIS P2 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 FGGY-204ENST00000371218 2052 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 DDOST-201ENST00000375048 2079 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 ABLIM3-206ENST00000506113 4569 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 PCGF2-203ENST00000616129 1534 ntTSL 5 BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 U3.49-201ENST00000391065 214 ntBASIC12.57□□□□□ -0.4
CHD8Q9HCK8 LINC02026-202ENST00000414309 772 ntTSL 3 BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 AL450322.2-201ENST00000421629 759 ntTSL 3 BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 AP000346.2-201ENST00000430707 906 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 AL121656.1-201ENST00000440786 482 ntTSL 5 BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 PRAMEF35P-201ENST00000458709 891 ntBASIC12.57□□□□□ -0.4
CHD8Q9HCK8 CD81-209ENST00000492627 886 ntTSL 3 BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 KCCAT198-201ENST00000549251 549 ntTSL 4 BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 AFMID-205ENST00000586731 550 ntTSL 3 BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 AC020763.2-201ENST00000623155 1255 ntBASIC12.57□□□□□ -0.4
CHD8Q9HCK8 LINC01988-202ENST00000636975 921 ntTSL 5 BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 AL513478.3-201ENST00000641038 1095 ntBASIC12.57□□□□□ -0.4
CHD8Q9HCK8 LMBRD1-202ENST00000370577 2209 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 AC241585.2-201ENST00000578899 2307 ntTSL 1 (best) BASIC12.57□□□□□ -0.4
CHD8Q9HCK8 LMBR1-202ENST00000359422 4727 ntTSL 5 BASIC12.57□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 50.3 ms