Protein–RNA interactions for Protein: Q9BZI7

UPF3B, Regulator of nonsense transcripts 3B, humanhuman

Known RBP Predictions only

Length 483 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3BQ9BZI7 GFI1B-207ENST00000636137 1870 ntTSL 5 BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 ZFP36L2-201ENST00000282388 3696 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 SUGP2-214ENST00000600377 4752 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 APBB3-202ENST00000356738 1804 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 MAP7-202ENST00000432797 4375 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 C3orf22-201ENST00000318225 1000 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 CSH2-201ENST00000336844 1173 ntTSL 2 BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 CSH2-202ENST00000345366 598 ntTSL 5 BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 CSH2-203ENST00000392886 920 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 KRTAP10-13P-201ENST00000412914 571 ntBASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 LINC01665-201ENST00000422917 1241 ntTSL 1 (best) BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 CALR4P-201ENST00000431943 946 ntBASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 DGUOK-AS1-202ENST00000439192 563 ntTSL 2 BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 ARTN-209ENST00000479128 471 ntTSL 3 BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 AC005586.1-201ENST00000488310 577 ntTSL 4 BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 GOLGA2P8-201ENST00000505201 779 ntBASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 AP001258.2-201ENST00000529891 490 ntBASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 CSH2-206ENST00000560142 749 ntTSL 5 BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 AL031600.1-201ENST00000563610 570 ntTSL 4 BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 AC005498.2-204ENST00000590613 413 ntTSL 3 BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 ADAMTSL4-AS1-203ENST00000617352 1036 ntTSL 5 BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 ZNF341-202ENST00000375200 3579 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 SLC39A6-204ENST00000590986 3003 ntAPPRIS P3 TSL 5 BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 ABCB9-203ENST00000346530 3399 ntTSL 5 BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 STK3-201ENST00000419617 2826 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 AMER1-202ENST00000374869 3688 ntTSL 5 BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 PBRM1-204ENST00000394830 5071 ntAPPRIS P2 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 FOXP3-204ENST00000455775 2448 ntTSL 5 BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 CHMP7-202ENST00000397677 3403 ntAPPRIS P1 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 MAP3K21-202ENST00000366623 3910 ntAPPRIS ALT2 TSL 1 (best) BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 MAP7-205ENST00000544465 2744 ntAPPRIS ALT2 TSL 2 BASIC16.76■□□□□ 0.27
UPF3BQ9BZI7 B4GALT4-201ENST00000359213 2385 ntAPPRIS P1 TSL 2 BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 AL355102.3-201ENST00000554299 1678 ntBASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 GRM5-AS1-201ENST00000526448 4821 ntTSL 5 BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 TMCC2-201ENST00000329800 2818 ntTSL 2 BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 AL359643.2-201ENST00000606227 3273 ntTSL 2 BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 NFKB1-201ENST00000226574 4085 ntAPPRIS P3 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 STXBP6-202ENST00000396700 4021 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 KRT17P4-205ENST00000579946 2555 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 PDPK1-202ENST00000342085 7241 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 AC098936.1-201ENST00000442318 2885 ntTSL 2 BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 COX6A2-201ENST00000287490 440 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 HFE-201ENST00000309234 1158 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 PFDN6-204ENST00000395131 884 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 RPS9P1-201ENST00000419943 583 ntBASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 TSPY25P-201ENST00000429463 745 ntBASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 AC011742.3-201ENST00000439053 820 ntBASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 LINC00431-201ENST00000440735 1189 ntTSL 5 BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 APOPT1-207ENST00000477116 906 ntTSL 3 BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 SELENOW-201ENST00000509570 881 ntTSL 5 BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 WDYHV1-206ENST00000523356 869 ntTSL 3 BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 AL021546.1-201ENST00000551806 552 ntAPPRIS P1 TSL 3 BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 AC093752.3-201ENST00000567343 901 ntBASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 SKA2-205ENST00000580541 689 ntTSL 3 BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 AC243967.2-201ENST00000601409 567 ntTSL 4 BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 AL132994.2-201ENST00000603120 687 ntBASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 AL022328.3-201ENST00000607943 679 ntBASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 BTBD8-201ENST00000342818 1412 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 CENPL-202ENST00000356198 2357 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 CCND3-215ENST00000511642 2394 ntTSL 2 BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 AL356585.2-201ENST00000625078 2396 ntBASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 Z98885.2-201ENST00000565177 1567 ntTSL 2 BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 G3BP2-202ENST00000359707 4883 ntAPPRIS P4 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 SARS-202ENST00000369923 1882 ntTSL 5 BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 DSTN-203ENST00000474024 1853 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 DGCR8-201ENST00000351989 4514 ntAPPRIS P1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 PCDHGB7-202ENST00000612073 2785 ntAPPRIS ALT2 BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 AGER-201ENST00000375055 1369 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 PTK2-202ENST00000395218 4415 ntTSL 5 BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 RGS6-218ENST00000556437 1689 ntAPPRIS ALT1 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 AC093462.1-201ENST00000621167 1683 ntBASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 AL117190.1-201ENST00000637474 1985 ntTSL 5 BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 TBCE-207ENST00000543662 2117 ntAPPRIS ALT2 TSL 2 BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 CCDC138-203ENST00000412964 2250 ntAPPRIS ALT2 TSL 1 (best) BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 PAM-207ENST00000455264 2898 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 CYFIP2-219ENST00000616178 4210 ntTSL 1 (best) BASIC16.75■□□□□ 0.27
UPF3BQ9BZI7 SYNRG-217ENST00000612223 8229 ntAPPRIS P4 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 PHLDB2-203ENST00000412622 5996 ntTSL 5 BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 THSD4-201ENST00000261862 3133 ntTSL 5 BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 CALB1-201ENST00000265431 2533 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 OS9-218ENST00000551035 2246 ntTSL 2 BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 HERPUD1-203ENST00000379792 1782 ntTSL 5 BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 IZUMO1-201ENST00000332955 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 GNAI2-207ENST00000451956 1486 ntTSL 2 BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 SH2D7-202ENST00000409568 2162 ntTSL 5 BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 CD276-202ENST00000318443 3469 ntAPPRIS P2 TSL 2 BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 AC067931.2-201ENST00000623655 2003 ntBASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 Z82170.1-201ENST00000625081 3192 ntBASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 DCAF5-209ENST00000557386 2883 ntAPPRIS ALT1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 DRD3-203ENST00000460779 1557 ntAPPRIS P3 TSL 2 BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 IER3-201ENST00000259874 1244 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 RPS3-201ENST00000278572 907 ntTSL 3 BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 EIF4EBP3-201ENST00000310331 691 ntAPPRIS P1 TSL 1 (best) BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 FRMD3-202ENST00000328788 964 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 CFLAR-203ENST00000341222 1283 ntTSL 1 (best) BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 MAD2L2-206ENST00000376672 1002 ntTSL 3 BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 GAPDH-203ENST00000396858 1292 ntTSL 5 BASIC16.74■□□□□ 0.27
UPF3BQ9BZI7 DMKN-204ENST00000408915 600 ntAPPRIS ALT2 TSL 1 (best) BASIC16.74■□□□□ 0.27
Retrieved 100 of 98,524 protein–RNA pairs in 40.4 ms