Protein–RNA interactions for Protein: Q9BQI6

SLF1, SMC5-SMC6 complex localization factor protein 1, humanhuman

Predictions only

Length 1,058 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLF1Q9BQI6 GRIN1-206ENST00000371559 3577 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 PAX6-264ENST00000640125 1375 ntTSL 5 BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 ATE1-201ENST00000224652 4930 ntAPPRIS P5 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 RGS3-208ENST00000394646 2716 ntTSL 2 BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 KDELC2-201ENST00000323468 4312 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 RBM6-201ENST00000266022 3750 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 SNPH-203ENST00000614659 5354 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 GPR83-201ENST00000243673 4282 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 CAMKK2-202ENST00000337174 5304 ntAPPRIS ALT2 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 SHMT2-203ENST00000449049 2121 ntTSL 2 BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 MXD1-206ENST00000540449 5580 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 TNFRSF1A-202ENST00000366159 1339 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 CICP17-201ENST00000418553 2377 ntBASIC16.27■□□□□ 0.2
SLF1Q9BQI6 FBXL16-201ENST00000324361 3411 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 C8G-201ENST00000224181 855 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 MT1H-201ENST00000332374 397 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 TCEA3-201ENST00000374601 1197 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 OR52M2P-201ENST00000414298 959 ntBASIC16.27■□□□□ 0.2
SLF1Q9BQI6 TRPM2-AS-201ENST00000423310 586 ntTSL 1 (best) BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 AC019118.2-201ENST00000425776 718 ntTSL 5 BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 IZUMO1R-202ENST00000440961 805 ntAPPRIS ALT2 TSL 5 BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 AC253536.3-201ENST00000444093 558 ntTSL 3 BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 LINC00211-203ENST00000446799 662 ntTSL 3 BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 FAHD2CP-203ENST00000467292 965 ntTSL 2 BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 RN7SL375P-201ENST00000492442 298 ntBASIC16.27■□□□□ 0.2
SLF1Q9BQI6 EIF2B1-205ENST00000539951 848 ntTSL 5 BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 SOCS2-AS1-204ENST00000551626 618 ntTSL 4 BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 AC012645.2-201ENST00000566190 553 ntTSL 4 BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 AC011472.1-201ENST00000588634 569 ntTSL 4 BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 AC025048.2-201ENST00000590744 786 ntTSL 2 BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 TREX1-206ENST00000629913 945 ntAPPRIS P1 BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 AC027559.1-203ENST00000635726 517 ntTSL 5 BASIC16.27■□□□□ 0.2
SLF1Q9BQI6 APBA1-201ENST00000265381 6534 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLF1Q9BQI6 EPHB4-210ENST00000616502 3737 ntTSL 5 BASIC16.27■□□□□ 0.19
SLF1Q9BQI6 C9orf152-201ENST00000400613 2717 ntAPPRIS P1 TSL 1 (best) BASIC16.27■□□□□ 0.19
SLF1Q9BQI6 RIOK3-207ENST00000581585 1966 ntTSL 2 BASIC16.27■□□□□ 0.19
SLF1Q9BQI6 SMG9-211ENST00000601170 2387 ntTSL 2 BASIC16.27■□□□□ 0.19
SLF1Q9BQI6 LIPA-205ENST00000456827 2527 ntTSL 3 BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 SIGLEC16-202ENST00000602139 2510 ntTSL 5 BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 AL137784.3-201ENST00000623858 2288 ntBASIC16.26■□□□□ 0.19
SLF1Q9BQI6 PML-201ENST00000268058 4508 ntAPPRIS P4 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 ANO10-202ENST00000350459 2039 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 AL139158.3-201ENST00000641212 1562 ntBASIC16.26■□□□□ 0.19
SLF1Q9BQI6 RPS6KA4-201ENST00000334205 3119 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 NFE2L2-202ENST00000397063 2651 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 MED15-203ENST00000382974 2235 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 C12orf65-204ENST00000429587 1326 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 AKNA-206ENST00000374088 5464 ntAPPRIS P2 TSL 2 BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 AC021305.1-201ENST00000520656 1514 ntBASIC16.26■□□□□ 0.19
SLF1Q9BQI6 PHF14-201ENST00000403050 4276 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 SEC61B-201ENST00000223641 545 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 SLC19A1-201ENST00000311124 3811 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 CCL19-201ENST00000311925 687 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 CYB561D1-203ENST00000393709 620 ntAPPRIS ALT1 TSL 4 BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 ACTG1P19-201ENST00000418987 1116 ntBASIC16.26■□□□□ 0.19
SLF1Q9BQI6 CXorf40A-205ENST00000423540 1208 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 SLC5A4-AS1-201ENST00000434942 876 ntTSL 3 BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 AC091179.2-201ENST00000495536 532 ntTSL 3 BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 SEC61B-203ENST00000498603 587 ntTSL 3 BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 AC026310.2-201ENST00000546353 728 ntTSL 4 BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 GSTZ1-210ENST00000554279 795 ntTSL 2 BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 AC132825.4-202ENST00000578792 434 ntBASIC16.26■□□□□ 0.19
SLF1Q9BQI6 LINC02081-203ENST00000591384 867 ntTSL 3 BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 MTUS1-229ENST00000634613 1193 ntTSL 5 BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 NTRK2-201ENST00000277120 8633 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 RBPJ-206ENST00000361572 1697 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 SEPT9-220ENST00000588690 2919 ntTSL 5 BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 GOLGA8K-202ENST00000512626 1894 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 ZNF362-205ENST00000539719 3106 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 GOLGA8T-202ENST00000569052 1896 ntAPPRIS P1 TSL 5 BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 CCDC6-201ENST00000263102 5811 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 ARHGAP45-206ENST00000586866 4120 ntAPPRIS ALT2 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 LIPE-AS1-204ENST00000594624 1448 ntTSL 1 (best) BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 APBB3-201ENST00000354402 1810 ntTSL 5 BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 ACAD8-201ENST00000281182 2249 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 CCDC117-202ENST00000421503 3766 ntTSL 2 BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 RARG-203ENST00000425354 2959 ntAPPRIS P3 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 AC016397.2-201ENST00000624848 1985 ntBASIC16.26■□□□□ 0.19
SLF1Q9BQI6 SH3KBP1-205ENST00000397821 4731 ntAPPRIS P1 TSL 1 (best) BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 RPL18A-205ENST00000600147 1391 ntTSL 5 BASIC16.26■□□□□ 0.19
SLF1Q9BQI6 CDCA3-207ENST00000538862 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLF1Q9BQI6 CDC25B-205ENST00000439880 3096 ntAPPRIS ALT2 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLF1Q9BQI6 LRRK1-201ENST00000388948 7671 ntAPPRIS P1 TSL 5 BASIC16.25■□□□□ 0.19
SLF1Q9BQI6 PCDHGA3-203ENST00000619750 2695 ntAPPRIS ALT2 BASIC16.25■□□□□ 0.19
SLF1Q9BQI6 OSMR-201ENST00000274276 5539 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLF1Q9BQI6 SC5D-201ENST00000264027 2456 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLF1Q9BQI6 THBS4-201ENST00000350881 3222 ntAPPRIS P3 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLF1Q9BQI6 LAMA1-209ENST00000638611 1310 ntTSL 5 BASIC16.25■□□□□ 0.19
SLF1Q9BQI6 CDYL2-203ENST00000562812 2086 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SLF1Q9BQI6 CDYL2-204ENST00000563890 2086 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SLF1Q9BQI6 CDYL2-205ENST00000566173 2086 ntAPPRIS ALT2 TSL 5 BASIC16.25■□□□□ 0.19
SLF1Q9BQI6 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLF1Q9BQI6 INF2-209ENST00000617571 2956 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLF1Q9BQI6 MAPK12-203ENST00000395780 1459 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
SLF1Q9BQI6 AC020910.6-201ENST00000623084 1459 ntBASIC16.25■□□□□ 0.19
SLF1Q9BQI6 ELAC2-201ENST00000338034 3148 ntAPPRIS P1 TSL 1 (best) BASIC16.25■□□□□ 0.19
SLF1Q9BQI6 ALDH1A3-202ENST00000346623 3104 ntTSL 1 (best) BASIC16.25■□□□□ 0.19
Retrieved 100 of 98,524 protein–RNA pairs in 60.1 ms