Protein–RNA interactions for Protein: Q969K7

TMEM54, Transmembrane protein 54, humanhuman

Predictions only

Length 222 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM54Q969K7 C6orf136-202ENST00000376471 614 ntTSL 3 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 AL662890.1-201ENST00000396818 632 ntBASIC12.29□□□□□ -0.44
TMEM54Q969K7 ATP5J-205ENST00000400094 589 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 PCBP3-201ENST00000400304 1086 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM54Q969K7 GYPC-203ENST00000409836 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM54Q969K7 EEF1DP2-201ENST00000433698 843 ntBASIC12.29□□□□□ -0.44
TMEM54Q969K7 PCBP3-208ENST00000449640 1278 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 AC108462.1-201ENST00000457467 850 ntTSL 3 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 SCARNA12-201ENST00000459155 270 ntBASIC12.29□□□□□ -0.44
TMEM54Q969K7 TRBC2-201ENST00000466254 758 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 RAMP3-202ENST00000481345 559 ntAPPRIS P2 TSL 4 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 GUSBP1-202ENST00000508260 1012 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 AC025154.2-201ENST00000550530 445 ntTSL 3 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 NEAT1-203ENST00000601801 487 ntTSL 4 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 AL049840.2-201ENST00000602722 535 ntBASIC12.29□□□□□ -0.44
TMEM54Q969K7 AC006064.4-201ENST00000602946 422 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 AC007718.1-201ENST00000621078 280 ntBASIC12.29□□□□□ -0.44
TMEM54Q969K7 LINC01746-201ENST00000621390 449 ntTSL 3 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 AC068987.4-201ENST00000562343 2094 ntTSL 5 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 DAB1-207ENST00000420954 1817 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM54Q969K7 CREB3L4-204ENST00000368603 1557 ntAPPRIS P3 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM54Q969K7 DDX46-212ENST00000628477 1584 ntTSL 5 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 EIF4G1-218ENST00000434061 5026 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 PDXDC2P-206ENST00000534700 1315 ntBASIC12.29□□□□□ -0.44
TMEM54Q969K7 ADAM15-203ENST00000356955 2949 ntAPPRIS P4 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM54Q969K7 ADAM15-209ENST00000449910 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM54Q969K7 ZFP28-204ENST00000591844 3475 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM54Q969K7 PPP2R1B-204ENST00000426998 1888 ntAPPRIS ALT2 TSL 2 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 ERAL1-201ENST00000254928 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM54Q969K7 MSH2-206ENST00000543555 3024 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 AC051649.2-201ENST00000640310 3319 ntAPPRIS P1 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 SLC8A2-203ENST00000542837 3603 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 DLG1-AS1-202ENST00000430666 1694 ntTSL 1 (best) BASIC12.29□□□□□ -0.44
TMEM54Q969K7 PRR12-203ENST00000615927 4479 ntAPPRIS ALT2 TSL 5 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 PRDM4-201ENST00000228437 4210 ntAPPRIS P1 TSL 2 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 ALG11-204ENST00000616513 1983 ntTSL 2 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 DNM1P51-202ENST00000558801 8752 ntTSL 5 BASIC12.29□□□□□ -0.44
TMEM54Q969K7 NELFE-201ENST00000375425 1405 ntAPPRIS ALT2 TSL 2 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 MEIKIN-205ENST00000616644 1438 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 SETD6-203ENST00000394266 3423 ntTSL 5 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 SERPINA13P-201ENST00000469935 1718 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 MYH7-201ENST00000355349 6087 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 TOX2-202ENST00000358131 2605 ntTSL 2 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 AAR2-203ENST00000397286 1466 ntTSL 5 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 PCDHB16-201ENST00000609684 5001 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 NT5DC4-201ENST00000327581 1767 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 GOLGA8UP-201ENST00000527159 1755 ntBASIC12.28□□□□□ -0.44
TMEM54Q969K7 LINC00863-201ENST00000439559 3287 ntTSL 5 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 CLOCK-211ENST00000513440 3580 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 PKIA-202ENST00000396418 4163 ntAPPRIS P1 TSL 2 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 LINC01114-202ENST00000424321 2112 ntTSL 2 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 AC011298.1-201ENST00000407635 3398 ntTSL 2 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 KYAT1-205ENST00000436267 2487 ntTSL 2 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 TMEM78-201ENST00000323223 2175 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 LRRC41-208ENST00000617760 2158 ntTSL 5 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 ALDH7A1-201ENST00000409134 4964 ntAPPRIS P2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 SMOC2-202ENST00000356284 3117 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 CATSPERD-202ENST00000381624 2516 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 BORCS5-201ENST00000298571 549 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 PDLIM5-203ENST00000359265 1189 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 MIR1307-201ENST00000408840 149 ntBASIC12.28□□□□□ -0.44
TMEM54Q969K7 AC016876.1-201ENST00000415124 352 ntTSL 3 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 DCAF7-201ENST00000415273 1220 ntTSL 2 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 AC136604.1-202ENST00000425471 771 ntBASIC12.28□□□□□ -0.44
TMEM54Q969K7 AL591684.1-201ENST00000434533 234 ntTSL 5 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 PRKCZ-AS1-202ENST00000444529 622 ntTSL 3 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 AL356218.1-201ENST00000450864 353 ntTSL 3 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 AL136982.2-201ENST00000451760 234 ntTSL 5 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 AC112487.1-201ENST00000498032 1097 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 CDKN2AIP-205ENST00000510928 860 ntTSL 2 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 FXYD6-202ENST00000524656 1033 ntAPPRIS P2 TSL 3 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 NOP2-211ENST00000540228 668 ntTSL 2 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 STAT5A-208ENST00000587646 1022 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 AC011444.1-201ENST00000587836 639 ntTSL 3 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 IMPA2-207ENST00000588927 787 ntTSL 5 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 SNRPA1-216ENST00000626000 539 ntTSL 5 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 CMC2-224ENST00000630396 481 ntTSL 5 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 IGHG4-202ENST00000641978 2597 ntAPPRIS P1 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 GTF2I-212ENST00000573035 4548 ntAPPRIS P4 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 AC144450.1-201ENST00000366424 1641 ntTSL 2 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 AL445250.1-201ENST00000641671 2259 ntBASIC12.28□□□□□ -0.44
TMEM54Q969K7 ATRN-202ENST00000446916 3921 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 SMARCA4-204ENST00000444061 4938 ntAPPRIS ALT1 TSL 5 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 OPN4-201ENST00000241891 2308 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 PADI2-202ENST00000375486 4345 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 KDM8-212ENST00000568965 1655 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 LRIG3-201ENST00000320743 4070 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 GFPT2-201ENST00000253778 3093 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 SOGA3-201ENST00000465909 3756 ntTSL 5 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 SLC39A14-201ENST00000240095 1708 ntAPPRIS ALT2 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 ZNF683-205ENST00000436292 1712 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 AAR2-201ENST00000320849 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 PCNX1-202ENST00000439984 6988 ntTSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 ARMC7-201ENST00000245543 2126 ntAPPRIS P1 TSL 1 (best) BASIC12.28□□□□□ -0.44
TMEM54Q969K7 FAM122C-203ENST00000414371 2119 ntAPPRIS ALT2 TSL 5 BASIC12.28□□□□□ -0.44
TMEM54Q969K7 GRIN2C-201ENST00000293190 4261 ntAPPRIS P3 TSL 1 (best) BASIC12.28□□□□□ -0.44
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms