Protein–RNA interactions for Protein: Q86X40

LRRC28, Leucine-rich repeat-containing protein 28, humanhuman

Predicted RBP Predictions only

Length 367 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28Q86X40 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 URGCP-207ENST00000453200 4042 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 ACADM-201ENST00000370834 2172 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 EBP-205ENST00000495186 1775 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 AC000120.1-201ENST00000414227 1589 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 ABI2-201ENST00000261016 6634 ntTSL 2 BASIC12.56□□□□□ -0.4
LRRC28Q86X40 ABI2-203ENST00000261018 6638 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 CTTN-201ENST00000301843 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 FAM180B-201ENST00000538490 1388 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 PEAR1-202ENST00000338302 4970 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
LRRC28Q86X40 PGM3-201ENST00000283977 2219 ntTSL 5 BASIC12.56□□□□□ -0.4
LRRC28Q86X40 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC12.56□□□□□ -0.4
LRRC28Q86X40 FAM149A-203ENST00000389354 1815 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 FCHSD1-209ENST00000522783 2477 ntTSL 5 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 APBA2-212ENST00000561069 3138 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 CACNA1G-203ENST00000358244 7030 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 EIF4E2-201ENST00000258416 1604 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 YLPM1-207ENST00000552421 4899 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 ITPR3-202ENST00000605930 9029 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 NHEJ1-201ENST00000356853 2094 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 EFHC1-230ENST00000637263 2089 ntTSL 5 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 GPR35-205ENST00000438013 3821 ntAPPRIS P3 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 FP325330.2-201ENST00000624219 5630 ntBASIC12.55□□□□□ -0.4
LRRC28Q86X40 COLGALT1-201ENST00000252599 3704 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 COL20A1-203ENST00000422202 8097 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 DLX3-201ENST00000434704 2602 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 PROM2-201ENST00000317620 4728 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 HEBP1-201ENST00000014930 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 CD79A-201ENST00000221972 1258 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 C9orf24-201ENST00000297623 1151 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 TSHR-202ENST00000342443 1281 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 C9orf24-205ENST00000379133 712 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 BUD31-202ENST00000403633 1139 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 RBM24-203ENST00000425446 1034 ntTSL 3 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 OLR1-203ENST00000432556 950 ntTSL 2 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 AL161932.2-201ENST00000435436 679 ntBASIC12.55□□□□□ -0.4
LRRC28Q86X40 MACROD2-AS1-201ENST00000439451 1230 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 Z93015.1-201ENST00000451718 390 ntBASIC12.55□□□□□ -0.4
LRRC28Q86X40 STARD4-205ENST00000505803 803 ntAPPRIS P1 TSL 2 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 STARD4-207ENST00000509887 1186 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 AC009908.1-201ENST00000523030 412 ntTSL 3 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 AC022182.2-201ENST00000525556 859 ntTSL 2 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 ATF7-204ENST00000548118 774 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 AC138123.2-203ENST00000552451 653 ntTSL 3 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 AL583722.2-201ENST00000557223 663 ntTSL 3 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 AC027237.1-201ENST00000560942 655 ntBASIC12.55□□□□□ -0.4
LRRC28Q86X40 AC005586.2-201ENST00000563946 837 ntBASIC12.55□□□□□ -0.4
LRRC28Q86X40 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 MIR4741-201ENST00000579822 90 ntBASIC12.55□□□□□ -0.4
LRRC28Q86X40 EEF1DP1-201ENST00000585891 896 ntBASIC12.55□□□□□ -0.4
LRRC28Q86X40 PLA2G4C-AS1-201ENST00000596552 568 ntTSL 3 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 PAX4-207ENST00000611453 1235 ntTSL 5 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 AC006453.2-202ENST00000635968 827 ntTSL 5 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 EDDM13-208ENST00000637802 854 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 DLGAP1-AS1-201ENST00000317114 1966 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 MYRIP-204ENST00000444716 2678 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 MAP7D2-204ENST00000452324 2233 ntAPPRIS ALT2 TSL 2 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 PASK-201ENST00000234040 4572 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 SNRPN-202ENST00000390687 1528 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 MAGED4-201ENST00000375626 2495 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 PCDHA11-202ENST00000616325 3418 ntAPPRIS ALT2 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 LMBRD2-201ENST00000296603 8185 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 UBE2E2-202ENST00000396703 2748 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 EBF3-201ENST00000355311 2993 ntAPPRIS ALT1 TSL 5 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 AC005014.1-201ENST00000432006 2976 ntBASIC12.55□□□□□ -0.4
LRRC28Q86X40 AC073862.5-201ENST00000624129 2027 ntBASIC12.55□□□□□ -0.4
LRRC28Q86X40 FXYD3-202ENST00000346446 1320 ntTSL 2 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 ST5-256ENST00000534127 4545 ntAPPRIS P4 TSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 COL1A2-213ENST00000620463 4523 ntTSL 5 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 MYCBP-201ENST00000397572 2818 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 HINT3-201ENST00000229633 3314 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
LRRC28Q86X40 PLPP6-201ENST00000381883 2944 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
LRRC28Q86X40 LIX1L-201ENST00000604000 3975 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 LILRA1-201ENST00000251372 1910 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 ZDHHC15-201ENST00000373367 5796 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 KLC2-206ENST00000417856 3015 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 LDLRAD3-202ENST00000524419 1996 ntTSL 5 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 DDX43-201ENST00000370336 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 AC015921.1-201ENST00000574885 2546 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 F10-203ENST00000409306 1450 ntTSL 3 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 ANGPTL2-201ENST00000373417 2575 ntTSL 2 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 GOLGA7B-203ENST00000596005 6378 ntTSL 2 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 AOC1-204ENST00000467291 2857 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 COL2A1-201ENST00000337299 4257 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 FAM120B-205ENST00000630384 3721 ntAPPRIS ALT2 TSL 2 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 GCNT7-201ENST00000243913 2064 ntTSL 2 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 PGA5-201ENST00000312403 1519 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 ANKRD33-202ENST00000340970 1507 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 SUN2-201ENST00000405018 4022 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 CCT3-204ENST00000368259 1815 ntTSL 2 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 TRMT112-201ENST00000308774 561 ntAPPRIS ALT1 TSL 2 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 CSAG1-202ENST00000370287 875 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 NCR3-204ENST00000376073 1097 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 FAM27C-201ENST00000377542 616 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
LRRC28Q86X40 AL136309.1-201ENST00000403917 691 ntBASIC12.54□□□□□ -0.4
LRRC28Q86X40 MCFD2-204ENST00000409207 1113 ntAPPRIS P1 TSL 2 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 BTBD6P1-201ENST00000412176 1267 ntBASIC12.54□□□□□ -0.4
LRRC28Q86X40 RGS5-214ENST00000429865 754 ntTSL 3 BASIC12.54□□□□□ -0.4
LRRC28Q86X40 PFN1P12-201ENST00000455938 534 ntBASIC12.54□□□□□ -0.4
Retrieved 100 of 98,524 protein–RNA pairs in 67.3 ms