Protein–RNA interactions for Protein: Q7RTS3

PTF1A, Pancreas transcription factor 1 subunit alpha, humanhuman

Predictions only

Length 328 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTF1AQ7RTS3 AC092634.5-206ENST00000593670 812 ntTSL 5 BASIC17.44■□□□□ 0.38
PTF1AQ7RTS3 AC116036.2-201ENST00000607592 462 ntBASIC17.44■□□□□ 0.38
PTF1AQ7RTS3 SMPD4-202ENST00000409031 4896 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTF1AQ7RTS3 PRKACB-205ENST00000370688 1905 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTF1AQ7RTS3 BAZ1A-203ENST00000382422 5775 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTF1AQ7RTS3 ZNF354B-201ENST00000322434 2802 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTF1AQ7RTS3 SNX19-213ENST00000534726 1656 ntTSL 1 (best) BASIC17.44■□□□□ 0.38
PTF1AQ7RTS3 PDE8B-201ENST00000264917 5956 ntAPPRIS P3 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTF1AQ7RTS3 NDNF-201ENST00000379692 2885 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTF1AQ7RTS3 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC17.44■□□□□ 0.38
PTF1AQ7RTS3 ATP6V0D1-218ENST00000602876 1554 ntTSL 5 BASIC17.44■□□□□ 0.38
PTF1AQ7RTS3 PCGF3-201ENST00000362003 5685 ntAPPRIS P1 TSL 5 BASIC17.44■□□□□ 0.38
PTF1AQ7RTS3 CALU-202ENST00000449187 2438 ntAPPRIS ALT1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 SERPING1-201ENST00000278407 2002 ntAPPRIS P2 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 TRIML2-207ENST00000512729 1639 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 COPS5-203ENST00000517736 1621 ntTSL 5 BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 RHPN1-201ENST00000289013 3683 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 ATF4P4-201ENST00000393544 1930 ntBASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 PRSS16-203ENST00000421826 1949 ntTSL 2 BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 RBMS3-210ENST00000456853 1394 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 TBC1D3-201ENST00000620215 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 TBC1D3C-201ENST00000622206 2063 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 AL031280.1-201ENST00000436991 2224 ntTSL 2 BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 AC020763.3-201ENST00000625095 2904 ntBASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 KCNA5-201ENST00000252321 2800 ntAPPRIS P1 BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 SSH3-203ENST00000376757 2990 ntTSL 2 BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 AL356653.1-201ENST00000402743 360 ntBASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 MACROD2-204ENST00000407045 727 ntTSL 1 (best) BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 TUBB8P9-201ENST00000422534 1276 ntBASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 TUBB8P10-201ENST00000430210 1279 ntBASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 AL137077.1-201ENST00000442115 528 ntBASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 SMIM14-205ENST00000511809 830 ntTSL 2 BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 AC004923.1-201ENST00000527543 776 ntTSL 5 BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 AL161668.2-201ENST00000531638 492 ntTSL 5 BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 AC010601.2-201ENST00000623060 774 ntBASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 AC112702.1-201ENST00000623712 366 ntBASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 CANX-201ENST00000247461 4260 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 AC012358.2-201ENST00000430010 1434 ntBASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 SDR42E2-201ENST00000602312 2630 ntAPPRIS P1 TSL 5 BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 AC004223.3-201ENST00000593039 1638 ntAPPRIS P5 TSL 2 BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 RPUSD2-201ENST00000315616 2358 ntAPPRIS P3 TSL 1 (best) BASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 AC144831.1-201ENST00000573312 2656 ntBASIC17.43■□□□□ 0.38
PTF1AQ7RTS3 GABBR1-205ENST00000377034 4527 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 USP10-201ENST00000219473 3009 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 CDK13-201ENST00000181839 7298 ntAPPRIS P4 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 PIGT-203ENST00000372689 1971 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 ZNF33A-205ENST00000469037 1530 ntTSL 5 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 CTDSP1-201ENST00000273062 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 PPP1R21-201ENST00000281394 3137 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 SEPT4-223ENST00000583114 1709 ntTSL 2 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 GAS2L2-203ENST00000618498 2655 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 CDCA7-202ENST00000347703 2500 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 FRZB-201ENST00000295113 3162 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 PPM1H-201ENST00000228705 6353 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 PDZD11-201ENST00000239666 1043 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 AC138392.1-201ENST00000427577 921 ntBASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 AL121972.2-201ENST00000431108 556 ntTSL 4 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 AC053503.4-201ENST00000431827 224 ntTSL 5 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 AP002856.3-201ENST00000441665 635 ntTSL 3 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 RN7SL340P-201ENST00000470792 296 ntBASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 HOXB-AS3-209ENST00000477144 743 ntTSL 5 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 AC124242.1-203ENST00000517747 817 ntTSL 3 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 FAM213AP2-201ENST00000521579 683 ntBASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 AP003108.1-201ENST00000534856 554 ntTSL 4 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 RAB42P1-201ENST00000555078 316 ntBASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 AL157871.2-201ENST00000556212 552 ntTSL 3 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 AC005920.4-201ENST00000573301 492 ntTSL 4 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 NAA38-204ENST00000575208 529 ntTSL 3 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 ALOX12P1-201ENST00000579299 1229 ntBASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 GACAT2-201ENST00000579368 818 ntTSL 2 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 BLVRB-202ENST00000595483 649 ntTSL 2 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 AL033381.2-201ENST00000603854 732 ntBASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 AC136475.9-201ENST00000605240 497 ntBASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 CBWD5-204ENST00000377392 2863 ntTSL 2 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 NUP93-201ENST00000308159 2741 ntAPPRIS P1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 HSPA7-201ENST00000445535 1927 ntBASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 ROCK2-209ENST00000616279 6401 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 MINDY2-202ENST00000450403 4820 ntAPPRIS ALT2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 TAF4B-203ENST00000578121 3204 ntAPPRIS ALT2 TSL 2 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 REPS1-208ENST00000450536 4537 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 KRTAP10-4-201ENST00000400374 1643 ntAPPRIS P2 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 FANCG-201ENST00000378643 2631 ntAPPRIS P2 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 AKT1S1-205ENST00000391833 3640 ntAPPRIS P1 TSL 2 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 PGAP2-202ENST00000300730 1843 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 PGAP2-203ENST00000396986 1837 ntTSL 2 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 RHOXF1P3-203ENST00000640298 2668 ntTSL 5 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 ETNPPL-202ENST00000411864 2028 ntAPPRIS ALT1 TSL 1 (best) BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 GPR84-202ENST00000551809 2041 ntAPPRIS P1 BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 PRSS30P-201ENST00000390681 2881 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC17.42■□□□□ 0.38
PTF1AQ7RTS3 PCDHA7-201ENST00000356878 2922 ntAPPRIS ALT2 BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 KRT26-201ENST00000335552 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 GOLGA5-201ENST00000163416 2969 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
PTF1AQ7RTS3 B4GALNT1-201ENST00000341156 3036 ntAPPRIS P1 TSL 1 (best) BASIC17.41■□□□□ 0.38
Retrieved 100 of 98,524 protein–RNA pairs in 35.8 ms