Protein–RNA interactions for Protein: Q5XG99

LYSMD4, LysM and putative peptidoglycan-binding domain-containing protein 4, humanhuman

Predictions only

Length 296 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4Q5XG99 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 RAI14-202ENST00000428746 5064 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 AC103702.1-201ENST00000548801 2630 ntBASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 POLL-206ENST00000370172 2308 ntTSL 2 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 LDLR-202ENST00000455727 2333 ntTSL 2 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 ATE1-203ENST00000369043 4900 ntAPPRIS ALT1 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 RCSD1-206ENST00000537350 3044 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 KANK2-205ENST00000589359 3048 ntAPPRIS ALT2 TSL 5 BASIC13.56□□□□□ -0.24
LYSMD4Q5XG99 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 TICRR-201ENST00000268138 6775 ntAPPRIS P3 TSL 5 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 XPNPEP1-218ENST00000502935 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 SNX30-201ENST00000374232 7622 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 RAD23A-209ENST00000592268 1526 ntTSL 5 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 AC004997.1-205ENST00000447976 1851 ntTSL 2 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 ZNF7-203ENST00000525266 1874 ntTSL 2 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 AC126177.1-201ENST00000547829 2218 ntBASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 DCBLD1-202ENST00000338728 3626 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 CBS-204ENST00000398165 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 FCRL6-201ENST00000321935 1997 ntAPPRIS ALT2 TSL 2 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 AC011462.1-202ENST00000540732 1960 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 MT1E-202ENST00000330439 729 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 TAC4-203ENST00000352793 564 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 PGK1P2-201ENST00000431702 1214 ntBASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 C10orf91-203ENST00000490765 462 ntTSL 3 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 AC103736.1-201ENST00000524410 605 ntTSL 3 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 ZNF816-208ENST00000535506 529 ntTSL 4 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 TCL1A-209ENST00000557043 980 ntTSL 3 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 IFI27L1-211ENST00000557066 580 ntTSL 3 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 IFI27L1-212ENST00000557218 413 ntTSL 3 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 AP001094.3-201ENST00000580491 616 ntTSL 2 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 PRR20FP-201ENST00000603320 180 ntBASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 AC080013.5-201ENST00000607044 679 ntBASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 AC079779.4-201ENST00000619113 548 ntTSL 5 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 CCNA2-201ENST00000274026 2797 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 VASH1-AS1-202ENST00000556072 1684 ntTSL 2 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 GPR161-202ENST00000367835 2400 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 LILRB3-201ENST00000245620 2066 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 SIGLEC11-202ENST00000426971 2479 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 FES-203ENST00000394302 2133 ntTSL 5 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 KRT8P42-201ENST00000405771 1399 ntBASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 AC073264.3-201ENST00000636941 2577 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 TRIM13-204ENST00000420995 2607 ntAPPRIS P3 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 PTGR1-205ENST00000407693 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 PRNP-201ENST00000379440 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 ZFR2-201ENST00000262961 4756 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 CCNE2-201ENST00000308108 2724 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 ATP6V1C1-205ENST00000521514 1484 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
LYSMD4Q5XG99 TPCN1-214ENST00000550785 5345 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 GAD2-203ENST00000376261 5858 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 AC003986.1-201ENST00000452700 1526 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 HOXA3-202ENST00000396352 3263 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 TRIM13-202ENST00000378182 7249 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 LOXHD1-203ENST00000398686 1958 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 IL17RD-201ENST00000296318 8720 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 SDF2-201ENST00000247020 1568 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 HECW1-203ENST00000453890 5169 ntAPPRIS ALT2 TSL 2 BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 AC097374.1-201ENST00000568768 6624 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 PI16-203ENST00000611814 2083 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 TMEM30B-202ENST00000555868 4471 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 SLC6A20-202ENST00000358525 5423 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 CAPN2-201ENST00000295006 3573 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 SARM1-208ENST00000585482 10309 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 ATP8B3-201ENST00000310127 5095 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 WNT9B-202ENST00000393461 2654 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 SPIN3-245ENST00000640768 1722 ntTSL 5 BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 SLC38A4-201ENST00000266579 2728 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 ADAM23-202ENST00000374415 2714 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 IFRD1-202ENST00000403825 2290 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 TBC1D22A-205ENST00000406733 2267 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 MIR611-201ENST00000384869 67 ntBASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 AP001596.1-201ENST00000429340 781 ntTSL 5 BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 TREX1-203ENST00000456089 629 ntTSL 3 BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 RN7SL684P-201ENST00000465665 294 ntBASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 GLUD1P3-201ENST00000507952 896 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 OR4A49P-201ENST00000527050 632 ntBASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 AC093510.1-202ENST00000546238 442 ntTSL 3 BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 AC104590.1-201ENST00000560813 648 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 SNX11-210ENST00000582104 1282 ntTSL 2 BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 AL513478.2-202ENST00000621949 835 ntTSL 3 BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 GSTT2-203ENST00000634759 1184 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 SLC43A2-201ENST00000301335 8136 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 WIZ-203ENST00000545156 4466 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 AGAP9-201ENST00000452145 2387 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 AC073324.2-201ENST00000626532 2941 ntTSL 4 BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 AC015802.6-201ENST00000640006 5654 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 MIF4GD-201ENST00000245551 1358 ntTSL 3 BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 ELP4-201ENST00000350638 1907 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 TCL1A-201ENST00000402399 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 TNFRSF11A-202ENST00000586569 8147 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 ECI2-202ENST00000380118 1407 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 UBXN11-206ENST00000374222 2043 ntAPPRIS P4 TSL 5 BASIC13.54□□□□□ -0.24
LYSMD4Q5XG99 CNKSR1-201ENST00000361530 2625 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Retrieved 100 of 98,524 protein–RNA pairs in 64.7 ms