Protein–RNA interactions for Protein: Q3ZCM7

TUBB8, Tubulin beta-8 chain, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB8Q3ZCM7 ZNF75A-205ENST00000574298 2347 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 AL359915.2-202ENST00000440150 2469 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 MYO9B-204ENST00000594824 7595 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 PLEKHB2-202ENST00000403716 4349 ntTSL 3 BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 RANBP17-219ENST00000523189 4588 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 KRT74-201ENST00000305620 2788 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 SRPRA-201ENST00000332118 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 ACACA-237ENST00000616317 9961 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 TRPM5-203ENST00000533060 3562 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 POLR2J-201ENST00000292614 932 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 LBX2-201ENST00000341396 886 ntTSL 3 BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 RHCE-205ENST00000349438 1235 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 RPF1-202ENST00000370656 724 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 PRAF2-201ENST00000376386 801 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 PGGT1B-202ENST00000379615 903 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 PTPA-213ENST00000419582 952 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 DHDDS-206ENST00000427245 868 ntTSL 5 BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 RPL28-203ENST00000428193 573 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 GNB3-202ENST00000435982 1110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 RAB34-210ENST00000436730 863 ntAPPRIS P1 TSL 3 BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 LINC01585-201ENST00000500496 1295 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 RPL28-207ENST00000558815 616 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 SLC38A7-207ENST00000564391 731 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 C19orf53-206ENST00000593274 491 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 AC015819.2-201ENST00000618730 555 ntTSL 3 BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 COX11-210ENST00000639671 696 ntBASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 SLC25A36-201ENST00000324194 1301 ntAPPRIS ALT1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 TUBB4AP1-201ENST00000450755 1325 ntBASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 AC025183.3-201ENST00000623526 1482 ntBASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 USP6NL-205ENST00000609104 11377 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 AL138799.1-201ENST00000448213 1675 ntBASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 SLC8B1-202ENST00000546737 1656 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 PLCXD2-204ENST00000477665 1721 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 DYRK4-201ENST00000010132 1840 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 C1QTNF9-201ENST00000332018 1830 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 DRG2-202ENST00000395726 1897 ntTSL 5 BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 ZNF239-205ENST00000535642 1904 ntAPPRIS P1 TSL 2 BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 HDAC8-207ENST00000373573 2014 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 SLC25A35-203ENST00000579192 2136 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 MDM1-205ENST00000430606 2170 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 XRCC6-201ENST00000359308 2709 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 C10orf90-202ENST00000356858 2995 ntAPPRIS ALT2 TSL 5 BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 RNF165-202ENST00000543885 4852 ntTSL 2 BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 GATAD2A-201ENST00000358713 5510 ntAPPRIS P3 TSL 1 (best) BASIC14.54□□□□□ -0.08
TUBB8Q3ZCM7 HSPA12A-205ENST00000635765 5841 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 PLEKHA7-202ENST00000355661 4980 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 GPHN-203ENST00000478722 4297 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 PSKH1-201ENST00000291041 3481 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 PCDHB17P-202ENST00000623466 3066 ntBASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 PPME1-201ENST00000328257 2677 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 SLC28A1-201ENST00000286749 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 LINC01623-201ENST00000440244 2458 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 ZCCHC12-201ENST00000310164 2231 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 NDUFAF7-201ENST00000002125 2176 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 HSPA8P9-201ENST00000485881 1943 ntBASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 C16orf45-202ENST00000452191 1865 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 USP2-AS1-202ENST00000500970 1784 ntTSL 2 BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 OGDH-204ENST00000443864 1744 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 AP1M1-211ENST00000590756 1705 ntTSL 5 BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 RBPJ-203ENST00000345843 1682 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 NMNAT3-201ENST00000296202 1569 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 SLC38A7-201ENST00000219320 4392 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 RGR-201ENST00000358110 1349 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 PPFIA4-203ENST00000367240 6434 ntAPPRIS P5 TSL 5 BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 NINJ2-201ENST00000305108 1252 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 VAPA-201ENST00000340541 1227 ntTSL 5 BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 APOA1-204ENST00000375323 1088 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 AC005229.1-201ENST00000392885 409 ntBASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 AL139158.2-202ENST00000428151 573 ntTSL 3 BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 SVIL-AS1-208ENST00000446807 1007 ntTSL 3 BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 XXYLT1-AS1-201ENST00000458531 431 ntTSL 3 BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 MUTYH-237ENST00000531105 501 ntTSL 5 BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 CACNA2D4-208ENST00000538027 952 ntTSL 5 BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 AP001063.1-201ENST00000568332 529 ntBASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 AC005262.2-201ENST00000587701 452 ntTSL 5 BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 ELN-234ENST00000621115 3452 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 KLHL7-202ENST00000339077 5620 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 PDCD6IPP2-206ENST00000566178 3351 ntTSL 5 BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 ZNF774-201ENST00000354377 3202 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 MALL-201ENST00000272462 3061 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 OCA2-201ENST00000353809 3068 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 ZMIZ1-AS1-203ENST00000456353 2878 ntTSL 2 BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 SLC4A5-201ENST00000346834 6233 ntAPPRIS P4 TSL 5 BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 CSNK1E-201ENST00000359867 2642 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 PCCB-210ENST00000471595 6090 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 LARGE1-203ENST00000402320 3955 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 UBE2W-201ENST00000419880 2315 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 AGAP12P-202ENST00000603888 2141 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 EPB42-203ENST00000540029 2098 ntTSL 2 BASIC14.53□□□□□ -0.08
TUBB8Q3ZCM7 MCRIP1-212ENST00000576730 2979 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.08
TUBB8Q3ZCM7 TBP-206ENST00000540980 1701 ntAPPRIS ALT2 TSL 2 BASIC14.52□□□□□ -0.08
TUBB8Q3ZCM7 NRP1-202ENST00000374816 2804 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TUBB8Q3ZCM7 CCNE1-203ENST00000444983 1680 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TUBB8Q3ZCM7 LINC01679-201ENST00000442815 2798 ntTSL 3 BASIC14.52□□□□□ -0.08
TUBB8Q3ZCM7 LIMS2-206ENST00000409754 1620 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
TUBB8Q3ZCM7 DNMT3B-205ENST00000443239 2674 ntTSL 2 BASIC14.52□□□□□ -0.08
TUBB8Q3ZCM7 VHL-201ENST00000256474 3737 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBB8Q3ZCM7 APLP2-201ENST00000263574 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
TUBB8Q3ZCM7 XAF1-201ENST00000346752 1584 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Retrieved 100 of 98,524 protein–RNA pairs in 37.5 ms