Protein–RNA interactions for Protein: P78413

IRX4, Iroquois-class homeodomain protein IRX-4, humanhuman

Predictions only

Length 519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
IRX4P78413 MAN2B1-203ENST00000456935 3184 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 ADGRG6-202ENST00000296932 6849 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 AL122018.1-201ENST00000446607 2310 ntBASIC14.71□□□□□ -0.05
IRX4P78413 LINC02396-202ENST00000550636 2324 ntTSL 2 BASIC14.71□□□□□ -0.05
IRX4P78413 SGSM1-206ENST00000610372 5991 ntTSL 5 BASIC14.71□□□□□ -0.05
IRX4P78413 DCAF8-201ENST00000326837 3972 ntAPPRIS P1 TSL 5 BASIC14.71□□□□□ -0.05
IRX4P78413 AC074138.1-201ENST00000611182 1303 ntBASIC14.71□□□□□ -0.05
IRX4P78413 GPRC5B-209ENST00000569479 2984 ntAPPRIS P2 TSL 5 BASIC14.71□□□□□ -0.05
IRX4P78413 LINC00987-201ENST00000427111 2472 ntTSL 2 BASIC14.71□□□□□ -0.05
IRX4P78413 LINC02346-201ENST00000383019 1967 ntTSL 2 BASIC14.71□□□□□ -0.05
IRX4P78413 OPRL1-203ENST00000355631 3147 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 AC003102.2-201ENST00000589195 1469 ntBASIC14.71□□□□□ -0.05
IRX4P78413 GTF2I-215ENST00000614986 4415 ntAPPRIS ALT1 TSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 GTF2I-221ENST00000621734 4412 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 PPP6R2-204ENST00000395744 3293 ntAPPRIS P3 TSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 FER1L4-204ENST00000430275 3281 ntTSL 5 BASIC14.71□□□□□ -0.05
IRX4P78413 SLC16A1-201ENST00000369626 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 KIRREL2-203ENST00000360202 2942 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 NOX5-209ENST00000530406 2289 ntAPPRIS P4 TSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 AC099521.3-201ENST00000624251 2938 ntBASIC14.71□□□□□ -0.05
IRX4P78413 HBP1-212ENST00000485846 2420 ntAPPRIS P1 TSL 2 BASIC14.71□□□□□ -0.05
IRX4P78413 AC239798.2-201ENST00000415338 3540 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 SNED1-205ENST00000405547 7986 ntAPPRIS ALT2 TSL 5 BASIC14.71□□□□□ -0.05
IRX4P78413 ATP5H-201ENST00000301587 603 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 MUC1-203ENST00000342482 537 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 OR2K2-202ENST00000374428 1038 ntBASIC14.71□□□□□ -0.05
IRX4P78413 ETV2-201ENST00000379023 926 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 KRTAP10-3-201ENST00000391620 971 ntAPPRIS P1 BASIC14.71□□□□□ -0.05
IRX4P78413 HPGD-203ENST00000422112 805 ntTSL 2 BASIC14.71□□□□□ -0.05
IRX4P78413 C14orf178-202ENST00000439131 632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 SAP30L-203ENST00000440364 792 ntTSL 3 BASIC14.71□□□□□ -0.05
IRX4P78413 IL1R2-203ENST00000441002 1106 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 AC012441.2-201ENST00000444843 739 ntBASIC14.71□□□□□ -0.05
IRX4P78413 Z82198.1-201ENST00000447396 437 ntTSL 3 BASIC14.71□□□□□ -0.05
IRX4P78413 PGAP2-208ENST00000464229 863 ntTSL 3 BASIC14.71□□□□□ -0.05
IRX4P78413 AC022858.1-201ENST00000521685 685 ntTSL 3 BASIC14.71□□□□□ -0.05
IRX4P78413 RNASEK-210ENST00000593646 566 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 EXOSC5-204ENST00000596905 826 ntTSL 2 BASIC14.71□□□□□ -0.05
IRX4P78413 ALKBH2-208ENST00000619381 895 ntTSL 5 BASIC14.71□□□□□ -0.05
IRX4P78413 IFI27-215ENST00000621160 644 ntAPPRIS P2 TSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 YRDCP1-201ENST00000621419 643 ntBASIC14.71□□□□□ -0.05
IRX4P78413 CATSPERE-201ENST00000366531 3038 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
IRX4P78413 CNTN1-203ENST00000547702 3033 ntTSL 2 BASIC14.71□□□□□ -0.05
IRX4P78413 ZNF619-201ENST00000314686 2233 ntTSL 2 BASIC14.71□□□□□ -0.05
IRX4P78413 ZNF7-202ENST00000446747 2242 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 FRMD4B-201ENST00000398540 5060 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 SH3GLB2-205ENST00000416629 1415 ntTSL 5 BASIC14.71□□□□□ -0.05
IRX4P78413 PTOV1-214ENST00000600603 1443 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 TNS2-203ENST00000379902 4737 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 LINC00680-205ENST00000450081 1593 ntTSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 ZCCHC7-209ENST00000534928 2828 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 FAM200B-201ENST00000422728 2962 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 ADAT1-201ENST00000307921 1869 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 RMND1-202ENST00000367303 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 AL591122.2-201ENST00000624125 1853 ntBASIC14.71□□□□□ -0.05
IRX4P78413 ARAP1-202ENST00000359373 5767 ntAPPRIS ALT2 TSL 2 BASIC14.71□□□□□ -0.05
IRX4P78413 NLRP7-209ENST00000592784 3269 ntAPPRIS ALT2 TSL 1 (best) BASIC14.71□□□□□ -0.05
IRX4P78413 POMT1-201ENST00000341012 2912 ntTSL 2 BASIC14.71□□□□□ -0.06
IRX4P78413 FOXF1-201ENST00000262426 3516 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
IRX4P78413 TOB1-AS1-201ENST00000416263 1351 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
IRX4P78413 KLK6-201ENST00000310157 1511 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
IRX4P78413 C2-205ENST00000418949 1658 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
IRX4P78413 LINC01873-201ENST00000428647 1679 ntTSL 1 (best) BASIC14.71□□□□□ -0.06
IRX4P78413 INTS11-248ENST00000545578 2263 ntTSL 2 BASIC14.71□□□□□ -0.06
IRX4P78413 PI4KA-201ENST00000255882 6752 ntAPPRIS P1 TSL 1 (best) BASIC14.71□□□□□ -0.06
IRX4P78413 FRMD8-201ENST00000317568 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 RPGRIP1-210ENST00000556336 2955 ntTSL 5 BASIC14.7□□□□□ -0.06
IRX4P78413 DMTN-214ENST00000519907 2658 ntTSL 5 BASIC14.7□□□□□ -0.06
IRX4P78413 GNPNAT1-203ENST00000554230 2238 ntTSL 5 BASIC14.7□□□□□ -0.06
IRX4P78413 BBS1-202ENST00000393994 1790 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 AL008718.2-201ENST00000609206 1313 ntBASIC14.7□□□□□ -0.06
IRX4P78413 RAPGEF3-218ENST00000548919 2776 ntTSL 2 BASIC14.7□□□□□ -0.06
IRX4P78413 GSE1-203ENST00000405402 4366 ntAPPRIS ALT2 TSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 CNGA3-204ENST00000409937 2615 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
IRX4P78413 GRIN1-207ENST00000371560 3640 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 ELF3-202ENST00000367283 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 CBX6-201ENST00000216083 3191 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
IRX4P78413 SF1-201ENST00000227503 2850 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 PLTP-203ENST00000372431 1743 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 CENPBD1-201ENST00000314994 2744 ntAPPRIS P1 BASIC14.7□□□□□ -0.06
IRX4P78413 ZNF335-201ENST00000322927 4430 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 GP6-201ENST00000310373 2268 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 DKK4-201ENST00000220812 894 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 NR0B2-201ENST00000254227 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 C11orf52-201ENST00000278601 1141 ntAPPRIS P1 TSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 CRB3-201ENST00000308243 631 ntAPPRIS ALT2 TSL 2 BASIC14.7□□□□□ -0.06
IRX4P78413 AC239868.1-201ENST00000369385 493 ntBASIC14.7□□□□□ -0.06
IRX4P78413 PBDC1-201ENST00000373357 977 ntTSL 2 BASIC14.7□□□□□ -0.06
IRX4P78413 AC069277.1-202ENST00000414438 761 ntTSL 3 BASIC14.7□□□□□ -0.06
IRX4P78413 AC068134.1-201ENST00000441266 481 ntTSL 3 BASIC14.7□□□□□ -0.06
IRX4P78413 KRT18P66-201ENST00000452970 1269 ntBASIC14.7□□□□□ -0.06
IRX4P78413 SCARNA21-201ENST00000517026 139 ntBASIC14.7□□□□□ -0.06
IRX4P78413 UBE3B-206ENST00000536398 1120 ntTSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 TMEM231-206ENST00000565067 1078 ntTSL 5 BASIC14.7□□□□□ -0.06
IRX4P78413 AC026803.1-201ENST00000569130 274 ntBASIC14.7□□□□□ -0.06
IRX4P78413 DHRS7C-202ENST00000571134 984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 GMFG-209ENST00000600322 622 ntTSL 5 BASIC14.7□□□□□ -0.06
IRX4P78413 HIST2H2BB-202ENST00000609585 563 ntTSL 2 BASIC14.7□□□□□ -0.06
IRX4P78413 CUTA-215ENST00000611509 1199 ntAPPRIS P3 TSL 1 (best) BASIC14.7□□□□□ -0.06
IRX4P78413 AC234782.2-201ENST00000614615 1240 ntTSL 2 BASIC14.7□□□□□ -0.06
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms