Protein–RNA interactions for Protein: P62987

UBA52, Ubiquitin-60S ribosomal protein L40, humanhuman

Known RBP Predictions only

Length 128 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBA52P62987 LCA5-202ENST00000392959 4719 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 DYSF-202ENST00000394120 6543 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 RSBN1L-201ENST00000334955 6422 ntAPPRIS P2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 TJAP1-204ENST00000372449 2695 ntTSL 5 BASIC12.23□□□□□ -0.45
UBA52P62987 ALDH3A1-201ENST00000225740 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 PPT2-245ENST00000361568 1759 ntAPPRIS P4 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 TRPM5-202ENST00000528453 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 BDH1-202ENST00000392378 3455 ntAPPRIS P1 TSL 1 (best) BASIC12.23□□□□□ -0.45
UBA52P62987 GMEB2-203ENST00000370077 4223 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 MKL1-211ENST00000618196 4248 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 CYP2E1-201ENST00000252945 1667 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 SNUPN-206ENST00000564675 1682 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
UBA52P62987 PCDHB10-201ENST00000239446 3290 ntAPPRIS P1 BASIC12.22□□□□□ -0.45
UBA52P62987 NUB1-201ENST00000413040 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 LINC02273-201ENST00000499452 1592 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 USP47-202ENST00000339865 7775 ntTSL 2 BASIC12.22□□□□□ -0.45
UBA52P62987 ECSIT-201ENST00000252440 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 AL162231.1-201ENST00000421828 1525 ntAPPRIS P2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 NPTN-IT1-201ENST00000628401 2283 ntBASIC12.22□□□□□ -0.45
UBA52P62987 LRCH3-203ENST00000425562 2970 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
UBA52P62987 ABI2-213ENST00000424558 2240 ntTSL 2 BASIC12.22□□□□□ -0.45
UBA52P62987 CSTB-201ENST00000291568 2164 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 ATL2-210ENST00000452935 2199 ntTSL 2 BASIC12.22□□□□□ -0.45
UBA52P62987 URGCP-201ENST00000336086 5658 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 STRA6-222ENST00000616000 2843 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
UBA52P62987 LMAN2L-202ENST00000377079 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 LDB3-202ENST00000361373 5297 ntAPPRIS P3 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 TARS2-203ENST00000369054 1998 ntTSL 2 BASIC12.22□□□□□ -0.45
UBA52P62987 DCAF10-202ENST00000377724 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 ATP6V1F-201ENST00000249289 704 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 YIPF7-201ENST00000332990 937 ntTSL 5 BASIC12.22□□□□□ -0.45
UBA52P62987 PPIE-203ENST00000372830 1198 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 VAMP1-202ENST00000396308 1113 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
UBA52P62987 LIMS4-201ENST00000413601 1215 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 FAM8A4P-201ENST00000435433 1213 ntBASIC12.22□□□□□ -0.45
UBA52P62987 IQCF3-203ENST00000444293 450 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 ZNF789-204ENST00000448667 1055 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 EIF4HP1-201ENST00000453115 687 ntBASIC12.22□□□□□ -0.45
UBA52P62987 PARP8-206ENST00000503665 572 ntTSL 4 BASIC12.22□□□□□ -0.45
UBA52P62987 AC108142.1-201ENST00000505389 286 ntTSL 3 BASIC12.22□□□□□ -0.45
UBA52P62987 TNNT1-203ENST00000536926 901 ntAPPRIS ALT2 TSL 5 BASIC12.22□□□□□ -0.45
UBA52P62987 CATSPERZ-203ENST00000539943 917 ntAPPRIS ALT2 TSL 2 BASIC12.22□□□□□ -0.45
UBA52P62987 AC007333.1-201ENST00000568286 630 ntTSL 3 BASIC12.22□□□□□ -0.45
UBA52P62987 SCN1B-204ENST00000596348 1176 ntTSL 5 BASIC12.22□□□□□ -0.45
UBA52P62987 AC016629.1-201ENST00000596579 586 ntBASIC12.22□□□□□ -0.45
UBA52P62987 HCG18-245ENST00000602550 559 ntTSL 4 BASIC12.22□□□□□ -0.45
UBA52P62987 CCL5-202ENST00000605140 1244 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
UBA52P62987 AC007663.3-201ENST00000609632 465 ntBASIC12.22□□□□□ -0.45
UBA52P62987 LINC00854-216ENST00000636331 718 ntAPPRIS P5 TSL 5 BASIC12.22□□□□□ -0.45
UBA52P62987 AC138627.1-207ENST00000641560 1006 ntBASIC12.22□□□□□ -0.45
UBA52P62987 CEP295NL-205ENST00000619342 1866 ntTSL 5 BASIC12.22□□□□□ -0.45
UBA52P62987 LINC00865-202ENST00000448963 4272 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 GTF2IRD2B-203ENST00000472837 3560 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 TRABD2B-202ENST00000606738 7034 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 RBM47-201ENST00000295971 4056 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
UBA52P62987 SLC46A1-207ENST00000612814 6376 ntAPPRIS P1 TSL 2 BASIC12.22□□□□□ -0.45
UBA52P62987 AC239799.1-201ENST00000612520 3411 ntAPPRIS P1 TSL 5 BASIC12.22□□□□□ -0.45
UBA52P62987 STRIP2-201ENST00000249344 5115 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 SLC29A4-201ENST00000297195 2839 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 FUT3-207ENST00000589620 2239 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 NEK9-201ENST00000238616 8310 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 MYLIP-201ENST00000349606 2796 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 CRISPLD2-209ENST00000567845 2178 ntAPPRIS ALT1 TSL 5 BASIC12.22□□□□□ -0.45
UBA52P62987 POTEE-201ENST00000356920 4159 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 PDE4DIP-227ENST00000529945 8824 ntTSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 AL031719.1-201ENST00000623365 2587 ntBASIC12.22□□□□□ -0.45
UBA52P62987 TRPC6-201ENST00000344327 4612 ntAPPRIS P1 TSL 1 (best) BASIC12.22□□□□□ -0.45
UBA52P62987 CD300C-201ENST00000330793 1517 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBA52P62987 TRIT1-214ENST00000537440 2026 ntTSL 5 BASIC12.21□□□□□ -0.45
UBA52P62987 TCTN2-202ENST00000426174 2513 ntAPPRIS ALT2 TSL 2 BASIC12.21□□□□□ -0.45
UBA52P62987 RAB6B-201ENST00000285208 5526 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBA52P62987 AP2M1-207ENST00000439647 1950 ntAPPRIS ALT1 TSL 2 BASIC12.21□□□□□ -0.45
UBA52P62987 MSTO1-201ENST00000245564 2431 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBA52P62987 TRIM45-202ENST00000369461 2415 ntTSL 5 BASIC12.21□□□□□ -0.45
UBA52P62987 RGL4-202ENST00000401461 2420 ntAPPRIS ALT2 TSL 5 BASIC12.21□□□□□ -0.45
UBA52P62987 SERPINI1-201ENST00000295777 1907 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBA52P62987 TFIP11-201ENST00000405938 2896 ntAPPRIS P1 TSL 5 BASIC12.21□□□□□ -0.45
UBA52P62987 Z97192.2-201ENST00000393264 2379 ntTSL 2 BASIC12.21□□□□□ -0.45
UBA52P62987 TMPRSS13-202ENST00000445164 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBA52P62987 BHLHE40-AS1-204ENST00000620618 2355 ntTSL 2 BASIC12.21□□□□□ -0.45
UBA52P62987 ADAM12-202ENST00000368679 7938 ntAPPRIS P4 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBA52P62987 CTR9-201ENST00000361367 4586 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBA52P62987 AP4M1-201ENST00000359593 1817 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBA52P62987 DMTN-220ENST00000523266 2735 ntTSL 5 BASIC12.21□□□□□ -0.45
UBA52P62987 SAMD14-202ENST00000330175 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBA52P62987 PLIN3-207ENST00000592528 2154 ntTSL 2 BASIC12.21□□□□□ -0.45
UBA52P62987 RNF216-205ENST00000425013 5639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBA52P62987 LRRC6-205ENST00000519595 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBA52P62987 AHNAK-201ENST00000257247 1024 ntAPPRIS ALT2 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBA52P62987 B9D1-201ENST00000261499 908 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBA52P62987 ZBTB42-201ENST00000342537 3800 ntAPPRIS P1 BASIC12.21□□□□□ -0.45
UBA52P62987 CMC4-201ENST00000369479 864 ntAPPRIS P1 TSL 3 BASIC12.21□□□□□ -0.45
UBA52P62987 FKBP1B-201ENST00000380986 952 ntAPPRIS P1 TSL 1 (best) BASIC12.21□□□□□ -0.45
UBA52P62987 MAPK15-203ENST00000395108 765 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UBA52P62987 B9D1-203ENST00000395615 805 ntTSL 3 BASIC12.21□□□□□ -0.45
UBA52P62987 RAB1A-201ENST00000398529 1198 ntTSL 1 (best) BASIC12.21□□□□□ -0.45
UBA52P62987 TISP43-201ENST00000409793 538 ntTSL 4 BASIC12.21□□□□□ -0.45
UBA52P62987 AC004522.2-201ENST00000456499 680 ntTSL 3 BASIC12.21□□□□□ -0.45
UBA52P62987 PRPS2-205ENST00000489404 763 ntTSL 2 BASIC12.21□□□□□ -0.45
UBA52P62987 AC129492.3-201ENST00000498285 460 ntAPPRIS P1 TSL 4 BASIC12.21□□□□□ -0.45
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms