Protein–RNA interactions for Protein: P60507

ERVFC1, Endogenous retrovirus group FC1 Env polyprotein, humanhuman

Predictions only

Length 584 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERVFC1P60507 SLC7A8-214ENST00000621729 1371 ntTSL 5 BASIC14.53□□□□□ -0.08
ERVFC1P60507 GPR45-201ENST00000258456 1307 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
ERVFC1P60507 BPIFA4P-201ENST00000375465 1203 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 KCNE1-202ENST00000399284 666 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ERVFC1P60507 ATXN8OS-202ENST00000424524 1236 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 RIC3-205ENST00000425599 867 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 AC027612.2-201ENST00000436174 1145 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 AL773545.2-201ENST00000442149 472 ntBASIC14.53□□□□□ -0.08
ERVFC1P60507 TONSL-AS1-201ENST00000442850 428 ntTSL 5 BASIC14.53□□□□□ -0.08
ERVFC1P60507 Z82249.1-201ENST00000453866 568 ntTSL 4 BASIC14.53□□□□□ -0.08
ERVFC1P60507 AC098820.2-201ENST00000457694 666 ntTSL 5 BASIC14.53□□□□□ -0.08
ERVFC1P60507 AC022274.1-201ENST00000467082 490 ntTSL 5 BASIC14.53□□□□□ -0.08
ERVFC1P60507 ALG1L15P-201ENST00000482834 794 ntBASIC14.53□□□□□ -0.08
ERVFC1P60507 RNA5SP420-201ENST00000516997 137 ntBASIC14.53□□□□□ -0.08
ERVFC1P60507 NDRG1-209ENST00000518176 888 ntTSL 2 BASIC14.53□□□□□ -0.08
ERVFC1P60507 SRPK2P-201ENST00000523408 1100 ntBASIC14.53□□□□□ -0.08
ERVFC1P60507 AC004923.3-201ENST00000527532 355 ntBASIC14.53□□□□□ -0.08
ERVFC1P60507 AP003168.2-201ENST00000531215 471 ntTSL 3 BASIC14.53□□□□□ -0.08
ERVFC1P60507 SLC25A3-206ENST00000547534 556 ntTSL 2 BASIC14.53□□□□□ -0.08
ERVFC1P60507 LINC01490-202ENST00000551399 1260 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 AC007298.2-201ENST00000551849 862 ntTSL 3 BASIC14.53□□□□□ -0.08
ERVFC1P60507 AF111169.3-201ENST00000553991 756 ntTSL 5 BASIC14.53□□□□□ -0.08
ERVFC1P60507 ZFP1-207ENST00000567481 493 ntTSL 4 BASIC14.53□□□□□ -0.08
ERVFC1P60507 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC14.53□□□□□ -0.08
ERVFC1P60507 AC095350.1-204ENST00000585405 616 ntTSL 5 BASIC14.53□□□□□ -0.08
ERVFC1P60507 AC123912.6-201ENST00000612657 315 ntBASIC14.53□□□□□ -0.08
ERVFC1P60507 PDCD6-213ENST00000618970 931 ntTSL 3 BASIC14.53□□□□□ -0.08
ERVFC1P60507 AC245595.2-201ENST00000620141 1144 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 CRABP2-204ENST00000621784 1033 ntAPPRIS P1 TSL 3 BASIC14.53□□□□□ -0.08
ERVFC1P60507 LINC00969-253ENST00000625338 804 ntTSL 5 BASIC14.53□□□□□ -0.08
ERVFC1P60507 AC245369.7-201ENST00000631386 350 ntBASIC14.53□□□□□ -0.08
ERVFC1P60507 CHD1L-211ENST00000639534 1144 ntTSL 5 BASIC14.53□□□□□ -0.08
ERVFC1P60507 AL357143.1-203ENST00000639750 881 ntBASIC14.53□□□□□ -0.08
ERVFC1P60507 VARS2-211ENST00000541562 3566 ntTSL 2 BASIC14.53□□□□□ -0.08
ERVFC1P60507 TERF1-201ENST00000276602 3268 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 RAF1-205ENST00000442415 3085 ntTSL 5 BASIC14.53□□□□□ -0.08
ERVFC1P60507 HDAC7-209ENST00000427332 3016 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
ERVFC1P60507 CDH16-201ENST00000299752 2954 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 NTRK3-203ENST00000357724 2980 ntTSL 5 BASIC14.53□□□□□ -0.08
ERVFC1P60507 CNTNAP3-202ENST00000358144 4885 ntTSL 5 BASIC14.53□□□□□ -0.08
ERVFC1P60507 ARHGAP39-201ENST00000276826 4697 ntAPPRIS ALT2 TSL 2 BASIC14.53□□□□□ -0.08
ERVFC1P60507 RPP30-202ENST00000371703 2589 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 TMEM40-202ENST00000314124 2308 ntAPPRIS P3 TSL 2 BASIC14.53□□□□□ -0.08
ERVFC1P60507 EPOP-201ENST00000621654 3719 ntAPPRIS P1 BASIC14.53□□□□□ -0.08
ERVFC1P60507 OTUD3-201ENST00000375120 6397 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 BEND6-203ENST00000370748 3497 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
ERVFC1P60507 AC007686.3-201ENST00000619017 3487 ntBASIC14.53□□□□□ -0.08
ERVFC1P60507 NPY5R-203ENST00000515560 3183 ntAPPRIS P1 TSL 2 BASIC14.53□□□□□ -0.08
ERVFC1P60507 PRUNE1-205ENST00000368937 1850 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ERVFC1P60507 PRKD2-201ENST00000291281 3070 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
ERVFC1P60507 SOCS5-202ENST00000394861 4058 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ERVFC1P60507 ADAM15-204ENST00000359280 2874 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ERVFC1P60507 AC040160.2-201ENST00000623816 1675 ntBASIC14.52□□□□□ -0.08
ERVFC1P60507 PPP1R1B-203ENST00000394267 1504 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ERVFC1P60507 APP-208ENST00000439274 2517 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ERVFC1P60507 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
ERVFC1P60507 C10orf88-204ENST00000481909 2482 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ERVFC1P60507 APOBEC3A-201ENST00000249116 1444 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ERVFC1P60507 TMEM139-201ENST00000359333 2383 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ERVFC1P60507 PRKD2-202ENST00000433867 3321 ntAPPRIS P3 TSL 5 BASIC14.52□□□□□ -0.08
ERVFC1P60507 SUCLA2-205ENST00000470760 1445 ntTSL 2 BASIC14.52□□□□□ -0.08
ERVFC1P60507 TRO-225ENST00000622017 1403 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
ERVFC1P60507 SLC5A7-201ENST00000264047 5152 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ERVFC1P60507 SMG8-201ENST00000300917 3263 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ERVFC1P60507 KRT8P42-201ENST00000405771 1399 ntBASIC14.52□□□□□ -0.08
ERVFC1P60507 MICAL1-201ENST00000358577 3142 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
ERVFC1P60507 STRN3-201ENST00000355683 3970 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
ERVFC1P60507 SLC25A33-201ENST00000302692 3854 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
ERVFC1P60507 CHEK2-203ENST00000382565 696 ntTSL 5 BASIC14.52□□□□□ -0.09
ERVFC1P60507 REG3G-202ENST00000393897 856 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ERVFC1P60507 ATP5J-202ENST00000400087 826 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ERVFC1P60507 SNHG14-201ENST00000414175 610 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ERVFC1P60507 CORO1C-203ENST00000421578 1296 ntTSL 2 BASIC14.52□□□□□ -0.09
ERVFC1P60507 AC114812.1-201ENST00000421868 689 ntTSL 2 BASIC14.52□□□□□ -0.09
ERVFC1P60507 CDK4P1-201ENST00000454213 828 ntBASIC14.52□□□□□ -0.09
ERVFC1P60507 PEBP1P3-201ENST00000455475 548 ntBASIC14.52□□□□□ -0.09
ERVFC1P60507 EIF5A2-205ENST00000487522 565 ntTSL 3 BASIC14.52□□□□□ -0.09
ERVFC1P60507 EVX1-AS-203ENST00000519218 554 ntTSL 4 BASIC14.52□□□□□ -0.09
ERVFC1P60507 TIMM10-202ENST00000525158 530 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ERVFC1P60507 BLOC1S1-202ENST00000548556 525 ntTSL 2 BASIC14.52□□□□□ -0.09
ERVFC1P60507 AC010202.1-201ENST00000551181 405 ntBASIC14.52□□□□□ -0.09
ERVFC1P60507 AC132812.1-201ENST00000583145 892 ntBASIC14.52□□□□□ -0.09
ERVFC1P60507 KLKP1-202ENST00000597246 1125 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ERVFC1P60507 BAP1-211ENST00000615113 489 ntBASIC14.52□□□□□ -0.09
ERVFC1P60507 AC090510.3-201ENST00000615831 821 ntBASIC14.52□□□□□ -0.09
ERVFC1P60507 LINC02498-201ENST00000635390 1065 ntTSL 5 BASIC14.52□□□□□ -0.09
ERVFC1P60507 ITSN2-203ENST00000406921 4563 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
ERVFC1P60507 CDR2L-201ENST00000337231 3536 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
ERVFC1P60507 AL669918.1-201ENST00000452392 2705 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
ERVFC1P60507 MYH14-210ENST00000601313 6896 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
ERVFC1P60507 PPM1M-201ENST00000296487 2429 ntTSL 2 BASIC14.52□□□□□ -0.09
ERVFC1P60507 CICP16-201ENST00000502609 2813 ntBASIC14.51□□□□□ -0.09
ERVFC1P60507 MFSD14B-201ENST00000375344 3420 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 AL031056.1-202ENST00000635954 2193 ntTSL 5 BASIC14.51□□□□□ -0.09
ERVFC1P60507 MAP3K1-201ENST00000399503 7011 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 DDO-202ENST00000368924 2130 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 OS9-220ENST00000552285 2135 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 FUS-201ENST00000254108 5119 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
ERVFC1P60507 AC061965.1-201ENST00000560524 1465 ntBASIC14.51□□□□□ -0.09
ERVFC1P60507 DRC3-203ENST00000399187 2008 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 98,524 protein–RNA pairs in 81.4 ms